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The map label for this gene is pqqL [C]

Identifier: 197119103

GI number: 197119103

Start: 3157157

End: 3158431

Strand: Reverse

Name: pqqL [C]

Synonym: Gbem_2730

Alternate gene names: 197119103

Gene position: 3158431-3157157 (Counterclockwise)

Preceding gene: 197119104

Following gene: 197119099

Centisome position: 68.44

GC content: 64.39

Gene sequence:

>1275_bases
ATGTCGACCACACAAAGTACTCCCCAGGTGCGCATGACCACCCTTTCCAACGGGATCCGGGTGGTGAGCCAGCAGATCCC
CGGCATGCAGAGCGCCGCGGTCGGGATCAGGAACGACAGCAGCACGAGGAACGAGCCGGCCGATTGCGCCGGGGCCTCCC
ATTTCATAGAGCACCTCCTCTTCAAGGGGACGCCTACCCGTAGCGCCGACCAGATCACCGACGAGTTCAACAGCATAGGC
GCCCGGGCCAACGCCTATACCAGCCAGGAGGAGGTTTTCTACTACGCCGTCGCGCTCGCCTCGATCATCCCGGCGACCTT
CGACATCCTAGCCGACATGTTCGTCAACTCCTGGCTTCCCGAGACGGAGGTGGAGAAGGAGCGCGCCGTGGTGCTGCAGG
AGATCCTGATGAACCAGGACACCCCGAGCCGCTTCATCTACAACCAGTTCCACCTGGGATTCTGGCAGGGGCATCCTCTT
GGCTCCCCCATCCTCGGCACCTCGGAGAGCATCGGGGCCATCGAAAGGAACCGCCTGATGGATTACAAGCTCTCCAACTA
CCTATCCAGCGCCACCATAGTCTCGGTCGCGGGGAACGTGGAGCACGACCGGATGGTGGAGCAGGCCGACCGCGCCCTGG
GGGCGCTTCCGACCGGATCGCCGCAGGTGAAACAGCAGGAGCAGGGGTGGCAAAGCGCCATAGGGGAGAACAGGCATTTC
CCGCGCCCACTGGAGCAGACCCTCTTTTACATGGGGTATCCGCTGCCGCCGGCGGGGAACCAGCATCGCCACAAACTGGC
CGTGTTCAACCAGATCCTCGGCACCGGAATGAACTCGCGCCTGTTCCGCGAGGTCCGCGAGCGGCGCAGCCTTGCCTACA
CGGTCTATTCCATGATGTCCTCCTACACGGATTCCGCGGCACTGATGATCTACGCCGGGACCAGCGCGGACCGGGCCCAG
GAGGCGGTCGACGTCTGCCACGGCGAGGTGATGAGGTTTTGCGAGGAGAAGGTGAGCGAGGAGATGCTTGCTGCCGCCAA
GGAGCAGATACGCTCTGCGCGCCTCATGGCCCTTGACGACTGCGAGACCCAGGTGCGCAGGATCTCCAACACCACCTCAT
TGCTGGGTGCGCCCGAGCCGGTGGGAGTCTCGCTGGAGGCTATCGCCGCCGTTACCGCGGAGGAGGTGAGGGACATGGCG
CGGCTTCTGTTTGCTGACGTGGTGCCGCGGGTCGAGTCGGTGGGGTCGGGGGAAGGGCCGGGGCTGCCGTGCTAG

Upstream 100 bases:

>100_bases
GCTGAAGCCCGGCGGGGGAGGACGCTTCTAGCCCCAAACAACATGCTATAATTGCGCCCAGCCAAACTGGAGCGATTTCC
ACAGCTTTCAAGGAGCAACC

Downstream 100 bases:

>100_bases
CCCCTTTCTCTTCAACCAGCAACCCCCTCCATTCCGGAGGGGGTTGTTTTTTGCCCGGCGTACGGGGCTCAGCTCAGCTC
ATCTCGTCTTCGCCGCCGGA

Product: zinc-dependent peptidase M16 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MSTTQSTPQVRMTTLSNGIRVVSQQIPGMQSAAVGIRNDSSTRNEPADCAGASHFIEHLLFKGTPTRSADQITDEFNSIG
ARANAYTSQEEVFYYAVALASIIPATFDILADMFVNSWLPETEVEKERAVVLQEILMNQDTPSRFIYNQFHLGFWQGHPL
GSPILGTSESIGAIERNRLMDYKLSNYLSSATIVSVAGNVEHDRMVEQADRALGALPTGSPQVKQQEQGWQSAIGENRHF
PRPLEQTLFYMGYPLPPAGNQHRHKLAVFNQILGTGMNSRLFREVRERRSLAYTVYSMMSSYTDSAALMIYAGTSADRAQ
EAVDVCHGEVMRFCEEKVSEEMLAAAKEQIRSARLMALDDCETQVRRISNTTSLLGAPEPVGVSLEAIAAVTAEEVRDMA
RLLFADVVPRVESVGSGEGPGLPC

Sequences:

