| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is bhbA [H]
Identifier: 197119066
GI number: 197119066
Start: 3113550
End: 3113954
Strand: Reverse
Name: bhbA [H]
Synonym: Gbem_2691
Alternate gene names: 197119066
Gene position: 3113954-3113550 (Counterclockwise)
Preceding gene: 197119067
Following gene: 197119065
Centisome position: 67.47
GC content: 62.22
Gene sequence:
>405_bases ATGGCTGAAAGAAGAATACGTGTACTGGTAGGTAAGCCGGGTCTGGACGGCCATGACAGGGGAGCCAAGATCATCGCCCG CGCTTTACGCGATGCCGGTTTCGAGGTCATCTACACCGGGCTGCACCAGACTCCCGAACAGATAGTTTCCGCCGCTATCC AGGAAGACGTCGACTGCGTGGCGCTCTCCATCCTCTCCGGCGCCCACAACACGCTGCTGCCGGCGGTCAGGGAGATCATG AAGGAAAAAGGGGCGAGCGACATCGTGCTCATGGCGGGCGGCGTCATCCCGGAGGACGACATCCCGGGCCTCAAGGCTGC CGGCATCGCCGAGGTCTTTACCCCGGGTACCTCGACCGAGACCATCGTCGCCTGGATGCGCGACAACGTAACTCCGCACG CCTAA
Upstream 100 bases:
>100_bases ACAAGGCCGGAGTGCCGGCGCGGATCGGCATCGAGAAATAGTGACGCTTTAAAAGCTTGGTAGCTTTATATTTCAATACT GATAAATTCGGAGGTATGCC
Downstream 100 bases:
>100_bases GACCTGTTCCGCATTTTGTTCTGCGTCACATGCGCCGCATTCTTGCCCACAGGCAGTTCGCGGCGCACCCGCGTAGAAGC CTGGAGAGACCCTGCGGCAA
Product: methylmalonyl-CoA mutase adenosylcobamide-binding subunit
Products: NA
Alternate protein names: MCM-alpha [H]
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MAERRIRVLVGKPGLDGHDRGAKIIARALRDAGFEVIYTGLHQTPEQIVSAAIQEDVDCVALSILSGAHNTLLPAVREIM KEKGASDIVLMAGGVIPEDDIPGLKAAGIAEVFTPGTSTETIVAWMRDNVTPHA
Sequences:
>Translated_134_residues MAERRIRVLVGKPGLDGHDRGAKIIARALRDAGFEVIYTGLHQTPEQIVSAAIQEDVDCVALSILSGAHNTLLPAVREIM KEKGASDIVLMAGGVIPEDDIPGLKAAGIAEVFTPGTSTETIVAWMRDNVTPHA >Mature_133_residues AERRIRVLVGKPGLDGHDRGAKIIARALRDAGFEVIYTGLHQTPEQIVSAAIQEDVDCVALSILSGAHNTLLPAVREIMK EKGASDIVLMAGGVIPEDDIPGLKAAGIAEVFTPGTSTETIVAWMRDNVTPHA
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates [H]
COG id: COG2185
COG function: function code I; Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=114, Percent_Identity=45.6140350877193, Blast_Score=101, Evalue=2e-22, Organism=Escherichia coli, GI1789284, Length=114, Percent_Identity=46.4912280701754, Blast_Score=107, Evalue=2e-25, Organism=Caenorhabditis elegans, GI25144500, Length=114, Percent_Identity=45.6140350877193, Blast_Score=95, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006159 - InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR006098 [H]
Pfam domain/function: PF02310 B12-binding; PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 14206; Mature: 14074
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERRIRVLVGKPGLDGHDRGAKIIARALRDAGFEVIYTGLHQTPEQIVSAAIQEDVDCV CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHCHHHH ALSILSGAHNTLLPAVREIMKEKGASDIVLMAGGVIPEDDIPGLKAAGIAEVFTPGTSTE HHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCHH TIVAWMRDNVTPHA HHHHHHHCCCCCCC >Mature Secondary Structure AERRIRVLVGKPGLDGHDRGAKIIARALRDAGFEVIYTGLHQTPEQIVSAAIQEDVDCV CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHCHHHH ALSILSGAHNTLLPAVREIMKEKGASDIVLMAGGVIPEDDIPGLKAAGIAEVFTPGTSTE HHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCHH TIVAWMRDNVTPHA HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2569861; 2569860; 8805541; 9655823 [H]