| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is argK [C]
Identifier: 197119065
GI number: 197119065
Start: 3112458
End: 3113402
Strand: Reverse
Name: argK [C]
Synonym: Gbem_2690
Alternate gene names: 197119065
Gene position: 3113402-3112458 (Counterclockwise)
Preceding gene: 197119066
Following gene: 197119064
Centisome position: 67.46
GC content: 63.28
Gene sequence:
>945_bases ATGAGCCTTGCCGAACGTGTGCTGGATGGCGAGATACGCGCCGCGGCGCGCCTGATGCGGGATATCGACGACCGTTTCAA AAGCGCCGTCGACGAACTGAAGATCCTCTACCCCCATACCGGAAAAGCCTATATCATCGGCATCACCGGCCCGCCTGGCG CCGGCAAGTCGACCCTCGTCGACCAGGTAGTCGCGGCCTACCGCAAGAAGGACCTCCTGGTGGGTGTGGTGGCGATCGAC CCGACCAGCCCTTTTTCCGGCGGCGCCATCCTGGGTGACCGCATCCGCATGAACCGCCATGCCGACGACCCCGGCGTCTT CATCAGGAGTCTCGCCACACGCGGCGCCCTGGGAGGGCTTTCGCGCTCTACCATGGACGTGCTCAACGTGATGGACGCGA TGGGGCTCGACGTCATCGTGGTGGAAACGGTCGGGGTAGGGCAGGACGAGGTCGACATCGTCAGCACCGCGCACACCACC GTGGTGGTCATGGTCCCGGGTCTGGGAGACGATATCCAGGCGATCAAGGCCGGCATCCTCGAAATCGGGGACGTCTTCGT GGTCAACAAGGCGGACCGGGACGGCGCCGAGCGGACTGAGCGCGAACTGACCGCGATGCTCGAGATGAAGCACCCCGAGC CCGGCGACTGGATGCCGCACGTGATCAAGACCGAGGCGGCCAAAGGGCTCGGCATCGACCAACTGGTGGATGAATTCGAG GCGCACCACAGCTACCTCAAGGAGTCGGGCGCGCTGCAGCGCCTGATCCAGGAACGAAATGCCAAGATCTTCGCGGACAC GCTGCGCGAGGAACTCTTCGAGTCAGTCTTCAGCGGCATAAAGGAAAGCGGGAAGTACCAGCAGATACTCGACGGCATGC GCGACAGGAGCACCGATCCCTACAGCGCTGTGGAAGAGGTCATGGCTGCGCGCTCTTTTTCTTGA
Upstream 100 bases:
>100_bases CACAGGCAGTTCGCGGCGCACCCGCGTAGAAGCCTGGAGAGACCCTGCGGCAACGTGTGGCAAGGCCTCTCCGATCATAT ATGAATTCTGGAGTTGAAAC
Downstream 100 bases:
>100_bases CCCTGGGACCTAAAGATGTTAATTAGAAGGCGAAATGGGGCGTAGGCCCCATTAGTCGTTTCTGGTCGGGAGTTGTCGAG ATGTTTCGTAAGATACTGTT
Product: protein kinase, ArgK family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MSLAERVLDGEIRAAARLMRDIDDRFKSAVDELKILYPHTGKAYIIGITGPPGAGKSTLVDQVVAAYRKKDLLVGVVAID PTSPFSGGAILGDRIRMNRHADDPGVFIRSLATRGALGGLSRSTMDVLNVMDAMGLDVIVVETVGVGQDEVDIVSTAHTT VVVMVPGLGDDIQAIKAGILEIGDVFVVNKADRDGAERTERELTAMLEMKHPEPGDWMPHVIKTEAAKGLGIDQLVDEFE AHHSYLKESGALQRLIQERNAKIFADTLREELFESVFSGIKESGKYQQILDGMRDRSTDPYSAVEEVMAARSFS
Sequences:
>Translated_314_residues MSLAERVLDGEIRAAARLMRDIDDRFKSAVDELKILYPHTGKAYIIGITGPPGAGKSTLVDQVVAAYRKKDLLVGVVAID PTSPFSGGAILGDRIRMNRHADDPGVFIRSLATRGALGGLSRSTMDVLNVMDAMGLDVIVVETVGVGQDEVDIVSTAHTT VVVMVPGLGDDIQAIKAGILEIGDVFVVNKADRDGAERTERELTAMLEMKHPEPGDWMPHVIKTEAAKGLGIDQLVDEFE AHHSYLKESGALQRLIQERNAKIFADTLREELFESVFSGIKESGKYQQILDGMRDRSTDPYSAVEEVMAARSFS >Mature_313_residues SLAERVLDGEIRAAARLMRDIDDRFKSAVDELKILYPHTGKAYIIGITGPPGAGKSTLVDQVVAAYRKKDLLVGVVAIDP TSPFSGGAILGDRIRMNRHADDPGVFIRSLATRGALGGLSRSTMDVLNVMDAMGLDVIVVETVGVGQDEVDIVSTAHTTV VVMVPGLGDDIQAIKAGILEIGDVFVVNKADRDGAERTERELTAMLEMKHPEPGDWMPHVIKTEAAKGLGIDQLVDEFEA HHSYLKESGALQRLIQERNAKIFADTLREELFESVFSGIKESGKYQQILDGMRDRSTDPYSAVEEVMAARSFS
Specific function: May have GTPase activity. May also bind and hydrolyze ATP. May function as chaperone [H]
COG id: COG1703
COG function: function code E; Putative periplasmic protein kinase ArgK and related GTPases of G3E family
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgK family [H]
Homologues:
Organism=Homo sapiens, GI26892295, Length=235, Percent_Identity=33.6170212765957, Blast_Score=149, Evalue=4e-36, Organism=Escherichia coli, GI1789285, Length=319, Percent_Identity=31.3479623824451, Blast_Score=166, Evalue=2e-42, Organism=Caenorhabditis elegans, GI71994275, Length=259, Percent_Identity=30.8880308880309, Blast_Score=140, Evalue=6e-34, Organism=Caenorhabditis elegans, GI71994271, Length=259, Percent_Identity=30.8880308880309, Blast_Score=140, Evalue=7e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005129 - InterPro: IPR003593 [H]
Pfam domain/function: PF03308 ArgK [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 34134; Mature: 34003
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAERVLDGEIRAAARLMRDIDDRFKSAVDELKILYPHTGKAYIIGITGPPGAGKSTLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCHHHHH DQVVAAYRKKDLLVGVVAIDPTSPFSGGAILGDRIRMNRHADDPGVFIRSLATRGALGGL HHHHHHHHHCCEEEEEEEECCCCCCCCCCEEHHHHHHCCCCCCHHHHHHHHHHHHHHCCC SRSTMDVLNVMDAMGLDVIVVETVGVGQDEVDIVSTAHTTVVVMVPGLGDDIQAIKAGIL CHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHEEECCEEEEEEECCCCCHHHHHHHHHH EIGDVFVVNKADRDGAERTERELTAMLEMKHPEPGDWMPHVIKTEAAKGLGIDQLVDEFE HHCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH AHHSYLKESGALQRLIQERNAKIFADTLREELFESVFSGIKESGKYQQILDGMRDRSTDP HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH YSAVEEVMAARSFS HHHHHHHHHHHCCC >Mature Secondary Structure SLAERVLDGEIRAAARLMRDIDDRFKSAVDELKILYPHTGKAYIIGITGPPGAGKSTLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCHHHHH DQVVAAYRKKDLLVGVVAIDPTSPFSGGAILGDRIRMNRHADDPGVFIRSLATRGALGGL HHHHHHHHHCCEEEEEEEECCCCCCCCCCEEHHHHHHCCCCCCHHHHHHHHHHHHHHCCC SRSTMDVLNVMDAMGLDVIVVETVGVGQDEVDIVSTAHTTVVVMVPGLGDDIQAIKAGIL CHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHEEECCEEEEEEECCCCCHHHHHHHHHH EIGDVFVVNKADRDGAERTERELTAMLEMKHPEPGDWMPHVIKTEAAKGLGIDQLVDEFE HHCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH AHHSYLKESGALQRLIQERNAKIFADTLREELFESVFSGIKESGKYQQILDGMRDRSTDP HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH YSAVEEVMAARSFS HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Arg [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]