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The map label for this gene is ycbK [H]

Identifier: 197119040

GI number: 197119040

Start: 3082724

End: 3083296

Strand: Reverse

Name: ycbK [H]

Synonym: Gbem_2663

Alternate gene names: 197119040

Gene position: 3083296-3082724 (Counterclockwise)

Preceding gene: 197119042

Following gene: 197119033

Centisome position: 66.81

GC content: 57.77

Gene sequence:

>573_bases
TTGAAAGATACAATGCTGTGCCGCAGGATGTTTCTGAAGTCGTCGGCTTTTTTCGCCGCTACTCTCTTGGGTGCTAAATC
CACCTTTGCCAAAATTGTCGACGGGAACGAAGCGGGCGCTCTTGCTGAAGGGAAGCTTTCCCTGTACAACCTCAACCTCA
ACGAGCGTCTCACCGTCACCTACAGAAACGCCATGGGGGAATACTGCCAGGAGGCGCTGCAGGCGCTCAACTGGCTCTTT
CGCTGCCATTACACGAACGAAATGACCAAGATGGACCTAAGGGTGATCGAGTACCTGAACCGGCTCGACAACACGCTCGG
CGGGAACAACGAGATCCATATCATCTCCGGTTACCGCTCCCCCGCCTACAATGCGATGCTGCGCAGCAAATCCAAAGGCG
TGGCGAAGGACAGCCTGCATATGAAAGGGAGGGCGATCGACCTTGCCATACCGAGCTTCGGGCTGGACCAGATCCGCCGC
TCCGCCCTGACCCTCGCCGCCGGCGGGGTCGGCTACTACCCCCAACCGGGATTTGTCCACATCGACTCCGGCAACTTCAG
AACCTGGGGCTGA

Upstream 100 bases:

>100_bases
CAAAGCGTGAATTTTCTCGGGCGGGTTGACATCGTGGGCTGCATTATGGTAGCAAGGTAGGGCGTCTTGGAGGTAAGTAT
CCGTTTTTGAGGAGATTTGT

Downstream 100 bases:

>100_bases
ATCGTCGGCACCTTCATCAGCAATATCAGTACAGAAAAAGGGGCTTGTCCGGATGGACAGGCCCCTTTTGGTTGAGCGCT
TTATACGGCTACTGTGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKDTMLCRRMFLKSSAFFAATLLGAKSTFAKIVDGNEAGALAEGKLSLYNLNLNERLTVTYRNAMGEYCQEALQALNWLF
RCHYTNEMTKMDLRVIEYLNRLDNTLGGNNEIHIISGYRSPAYNAMLRSKSKGVAKDSLHMKGRAIDLAIPSFGLDQIRR
SALTLAAGGVGYYPQPGFVHIDSGNFRTWG

Sequences:

>Translated_190_residues
MKDTMLCRRMFLKSSAFFAATLLGAKSTFAKIVDGNEAGALAEGKLSLYNLNLNERLTVTYRNAMGEYCQEALQALNWLF
RCHYTNEMTKMDLRVIEYLNRLDNTLGGNNEIHIISGYRSPAYNAMLRSKSKGVAKDSLHMKGRAIDLAIPSFGLDQIRR
SALTLAAGGVGYYPQPGFVHIDSGNFRTWG
>Mature_190_residues
MKDTMLCRRMFLKSSAFFAATLLGAKSTFAKIVDGNEAGALAEGKLSLYNLNLNERLTVTYRNAMGEYCQEALQALNWLF
RCHYTNEMTKMDLRVIEYLNRLDNTLGGNNEIHIISGYRSPAYNAMLRSKSKGVAKDSLHMKGRAIDLAIPSFGLDQIRR
SALTLAAGGVGYYPQPGFVHIDSGNFRTWG

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=144, Percent_Identity=43.75, Blast_Score=121, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 21187; Mature: 21187

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDTMLCRRMFLKSSAFFAATLLGAKSTFAKIVDGNEAGALAEGKLSLYNLNLNERLTVT
CCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHEECCCCCCCEECCCEEEEEECCCCEEEEE
YRNAMGEYCQEALQALNWLFRCHYTNEMTKMDLRVIEYLNRLDNTLGGNNEIHIISGYRS
EHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
PAYNAMLRSKSKGVAKDSLHMKGRAIDLAIPSFGLDQIRRSALTLAAGGVGYYPQPGFVH
CHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEECCCCCCCCCCEEE
IDSGNFRTWG
EECCCEECCC
>Mature Secondary Structure
MKDTMLCRRMFLKSSAFFAATLLGAKSTFAKIVDGNEAGALAEGKLSLYNLNLNERLTVT
CCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHEECCCCCCCEECCCEEEEEECCCCEEEEE
YRNAMGEYCQEALQALNWLFRCHYTNEMTKMDLRVIEYLNRLDNTLGGNNEIHIISGYRS
EHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
PAYNAMLRSKSKGVAKDSLHMKGRAIDLAIPSFGLDQIRRSALTLAAGGVGYYPQPGFVH
CHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEECCCCCCCCCCEEE
IDSGNFRTWG
EECCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]