>Translated_424_residues
MSTTQSTPQVRMTTLSNGIRVVSQQIPGMQSAAVGIRNDSSTRNEPADCAGASHFIEHLLFKGTPTRSADQITDEFNSIG
ARANAYTSQEEVFYYAVALASIIPATFDILADMFVNSWLPETEVEKERAVVLQEILMNQDTPSRFIYNQFHLGFWQGHPL
GSPILGTSESIGAIERNRLMDYKLSNYLSSATIVSVAGNVEHDRMVEQADRALGALPTGSPQVKQQEQGWQSAIGENRHF
PRPLEQTLFYMGYPLPPAGNQHRHKLAVFNQILGTGMNSRLFREVRERRSLAYTVYSMMSSYTDSAALMIYAGTSADRAQ
EAVDVCHGEVMRFCEEKVSEEMLAAAKEQIRSARLMALDDCETQVRRISNTTSLLGAPEPVGVSLEAIAAVTAEEVRDMA
RLLFADVVPRVESVGSGEGPGLPC
>Mature_423_residues
STTQSTPQVRMTTLSNGIRVVSQQIPGMQSAAVGIRNDSSTRNEPADCAGASHFIEHLLFKGTPTRSADQITDEFNSIGA
RANAYTSQEEVFYYAVALASIIPATFDILADMFVNSWLPETEVEKERAVVLQEILMNQDTPSRFIYNQFHLGFWQGHPLG
SPILGTSESIGAIERNRLMDYKLSNYLSSATIVSVAGNVEHDRMVEQADRALGALPTGSPQVKQQEQGWQSAIGENRHFP
RPLEQTLFYMGYPLPPAGNQHRHKLAVFNQILGTGMNSRLFREVRERRSLAYTVYSMMSSYTDSAALMIYAGTSADRAQE
AVDVCHGEVMRFCEEKVSEEMLAAAKEQIRSARLMALDDCETQVRRISNTTSLLGAPEPVGVSLEAIAAVTAEEVRDMAR
LLFADVVPRVESVGSGEGPGLPC

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Homo sapiens, GI94538354, Length=430, Percent_Identity=28.6046511627907, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI46593007, Length=427, Percent_Identity=27.1662763466042, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI24308013, Length=383, Percent_Identity=26.6318537859008, Blast_Score=91, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71999683, Length=420, Percent_Identity=26.9047619047619, Blast_Score=144, Evalue=9e-35,
Organism=Caenorhabditis elegans, GI17553678, Length=361, Percent_Identity=27.7008310249307, Blast_Score=126, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6323192, Length=416, Percent_Identity=30.2884615384615, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6321813, Length=435, Percent_Identity=22.0689655172414, Blast_Score=109, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6319426, Length=236, Percent_Identity=23.3050847457627, Blast_Score=63, Evalue=7e-11,
Organism=Drosophila melanogaster, GI21357875, Length=424, Percent_Identity=29.7169811320755, Blast_Score=168, Evalue=7e-42,
Organism=Drosophila melanogaster, GI24646943, Length=424, Percent_Identity=29.7169811320755, Blast_Score=168, Evalue=7e-42,
Organism=Drosophila melanogaster, GI19921772, Length=437, Percent_Identity=25.4004576659039, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR001431
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 46635; Mature: 46504

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTQSTPQVRMTTLSNGIRVVSQQIPGMQSAAVGIRNDSSTRNEPADCAGASHFIEHLL
CCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCCCCHHHCHHHHHHHHHH
FKGTPTRSADQITDEFNSIGARANAYTSQEEVFYYAVALASIIPATFDILADMFVNSWLP
HCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ETEVEKERAVVLQEILMNQDTPSRFIYNQFHLGFWQGHPLGSPILGTSESIGAIERNRLM
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHH
DYKLSNYLSSATIVSVAGNVEHDRMVEQADRALGALPTGSPQVKQQEQGWQSAIGENRHF
HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC
PRPLEQTLFYMGYPLPPAGNQHRHKLAVFNQILGTGMNSRLFREVRERRSLAYTVYSMMS
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SYTDSAALMIYAGTSADRAQEAVDVCHGEVMRFCEEKVSEEMLAAAKEQIRSARLMALDD
HCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CETQVRRISNTTSLLGAPEPVGVSLEAIAAVTAEEVRDMARLLFADVVPRVESVGSGEGP
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GLPC
CCCC
>Mature Secondary Structure 
STTQSTPQVRMTTLSNGIRVVSQQIPGMQSAAVGIRNDSSTRNEPADCAGASHFIEHLL
CCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCCCCHHHCHHHHHHHHHH
FKGTPTRSADQITDEFNSIGARANAYTSQEEVFYYAVALASIIPATFDILADMFVNSWLP
HCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ETEVEKERAVVLQEILMNQDTPSRFIYNQFHLGFWQGHPLGSPILGTSESIGAIERNRLM
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHH
DYKLSNYLSSATIVSVAGNVEHDRMVEQADRALGALPTGSPQVKQQEQGWQSAIGENRHF
HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC
PRPLEQTLFYMGYPLPPAGNQHRHKLAVFNQILGTGMNSRLFREVRERRSLAYTVYSMMS
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SYTDSAALMIYAGTSADRAQEAVDVCHGEVMRFCEEKVSEEMLAAAKEQIRSARLMALDD
HCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CETQVRRISNTTSLLGAPEPVGVSLEAIAAVTAEEVRDMARLLFADVVPRVESVGSGEGP
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GLPC
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA