Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118998

Identifier: 197118998

GI number: 197118998

Start: 3038424

End: 3038612

Strand: Reverse

Name: 197118998

Synonym: Gbem_2621

Alternate gene names: NA

Gene position: 3038612-3038424 (Counterclockwise)

Preceding gene: 197119001

Following gene: 197118997

Centisome position: 65.84

GC content: 51.85

Gene sequence:

>189_bases
ATGAAATACACAGAAGCGGGATGCTATCTCGAAGTCGACGTCTTGACGGGAAACATAGACCGGGTGGCGGTCGACCCTAA
GGTAATGGAACAAAACATCTGCAGGCAGGGAATCAGCATCAATGAACCGTGCGGAGGGTTTTGCCAGCATTCGGTCAAGA
CCTGCCTCCGCGTGGAAGAAAGTGAATGA

Upstream 100 bases:

>100_bases
CGATTGTCGGGCGCCGGCCGCGAGCGTTCATCAACAGACGCAACCGCAAAGATGACTTTATTGGCTGATCACCAAATCAA
ACAGGGAGGAGGAAAGGAAA

Downstream 100 bases:

>100_bases
AAGCGATAGCCCAAGGAGGAACGTTACGAGCGCATTGGTAGATAAGACAGACATCAAGACATGGAATGGGCACATCTAAA
GAGAGGTGAAAATGAGATAC

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MKYTEAGCYLEVDVLTGNIDRVAVDPKVMEQNICRQGISINEPCGGFCQHSVKTCLRVEESE

Sequences:

>Translated_62_residues
MKYTEAGCYLEVDVLTGNIDRVAVDPKVMEQNICRQGISINEPCGGFCQHSVKTCLRVEESE
>Mature_62_residues
MKYTEAGCYLEVDVLTGNIDRVAVDPKVMEQNICRQGISINEPCGGFCQHSVKTCLRVEESE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6908; Mature: 6908

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
11.3 %Cys+Met (Translated Protein)
8.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
11.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYTEAGCYLEVDVLTGNIDRVAVDPKVMEQNICRQGISINEPCGGFCQHSVKTCLRVEE
CCCCCCCCEEEEEEEECCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
SE
CC
>Mature Secondary Structure
MKYTEAGCYLEVDVLTGNIDRVAVDPKVMEQNICRQGISINEPCGGFCQHSVKTCLRVEE
CCCCCCCCEEEEEEEECCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
SE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA