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The map label for this gene is ybhP [H]

Identifier: 197119100

GI number: 197119100

Start: 3154574

End: 3155314

Strand: Direct

Name: ybhP [H]

Synonym: Gbem_2727

Alternate gene names: 197119100

Gene position: 3154574-3155314 (Clockwise)

Preceding gene: 197119098

Following gene: 197119101

Centisome position: 68.35

GC content: 63.7

Gene sequence:

>741_bases
ATGTCACGTACCTTTTCCGTAATGACCTACAACGTCCACAGCTGTATTGGCACGGACCGCCAGCTTTCACCGCTCAGGAT
CGCCGAGGTGATCGACCGGTGCAACCCGGACATCGTCGCGCTGCAGGAACTCGACGCAGGGCTGCCGCGCACCGAGATGA
TCGACCAGGCGCACCTGATAGCCATGACCCTTGAAATGTCGTTCCATTTCCATTCCTCCATACATCTGAAAGAAGGGGGG
TACGGCAACGCCATCCTGAGCCGCTCCCCGGTGCAGCTGATCAAGGCAGGCGCCGTTCCTACCGACCCGTTGCACCCATC
CTTTGAGCGCCGGGGGGCGCTCTGGGCGGAGGTGGAGCTGCATGGCGTGAAGATCCAGGTACTGGCCACGCACTTCGGGC
TGAACCGCGGCGAACGGGTACGCCAGGCCAGGGCCGTCACCGGCCCCGAATGGCTCGGCCACCCCGAGTGCCTGCCTCCG
GCGGTTCTCTGCGGCGACTTCAACGCCCTCTTCGGCTCATCGGTGTACCGGCTCCTTACCCGGCAACTGCATGACGTGCA
GCGCAAGGTTAAGGGGCGCCTCCCCCGGGGGACCTGGCCCGCCCAACTCCCCTTCATGCGCATCGACCACCTGTTCGTCA
CTCATAACCTCAAGGTTCGCAGTGTCAGCGTGCCGAGAAACCCGTTAACCCGGGTCGCCTCGGATCACCTGCCGCTGGTT
GTCACGCTGGAGCTGCCATGA

Upstream 100 bases:

>100_bases
TCCTGCTGGGTACCCTATAAAAGTTTTTAATACTATATAAATTGCGCTCTCCTGCAAGAAACCTTCAGGACGAGCGGGGA
CCGGCGATGCGAGCCCACCC

Downstream 100 bases:

>100_bases
GCGTCTTGAAGCCGGGCCAGAACTGCATGGGGATCTATGAGGCCGACAGCACCGGCGTGCTGGTGGATGCTTGCGATTAC
TATCGTGCCTTCTACCACAC

Product: metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSRTFSVMTYNVHSCIGTDRQLSPLRIAEVIDRCNPDIVALQELDAGLPRTEMIDQAHLIAMTLEMSFHFHSSIHLKEGG
YGNAILSRSPVQLIKAGAVPTDPLHPSFERRGALWAEVELHGVKIQVLATHFGLNRGERVRQARAVTGPEWLGHPECLPP
AVLCGDFNALFGSSVYRLLTRQLHDVQRKVKGRLPRGTWPAQLPFMRIDHLFVTHNLKVRSVSVPRNPLTRVASDHLPLV
VTLELP

Sequences:

>Translated_246_residues
MSRTFSVMTYNVHSCIGTDRQLSPLRIAEVIDRCNPDIVALQELDAGLPRTEMIDQAHLIAMTLEMSFHFHSSIHLKEGG
YGNAILSRSPVQLIKAGAVPTDPLHPSFERRGALWAEVELHGVKIQVLATHFGLNRGERVRQARAVTGPEWLGHPECLPP
AVLCGDFNALFGSSVYRLLTRQLHDVQRKVKGRLPRGTWPAQLPFMRIDHLFVTHNLKVRSVSVPRNPLTRVASDHLPLV
VTLELP
>Mature_245_residues
SRTFSVMTYNVHSCIGTDRQLSPLRIAEVIDRCNPDIVALQELDAGLPRTEMIDQAHLIAMTLEMSFHFHSSIHLKEGGY
GNAILSRSPVQLIKAGAVPTDPLHPSFERRGALWAEVELHGVKIQVLATHFGLNRGERVRQARAVTGPEWLGHPECLPPA
VLCGDFNALFGSSVYRLLTRQLHDVQRKVKGRLPRGTWPAQLPFMRIDHLFVTHNLKVRSVSVPRNPLTRVASDHLPLVV
TLELP

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=256, Percent_Identity=29.296875, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 27498; Mature: 27367

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTFSVMTYNVHSCIGTDRQLSPLRIAEVIDRCNPDIVALQELDAGLPRTEMIDQAHLI
CCCEEEEEEEEHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHHEEE
AMTLEMSFHFHSSIHLKEGGYGNAILSRSPVQLIKAGAVPTDPLHPSFERRGALWAEVEL
EEEEEEEEEECCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHCCCEEEEEEE
HGVKIQVLATHFGLNRGERVRQARAVTGPEWLGHPECLPPAVLCGDFNALFGSSVYRLLT
ECEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHH
RQLHDVQRKVKGRLPRGTWPAQLPFMRIDHLFVTHNLKVRSVSVPRNPLTRVASDHLPLV
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECEEEEEEECCCCHHHHHHCCCCCEE
VTLELP
EEEECC
>Mature Secondary Structure 
SRTFSVMTYNVHSCIGTDRQLSPLRIAEVIDRCNPDIVALQELDAGLPRTEMIDQAHLI
CCEEEEEEEEHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHHEEE
AMTLEMSFHFHSSIHLKEGGYGNAILSRSPVQLIKAGAVPTDPLHPSFERRGALWAEVEL
EEEEEEEEEECCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHCCCEEEEEEE
HGVKIQVLATHFGLNRGERVRQARAVTGPEWLGHPECLPPAVLCGDFNALFGSSVYRLLT
ECEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHH
RQLHDVQRKVKGRLPRGTWPAQLPFMRIDHLFVTHNLKVRSVSVPRNPLTRVASDHLPLV
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECEEEEEEECCCCHHHHHHCCCCCEE
VTLELP
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]