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The map label for this gene is ywbD [H]

Identifier: 197119075

GI number: 197119075

Start: 3119626

End: 3120825

Strand: Reverse

Name: ywbD [H]

Synonym: Gbem_2702

Alternate gene names: 197119075

Gene position: 3120825-3119626 (Counterclockwise)

Preceding gene: 197119076

Following gene: 197119073

Centisome position: 67.62

GC content: 63.5

Gene sequence:

>1200_bases
ATGTCGAAAGCATGCACGGTTGGGCCGGAATCGGTACGGATGATTGAGCTCGGGCACCCCTGGATCATCGCCGACAGCTA
CACCAAAAAGTGGCCGGCGGGCGAGACCGGCGACCTGGTGGAACTGGTGGACCCTTCGGGGCGCTTCCTGGCCCAGGCGC
TATTGGATCCCAAGGACCGGATCGTCGCGCGGGTGCTGTCGCGGGAACGGATGCGCCTGGACCGGGGCTGGGTGAAGGAG
CGGCTGCAAAGGGCGATAGCGATGCGAAGAGACCATGCCGGGCTCGTCGACACCGACGCCTATCGTCTGGTCAACGGCGA
GGGGGACCTCCTTCCCGGGATCACGGTAGATCACTACGGTGATTACCTGATGGTGCAGATCTACTGCTCCGGTTGGCGCA
GGCACCTGAAGCTGGTAACCCAGGCGCTCGATGAGTTGCTGGAGCCGGCCGGGATCTACGAGAAGAGCCGCCCCCAGAAC
ACCCGGGAGCTGGAATCGGGTGGGGAGGGGAAGAAATACGGGCAGCTCCTCTCGGGCAAACCCGCTCCGGAACCGCTCGT
GGTGCTGGAGAACGGGCTCAGCTTCCAGGTGAGCCTGGAGCGCGGCCTTAACACCGGGTTGTTCCTCGACCAGCGCAAGA
ACCGGCGCGACCTGATGGCGCGGGTGCAGGGGAAGCGCTTTTTGAACCTCTTCAGCTATACCGGCGCCTTCTCCGTCGCC
GCAGCAGCGGCAGGCGCAAGCCTTGTCACCAGCGTCGACGCTTCGCCCGGCTACATGGAACAGGCCCGCTCCAACTTCAG
CGTCAACCGGCTGAACCCCAAACGGCACGAGTTCCTGGTTGGGGACTGCCTGACCGTGCTCGACGATCTGGCGCGGCAAA
AGAAATGCTACGACGTGGTTCTCATGGACCCGCCGTCTTTTTCCACCACGTCCAAGAGCCGCTTCACCACGCGCGGCGGG
ACCGCTGACCTGGTTGCCGCCGCTATGAAATTGTTGAAAGGGGGAGGGTTGCTGATCGCTTCCTCGAACCATCAGAAGGT
GGATCTTGCCGATTACCTGAAGGAATTGCGCCGCGGCGCGCTTCAGGCGGGGGGGACGTTGCAGGTGGTGTCGCTATCGG
GTCAGCCGGAGGACTTCCCGTACCCGGTCACTTTCCCGGAGGGGCGCTATCTCAAGTACGCGATCTGCGTAAAGGGGTAG

Upstream 100 bases:

>100_bases
AGCGGATAACGGCAGATTAAGCCAGAGCAGGTGGTTTTGATTGATCCGCGTCTTCCGCGTGCGATGCCCCTTAGCTTTTT
TGAGTTTTTCAGAGGATAAG

Downstream 100 bases:

>100_bases
AGCCGCGGGAAGCGCGCCGTATCAGCTCACCCCGCAGCCGTGCAGGTGCTTGCAGTAGCGCTTGTCGGTCAGTTCGATAT
GGTTTAATACCCAACTGGAC

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSKACTVGPESVRMIELGHPWIIADSYTKKWPAGETGDLVELVDPSGRFLAQALLDPKDRIVARVLSRERMRLDRGWVKE
RLQRAIAMRRDHAGLVDTDAYRLVNGEGDLLPGITVDHYGDYLMVQIYCSGWRRHLKLVTQALDELLEPAGIYEKSRPQN
TRELESGGEGKKYGQLLSGKPAPEPLVVLENGLSFQVSLERGLNTGLFLDQRKNRRDLMARVQGKRFLNLFSYTGAFSVA
AAAAGASLVTSVDASPGYMEQARSNFSVNRLNPKRHEFLVGDCLTVLDDLARQKKCYDVVLMDPPSFSTTSKSRFTTRGG
TADLVAAAMKLLKGGGLLIASSNHQKVDLADYLKELRRGALQAGGTLQVVSLSGQPEDFPYPVTFPEGRYLKYAICVKG

Sequences:

>Translated_399_residues
MSKACTVGPESVRMIELGHPWIIADSYTKKWPAGETGDLVELVDPSGRFLAQALLDPKDRIVARVLSRERMRLDRGWVKE
RLQRAIAMRRDHAGLVDTDAYRLVNGEGDLLPGITVDHYGDYLMVQIYCSGWRRHLKLVTQALDELLEPAGIYEKSRPQN
TRELESGGEGKKYGQLLSGKPAPEPLVVLENGLSFQVSLERGLNTGLFLDQRKNRRDLMARVQGKRFLNLFSYTGAFSVA
AAAAGASLVTSVDASPGYMEQARSNFSVNRLNPKRHEFLVGDCLTVLDDLARQKKCYDVVLMDPPSFSTTSKSRFTTRGG
TADLVAAAMKLLKGGGLLIASSNHQKVDLADYLKELRRGALQAGGTLQVVSLSGQPEDFPYPVTFPEGRYLKYAICVKG
>Mature_398_residues
SKACTVGPESVRMIELGHPWIIADSYTKKWPAGETGDLVELVDPSGRFLAQALLDPKDRIVARVLSRERMRLDRGWVKER
LQRAIAMRRDHAGLVDTDAYRLVNGEGDLLPGITVDHYGDYLMVQIYCSGWRRHLKLVTQALDELLEPAGIYEKSRPQNT
RELESGGEGKKYGQLLSGKPAPEPLVVLENGLSFQVSLERGLNTGLFLDQRKNRRDLMARVQGKRFLNLFSYTGAFSVAA
AAAGASLVTSVDASPGYMEQARSNFSVNRLNPKRHEFLVGDCLTVLDDLARQKKCYDVVLMDPPSFSTTSKSRFTTRGGT
ADLVAAAMKLLKGGGLLIASSNHQKVDLADYLKELRRGALQAGGTLQVVSLSGQPEDFPYPVTFPEGRYLKYAICVKG

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=383, Percent_Identity=32.1148825065274, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1787181, Length=253, Percent_Identity=33.9920948616601, Blast_Score=112, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 44065; Mature: 43934

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKACTVGPESVRMIELGHPWIIADSYTKKWPAGETGDLVELVDPSGRFLAQALLDPKDR
CCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCHHH
IVARVLSRERMRLDRGWVKERLQRAIAMRRDHAGLVDTDAYRLVNGEGDLLPGITVDHYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCCCCHHCCC
DYLMVQIYCSGWRRHLKLVTQALDELLEPAGIYEKSRPQNTRELESGGEGKKYGQLLSGK
CEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCC
PAPEPLVVLENGLSFQVSLERGLNTGLFLDQRKNRRDLMARVQGKRFLNLFSYTGAFSVA
CCCCCEEEEECCCEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
AAAAGASLVTSVDASPGYMEQARSNFSVNRLNPKRHEFLVGDCLTVLDDLARQKKCYDVV
HHHCCCHHEEECCCCCCHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEE
LMDPPSFSTTSKSRFTTRGGTADLVAAAMKLLKGGGLLIASSNHQKVDLADYLKELRRGA
EECCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEECCCCCEECHHHHHHHHHHHH
LQAGGTLQVVSLSGQPEDFPYPVTFPEGRYLKYAICVKG
HCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
SKACTVGPESVRMIELGHPWIIADSYTKKWPAGETGDLVELVDPSGRFLAQALLDPKDR
CCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCHHH
IVARVLSRERMRLDRGWVKERLQRAIAMRRDHAGLVDTDAYRLVNGEGDLLPGITVDHYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCCCCHHCCC
DYLMVQIYCSGWRRHLKLVTQALDELLEPAGIYEKSRPQNTRELESGGEGKKYGQLLSGK
CEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCC
PAPEPLVVLENGLSFQVSLERGLNTGLFLDQRKNRRDLMARVQGKRFLNLFSYTGAFSVA
CCCCCEEEEECCCEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
AAAAGASLVTSVDASPGYMEQARSNFSVNRLNPKRHEFLVGDCLTVLDDLARQKKCYDVV
HHHCCCHHEEECCCCCCHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEE
LMDPPSFSTTSKSRFTTRGGTADLVAAAMKLLKGGGLLIASSNHQKVDLADYLKELRRGA
EECCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEECCCCCEECHHHHHHHHHHHH
LQAGGTLQVVSLSGQPEDFPYPVTFPEGRYLKYAICVKG
HCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]