Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119073

Identifier: 197119073

GI number: 197119073

Start: 3118498

End: 3119094

Strand: Reverse

Name: 197119073

Synonym: Gbem_2700

Alternate gene names: NA

Gene position: 3119094-3118498 (Counterclockwise)

Preceding gene: 197119075

Following gene: 308535316

Centisome position: 67.58

GC content: 61.64

Gene sequence:

>597_bases
ATGTCAAAGCCCGAAGAAGACGAGCTGCAGATCGCCTGCCAGCAGATCCTGCTCCCTGACGCGTCGGTGTTCTCGGTGCA
GTGGGTGGACCTGTCTCTCCCGGCCGGTTCCCGTGTCTGCGCGAAGCTGTTGCTGGAGCAGTACTTCAAGTCGATCAGGC
GCTACACCCTCGGGCTGGTTCGTCCCGCCGTAAGCATCGACGGGGTCCATTTCCGGGTCATGTCGACGCGCTTCGCGCTT
CTTTCCTTCGAGCCCGCAAGGTACGAGGCTGACGGGGAGCTGGAAGCGGTTCATCTCTATATCAACGGCGGCTTCCTGGT
GCAGGCGGGGGAGTGCGGCAGGGGGATGTTTTCCCTCTTGGCGCAAACCCGTCCCGACGGGCTCCGCGTCACCGTCGAGC
TTTCCGACTACTGCCCGCTCCTTCTCGGGAGCAACACCCCCTCCAAGTTGCGCAAACTCTTCTACGGCCTCACCCAGTCC
TACTTTCACAAAGTGGTGACGGTGAAATACCTCTTCCACCTCCACCGTTTCCTTACCGGCGCCAAACAGCGCGCCCGGGT
CAAAAAGGTCCAGGTGCGTCAGGGCACGGACATCTGA

Upstream 100 bases:

>100_bases
ATCTCTCCCTTTATTGCGCATGCGTCTGTCTATCTGTGGCGACCGGCAGCACTGCGTGTTATGTTAGACGGCAGTTTCAT
AGTCCCTACCGGAGCGTGTG

Downstream 100 bases:

>100_bases
CCTACTATCTTTTCGGTGATCGACTCTGCTACTTGAGGGATTTAACAGTGGCGGGGGCTAATGTGGGAAAGGATGGAAAA
GGGGACAGGCTACTTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSKPEEDELQIACQQILLPDASVFSVQWVDLSLPAGSRVCAKLLLEQYFKSIRRYTLGLVRPAVSIDGVHFRVMSTRFAL
LSFEPARYEADGELEAVHLYINGGFLVQAGECGRGMFSLLAQTRPDGLRVTVELSDYCPLLLGSNTPSKLRKLFYGLTQS
YFHKVVTVKYLFHLHRFLTGAKQRARVKKVQVRQGTDI

Sequences:

>Translated_198_residues
MSKPEEDELQIACQQILLPDASVFSVQWVDLSLPAGSRVCAKLLLEQYFKSIRRYTLGLVRPAVSIDGVHFRVMSTRFAL
LSFEPARYEADGELEAVHLYINGGFLVQAGECGRGMFSLLAQTRPDGLRVTVELSDYCPLLLGSNTPSKLRKLFYGLTQS
YFHKVVTVKYLFHLHRFLTGAKQRARVKKVQVRQGTDI
>Mature_197_residues
SKPEEDELQIACQQILLPDASVFSVQWVDLSLPAGSRVCAKLLLEQYFKSIRRYTLGLVRPAVSIDGVHFRVMSTRFALL
SFEPARYEADGELEAVHLYINGGFLVQAGECGRGMFSLLAQTRPDGLRVTVELSDYCPLLLGSNTPSKLRKLFYGLTQSY
FHKVVTVKYLFHLHRFLTGAKQRARVKKVQVRQGTDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22355; Mature: 22224

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPEEDELQIACQQILLPDASVFSVQWVDLSLPAGSRVCAKLLLEQYFKSIRRYTLGLV
CCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
RPAVSIDGVHFRVMSTRFALLSFEPARYEADGELEAVHLYINGGFLVQAGECGRGMFSLL
CCCCEECCEEEEEEHHEEEEEECCCCCCCCCCCEEEEEEEEECCEEEECCCCCHHHHHHH
AQTRPDGLRVTVELSDYCPLLLGSNTPSKLRKLFYGLTQSYFHKVVTVKYLFHLHRFLTG
HHCCCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKQRARVKKVQVRQGTDI
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SKPEEDELQIACQQILLPDASVFSVQWVDLSLPAGSRVCAKLLLEQYFKSIRRYTLGLV
CCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
RPAVSIDGVHFRVMSTRFALLSFEPARYEADGELEAVHLYINGGFLVQAGECGRGMFSLL
CCCCEECCEEEEEEHHEEEEEECCCCCCCCCCCEEEEEEEEECCEEEECCCCCHHHHHHH
AQTRPDGLRVTVELSDYCPLLLGSNTPSKLRKLFYGLTQSYFHKVVTVKYLFHLHRFLTG
HHCCCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKQRARVKKVQVRQGTDI
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA