Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is yeaZ [H]

Identifier: 197119121

GI number: 197119121

Start: 3178346

End: 3179059

Strand: Reverse

Name: yeaZ [H]

Synonym: Gbem_2748

Alternate gene names: 197119121

Gene position: 3179059-3178346 (Counterclockwise)

Preceding gene: 197119122

Following gene: 197119120

Centisome position: 68.88

GC content: 65.83

Gene sequence:

>714_bases
GTGACGGCAGAGGAAAACGACGTGAAGATACTCACCATCGACACCTCCAGCAACTGCTCCTCCGTCTCCTTGAGCGACGG
CTCCACCCTTCTGGGCGAGTGCATCCTGGGCGAGGACCGTTCCAATTCCGGGCGCCTGCTGGAATCGGTCTCGGGCCTCT
TGAAGGCGGCCAAGCTTACCCCCGAGGGGCTCGACGCTTTCGCGGTCTCCCTAGGGCCTGGCTCCTTCACCGGGGTCCGG
GTCGGCATCGCCACGGTGAAGGGGCTTGCCCTGGCCACCGGGAAGCCCGTCGTCGGTTTCTCGTCGCTAGCCATGCTGGC
CATGAACCTTCCCTTCAGCTCCCACCCGGTGGCGCCCATGTACGACGCCCGCAAGGGCGAGGTGTACGCCGCGCTTTACC
GCTGCGGTTCGCTTCCCGAAACGCTCCGCTCTGACGCGGTTATAGGGCCGAAGGAGTTTCTTTCGGGGATCGTGAAGCCC
ACCATCTTCGTGGGCGACGGCGCCGTGCGCTACCGCGAACTGATCGTCTCGACCCTTGGGGAGCTCGCCATCTTTCCCCC
TTGGCACGCCAACCTCCCCCGAGCCTGCGCCGGTGCCGTCATCGCGCACGAGGCCGCGCTTTCCGGGAAGTTCACCCCGC
TTGCTTTGCTCAACCCCACCTACCTGCGCGCCTCCGAGGCGGAGATCGCCAAACGCCGCCGCGACGGACTTTAA

Upstream 100 bases:

>100_bases
GGGCCCGGGAGATCGCCCAGCAGGTTGGGCTCGTGCTCCTGATCGGCCTCATGATGCTCGCCTTCTACAACGACATCGCC
CGCATGTTCGCCCAAAAGGC

Downstream 100 bases:

>100_bases
CGCCGTTTGGTAGCTGTTGACAGTTCAGTTTTAATGTATTATGTTGTCCCTTCCTTCGTTCTCCTATAACCTCTCTTAAA
CACTCTGTTTTTGGCTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTAEENDVKILTIDTSSNCSSVSLSDGSTLLGECILGEDRSNSGRLLESVSGLLKAAKLTPEGLDAFAVSLGPGSFTGVR
VGIATVKGLALATGKPVVGFSSLAMLAMNLPFSSHPVAPMYDARKGEVYAALYRCGSLPETLRSDAVIGPKEFLSGIVKP
TIFVGDGAVRYRELIVSTLGELAIFPPWHANLPRACAGAVIAHEAALSGKFTPLALLNPTYLRASEAEIAKRRRDGL

Sequences:

>Translated_237_residues
MTAEENDVKILTIDTSSNCSSVSLSDGSTLLGECILGEDRSNSGRLLESVSGLLKAAKLTPEGLDAFAVSLGPGSFTGVR
VGIATVKGLALATGKPVVGFSSLAMLAMNLPFSSHPVAPMYDARKGEVYAALYRCGSLPETLRSDAVIGPKEFLSGIVKP
TIFVGDGAVRYRELIVSTLGELAIFPPWHANLPRACAGAVIAHEAALSGKFTPLALLNPTYLRASEAEIAKRRRDGL
>Mature_236_residues
TAEENDVKILTIDTSSNCSSVSLSDGSTLLGECILGEDRSNSGRLLESVSGLLKAAKLTPEGLDAFAVSLGPGSFTGVRV
GIATVKGLALATGKPVVGFSSLAMLAMNLPFSSHPVAPMYDARKGEVYAALYRCGSLPETLRSDAVIGPKEFLSGIVKPT
IFVGDGAVRYRELIVSTLGELAIFPPWHANLPRACAGAVIAHEAALSGKFTPLALLNPTYLRASEAEIAKRRRDGL

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=232, Percent_Identity=30.1724137931034, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 24804; Mature: 24673

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEENDVKILTIDTSSNCSSVSLSDGSTLLGECILGEDRSNSGRLLESVSGLLKAAKLT
CCCCCCCEEEEEEECCCCCCEEEECCCCHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCC
PEGLDAFAVSLGPGSFTGVRVGIATVKGLALATGKPVVGFSSLAMLAMNLPFSSHPVAPM
CCCCCEEEEEECCCCCCCEEEHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCC
YDARKGEVYAALYRCGSLPETLRSDAVIGPKEFLSGIVKPTIFVGDGAVRYRELIVSTLG
CCCCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH
ELAIFPPWHANLPRACAGAVIAHEAALSGKFTPLALLNPTYLRASEAEIAKRRRDGL
HHEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TAEENDVKILTIDTSSNCSSVSLSDGSTLLGECILGEDRSNSGRLLESVSGLLKAAKLT
CCCCCCEEEEEEECCCCCCEEEECCCCHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCC
PEGLDAFAVSLGPGSFTGVRVGIATVKGLALATGKPVVGFSSLAMLAMNLPFSSHPVAPM
CCCCCEEEEEECCCCCCCEEEHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCC
YDARKGEVYAALYRCGSLPETLRSDAVIGPKEFLSGIVKPTIFVGDGAVRYRELIVSTLG
CCCCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH
ELAIFPPWHANLPRACAGAVIAHEAALSGKFTPLALLNPTYLRASEAEIAKRRRDGL
HHEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]