| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118993
Identifier: 197118993
GI number: 197118993
Start: 3033987
End: 3034427
Strand: Reverse
Name: 197118993
Synonym: Gbem_2616
Alternate gene names: NA
Gene position: 3034427-3033987 (Counterclockwise)
Preceding gene: 197118994
Following gene: 197118992
Centisome position: 65.75
GC content: 57.37
Gene sequence:
>441_bases ATGAACGACATATTCCTGCAGCTAATAAAGCTGAGGCCCAAAGGGTACTGTTGCGCACAACTCATCGTAATACTCGCCCT CAAGGCCCAAGGGAAGACCAATGACGACCTGGTGAGATCCGTCGGGGGACTCTGTTTCGGCAACTGGAGCGGCGAGTTCT GCGGAGCCCTTTCCGGAGGAGCCTGCGTTATCTCCCTGTATTCTGGCAAAGGAGGCGAGGAAGAGGCCCTCGACGAGCGG CATATGACGATGATGGGCGAGCTGGCGGGGTGGTTCAGGGAGGTTGCCGCCCGTGAGTACGGCGGGACGCGATGCGACGA AATCCTTGAGAAGTTTCCCGGTCACGGCAAATGCGGCCAGATTGTGGCGGAAACCTATGACAAATGCATGGAAATACTGG CAAGCCACGGGTTCGAACCCGCAGCTGGCAGGAAAGGATAA
Upstream 100 bases:
>100_bases TGCCGCAGTTTTCGGGGTGCGGCCTCAGCTACTACATTTTGGTTGCCCGGAGAGAGGGGGCGATTTTCGAAGCAACCGGA AACGTAAGGGAGGGGAAATC
Downstream 100 bases:
>100_bases AGGTCATGAAAACTACCGGTCCCGATGCAACCGAAAGCGTCTGCCCCGTTTGCCTCAAAAGAATCCCGGCCGAACGATTA TTGGTGGCCGACGAGGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Redox-Active Protein
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MNDIFLQLIKLRPKGYCCAQLIVILALKAQGKTNDDLVRSVGGLCFGNWSGEFCGALSGGACVISLYSGKGGEEEALDER HMTMMGELAGWFREVAAREYGGTRCDEILEKFPGHGKCGQIVAETYDKCMEILASHGFEPAAGRKG
Sequences:
>Translated_146_residues MNDIFLQLIKLRPKGYCCAQLIVILALKAQGKTNDDLVRSVGGLCFGNWSGEFCGALSGGACVISLYSGKGGEEEALDER HMTMMGELAGWFREVAAREYGGTRCDEILEKFPGHGKCGQIVAETYDKCMEILASHGFEPAAGRKG >Mature_146_residues MNDIFLQLIKLRPKGYCCAQLIVILALKAQGKTNDDLVRSVGGLCFGNWSGEFCGALSGGACVISLYSGKGGEEEALDER HMTMMGELAGWFREVAAREYGGTRCDEILEKFPGHGKCGQIVAETYDKCMEILASHGFEPAAGRKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15771; Mature: 15771
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDIFLQLIKLRPKGYCCAQLIVILALKAQGKTNDDLVRSVGGLCFGNWSGEFCGALSGG CHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCCCHHHCCCCCC ACVISLYSGKGGEEEALDERHMTMMGELAGWFREVAAREYGGTRCDEILEKFPGHGKCGQ EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHH IVAETYDKCMEILASHGFEPAAGRKG HHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNDIFLQLIKLRPKGYCCAQLIVILALKAQGKTNDDLVRSVGGLCFGNWSGEFCGALSGG CHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCCCHHHCCCCCC ACVISLYSGKGGEEEALDERHMTMMGELAGWFREVAAREYGGTRCDEILEKFPGHGKCGQ EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHH IVAETYDKCMEILASHGFEPAAGRKG HHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA