| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cheY [H]
Identifier: 197119042
GI number: 197119042
Start: 3083925
End: 3084626
Strand: Reverse
Name: cheY [H]
Synonym: Gbem_2665
Alternate gene names: 197119042
Gene position: 3084626-3083925 (Counterclockwise)
Preceding gene: 197119044
Following gene: 197119040
Centisome position: 66.84
GC content: 51.42
Gene sequence:
>702_bases GTGACCATTGAAGAGGCGTTTGGAATAGTTATTAGAAGACTGAGAAGAGAGCGTAACCTGTCTCAGGAAAAGCTTTCCAC AGCCAGCTGCCTGGACCGCAAATTCATCTCGAACCTTGAGGGCGGCAAACAACAGCCTAGCCTTGTATCTGTTTTCGCTC TCGCGGGTGCGCTGAATTCCACTGCGTCGAGTCTTCTTTACGAAGCGGAGTTTATCCTCAGGATAAACACGCCTGAAAAG CTGAGGAACGACGGCGGTTACGGCAAGATCGACTGGATCAGCAGCATGGAGATTATGATGAACAACGGGCATACTAGCTA CCAGGGTAGTGAAACTATCCTCGTTGTAGATGACGAAAAGCAGCTCAGGGACATGCTTTCCGACTTCCTCGCCAGCTACG GCTATACGGTCATCCTCGCGGAAGACGGGCAGGATGCCTTGGAGAAGTACAAGCAGAACCACAACGACATTCATCTTGTG GTGATGGATGTGGTCATGCCGCGCAAGGACGGACTCACCTGTTTCAGACAGATAAAAGAGTTGCACCCTGAAGCGAAGGT CCTCTTTATGAGCGGGTACCGCCCGGACCATCTGCAGGCCAAGGAAAATTTCAAGATGATCCAGAAACCCTTTTCTCCGG TTGAGATGATAATGGCGATCAGGCAGGTACTTGGAGACGGGACTCCCTCGTCTGACTCCTGA
Upstream 100 bases:
>100_bases TTTACATTGACGTGTTTTCATGGTAATGAGGTTAATTGTCTACAGTAATTTTAAATAAGTTCTGATATAAAGTATGTCCA CATTACCGGAGGCTCGATTA
Downstream 100 bases:
>100_bases CAAGGGAAGCACAAGTTGGGATTGCGATAGGTGATGCAGGGAAAGGGGCGCTCCGGAAAGAGCCGCCCCTTTTTTCGTGC CGTTAGCCTTGCTCGAACCA
Product: XRE family transcriptional response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTIEEAFGIVIRRLRRERNLSQEKLSTASCLDRKFISNLEGGKQQPSLVSVFALAGALNSTASSLLYEAEFILRINTPEK LRNDGGYGKIDWISSMEIMMNNGHTSYQGSETILVVDDEKQLRDMLSDFLASYGYTVILAEDGQDALEKYKQNHNDIHLV VMDVVMPRKDGLTCFRQIKELHPEAKVLFMSGYRPDHLQAKENFKMIQKPFSPVEMIMAIRQVLGDGTPSSDS
Sequences:
>Translated_233_residues MTIEEAFGIVIRRLRRERNLSQEKLSTASCLDRKFISNLEGGKQQPSLVSVFALAGALNSTASSLLYEAEFILRINTPEK LRNDGGYGKIDWISSMEIMMNNGHTSYQGSETILVVDDEKQLRDMLSDFLASYGYTVILAEDGQDALEKYKQNHNDIHLV VMDVVMPRKDGLTCFRQIKELHPEAKVLFMSGYRPDHLQAKENFKMIQKPFSPVEMIMAIRQVLGDGTPSSDS >Mature_232_residues TIEEAFGIVIRRLRRERNLSQEKLSTASCLDRKFISNLEGGKQQPSLVSVFALAGALNSTASSLLYEAEFILRINTPEKL RNDGGYGKIDWISSMEIMMNNGHTSYQGSETILVVDDEKQLRDMLSDFLASYGYTVILAEDGQDALEKYKQNHNDIHLVV MDVVMPRKDGLTCFRQIKELHPEAKVLFMSGYRPDHLQAKENFKMIQKPFSPVEMIMAIRQVLGDGTPSSDS
Specific function: Has a central controlling role in chemotaxis. Although it is homologous to the CheY protein of other bacteria, it is thought to function in a different manner [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 26327; Mature: 26195
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEEAFGIVIRRLRRERNLSQEKLSTASCLDRKFISNLEGGKQQPSLVSVFALAGALNS CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH TASSLLYEAEFILRINTPEKLRNDGGYGKIDWISSMEIMMNNGHTSYQGSETILVVDDEK HHHHHHHHEEEEEEECCHHHHHCCCCCCEEHHHHHHHHEECCCCCCCCCCCEEEEECCHH QLRDMLSDFLASYGYTVILAEDGQDALEKYKQNHNDIHLVVMDVVMPRKDGLTCFRQIKE HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEEEEHHHCCCCCHHHHHHHHH LHPEAKVLFMSGYRPDHLQAKENFKMIQKPFSPVEMIMAIRQVLGDGTPSSDS HCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TIEEAFGIVIRRLRRERNLSQEKLSTASCLDRKFISNLEGGKQQPSLVSVFALAGALNS CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH TASSLLYEAEFILRINTPEKLRNDGGYGKIDWISSMEIMMNNGHTSYQGSETILVVDDEK HHHHHHHHEEEEEEECCHHHHHCCCCCCEEHHHHHHHHEECCCCCCCCCCCEEEEECCHH QLRDMLSDFLASYGYTVILAEDGQDALEKYKQNHNDIHLVVMDVVMPRKDGLTCFRQIKE HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEEEEHHHCCCCCHHHHHHHHH LHPEAKVLFMSGYRPDHLQAKENFKMIQKPFSPVEMIMAIRQVLGDGTPSSDS HCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1905718; 9384377; 1447979; 1597417; 8755892 [H]