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The map label for this gene is yafE [C]

Identifier: 197118994

GI number: 197118994

Start: 3034424

End: 3035110

Strand: Reverse

Name: yafE [C]

Synonym: Gbem_2617

Alternate gene names: 197118994

Gene position: 3035110-3034424 (Counterclockwise)

Preceding gene: 197118995

Following gene: 197118993

Centisome position: 65.76

GC content: 58.37

Gene sequence:

>687_bases
ATGATGAACGATACTGCATGTAACTGGCTGGAGATTCATGACGCAGTGGGGACGTGCCTGCGTCCGGGAGGCCCGGCGCT
GACGGAGAGGGCGTTGGAGGTCTGCGATCTTCCGGCTGGTTCTTTGGTCGCCGATATCGGCTGCGGCGCGGGCGGGACGT
TGCTGCACCTTGAACGAACCCGCTTTTTCCGGCTGGTAGGGGTCGACGCTTCAGCGCCGCTTCTCGCGGTGGCAGCCGCC
AGGCTGGAAACGGCTCGACTCGTCTACGGGCGGGCAGAAAATCTCCCCTTCGAGCAGGAAACCTTCGATGCCCTCTTTTG
CGAATGCGTCCTTTCAATTGTCGACGACAAGCCGGCGGCTCTCGACGAGTTTACTCGGGTGGTTAAGGACGGTGGTTTTC
TGGTCTTAAGTGACGTTTTCAGCAAAGCCTGTCACGGAAAGAAGGAAAAAGCGGACATGCTTTTCTCGCAGGAGGAACTC
CTTGACTCGCTATCGCAGCGGGGGTTCACCGTATTGCTTTGGGAAGTGCACGACCGGCTGCTCAAGGAGTTCGCCGTACG
CATGATATTTGCCGGCAGATCCCTGCCGCAGTTTTCGGGGTGCGGCCTCAGCTACTACATTTTGGTTGCCCGGAGAGAGG
GGGCGATTTTCGAAGCAACCGGAAACGTAAGGGAGGGGAAATCATGA

Upstream 100 bases:

>100_bases
TGCGGATTCATACTGATCGACGAGGAACTGGCAATAGGAAAGGTGGCCGAGGCAGAGCAGGCGCTGGAAGACAAGTAGTG
CTACCGCTGGGAAGGTGACA

Downstream 100 bases:

>100_bases
ACGACATATTCCTGCAGCTAATAAAGCTGAGGCCCAAAGGGTACTGTTGCGCACAACTCATCGTAATACTCGCCCTCAAG
GCCCAAGGGAAGACCAATGA

Product: type 11 SAM-dependent methyltransferase

Products: NA

Alternate protein names: SAM-Dependent Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; S-Adenosylmethionine-Dependent Methyltransferase; Methyltransferase Domain Protein; MitM-Related Protein

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MMNDTACNWLEIHDAVGTCLRPGGPALTERALEVCDLPAGSLVADIGCGAGGTLLHLERTRFFRLVGVDASAPLLAVAAA
RLETARLVYGRAENLPFEQETFDALFCECVLSIVDDKPAALDEFTRVVKDGGFLVLSDVFSKACHGKKEKADMLFSQEEL
LDSLSQRGFTVLLWEVHDRLLKEFAVRMIFAGRSLPQFSGCGLSYYILVARREGAIFEATGNVREGKS

Sequences:

>Translated_228_residues
MMNDTACNWLEIHDAVGTCLRPGGPALTERALEVCDLPAGSLVADIGCGAGGTLLHLERTRFFRLVGVDASAPLLAVAAA
RLETARLVYGRAENLPFEQETFDALFCECVLSIVDDKPAALDEFTRVVKDGGFLVLSDVFSKACHGKKEKADMLFSQEEL
LDSLSQRGFTVLLWEVHDRLLKEFAVRMIFAGRSLPQFSGCGLSYYILVARREGAIFEATGNVREGKS
>Mature_228_residues
MMNDTACNWLEIHDAVGTCLRPGGPALTERALEVCDLPAGSLVADIGCGAGGTLLHLERTRFFRLVGVDASAPLLAVAAA
RLETARLVYGRAENLPFEQETFDALFCECVLSIVDDKPAALDEFTRVVKDGGFLVLSDVFSKACHGKKEKADMLFSQEEL
LDSLSQRGFTVLLWEVHDRLLKEFAVRMIFAGRSLPQFSGCGLSYYILVARREGAIFEATGNVREGKS

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24893; Mature: 24893

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNDTACNWLEIHDAVGTCLRPGGPALTERALEVCDLPAGSLVADIGCGAGGTLLHLERT
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEHH
RFFRLVGVDASAPLLAVAAARLETARLVYGRAENLPFEQETFDALFCECVLSIVDDKPAA
HEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH
LDEFTRVVKDGGFLVLSDVFSKACHGKKEKADMLFSQEELLDSLSQRGFTVLLWEVHDRL
HHHHHHHHHCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHH
LKEFAVRMIFAGRSLPQFSGCGLSYYILVARREGAIFEATGNVREGKS
HHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCC
>Mature Secondary Structure
MMNDTACNWLEIHDAVGTCLRPGGPALTERALEVCDLPAGSLVADIGCGAGGTLLHLERT
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEHH
RFFRLVGVDASAPLLAVAAARLETARLVYGRAENLPFEQETFDALFCECVLSIVDDKPAA
HEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH
LDEFTRVVKDGGFLVLSDVFSKACHGKKEKADMLFSQEELLDSLSQRGFTVLLWEVHDRL
HHHHHHHHHCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHH
LKEFAVRMIFAGRSLPQFSGCGLSYYILVARREGAIFEATGNVREGKS
HHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA