| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118882
Identifier: 197118882
GI number: 197118882
Start: 2904095
End: 2906332
Strand: Reverse
Name: 197118882
Synonym: Gbem_2505
Alternate gene names: NA
Gene position: 2906332-2904095 (Counterclockwise)
Preceding gene: 197118883
Following gene: 197118881
Centisome position: 62.97
GC content: 65.28
Gene sequence:
>2238_bases ATGAAGCCTTATCACGAGATATTCCCCAAGGCGGACCCTCAGTTCATCACCTTGGAAATTCCGCGCAAGACCGGACGCAT CCCGAAGGGGAACTACCGCTTCCTCGAACAGTACTGCACCGACCCCGGCGACGATTGCCGCCAACTCCTTATCTCGGCCG TTAACGAAAAATCACGCCCCAAGGCGAACATCCGCTTCAGCCTCGATGCCGCCGGCGCCTTCACCGGCCCCTACCTGGAT CCCGCCAGCTACCAGTCTCCCTACGCCGCAGATCTCGCCCAGGCCTTCACCGACATGCTCAACGCCCGCCCCGAGTGGCT GCAGCGCATCCAGCGCCGCTACCAGAAGGTGCGCGAACTCGCAGACAAAAAGCCCTACGCAGGGAAGCCTTTCCCCAAGC CGGGAGACATCCCGTACCAGCTGATGCCCCCTCCGGAACTTGAGGCCGTGCTGGAGGAGTCGCTGAAACACGCCCGCCCC GGCGCGACGCCTTCGTCCCCTGCTGCCAAACCGCCTGAAAGCGGCCTCGAACCGGGAAGGGGAGGCGCCCCCGACACGAA ACCCGACGCCGGCTCAGCCACCGGGATGCAGCGCTTCGTCGACCTATACGCCAAGGCCCAAGCCGCGCCGGTGGGCGCTC TTTTGGCCGTCCAGGAAGAACTGCGGCGGCACCTTCTGGCTGATCCCTTCGCCGGGGAGGAGCTTGCCGCCCTCCTCCCG CCTTTGTGCAGACGCTCGCCCCAGGACGACGAGAAGATCGACGCCGCGCTCAGGCTGCTCCGCGACATGCTCGATTTTTA CCAGGTGGAGATCGAGGGGGGGAGGGGGGGCGCCAGGCGTCAGATGGAACGGTTCCAGGGTGCGCTGGCGCGGCGCGTGA TGATGGAGAACCAGGACGTCGACCTCTCGCTGGCGGTGGTCCGCATCCTGTCGCAGAGCAGGGTCGAGCCGATTGCCGAG CTGCGGGACGCGGAAAAGAGGATCCTAGGCACCGGTGCCGGCCGCACCGACCTACAGGGAGCTGAAGCGGAGGATCTTTT GACCGGTATCGCCCGCAGCTTGAAGGCGATGGGGGTGTCTGCACCGTTCGAGGGGGCGGACGAGATACTGAAGCTCTCCG CGGCTAGCGACCCCGAGCTCCGCGCGCCGGTGATCTCCGAGCTGATGACGGCGGACGACCCTTTCCTGCGGGAGATCGCG ACGCTGATGCTCTTCCACCCCGACCCGGCGCACGCCCTGGAGGTGTCCCGGCTCCTCGTATCCATCGAGGGGTGTCGGAT CAGCCCGGAGACCTTGAGGCGGCTGATCATAGCCCGCAACTGGTTCCCAATCGAGATACGGCGCAACGTGGACCAGGCCA TAACCAACGCCCGCAAGGCGCGGGTTGAGTGCGCGCCGCTACCCAAACCTCCGGCTCTTGTCGTGTACGCCTCCGGCATC GACGGCTCCGGCGCACAAAGGTTCCAGGTGCTGCTCAAGGAAGGCGCCGCTTTCTGTTCTTGCTCCATCGTTTTGCAGGA GGGGAATGGCGTCGCCGACAGTTCCGTCAACCGCTTCACATCGCGGGCGGAAAAAGACAGATTTATCGCCGGCCTCACCG GCGGCTTCTCCTACCTGGAACAATCGTCCCCGCAGTATCTCGACCTGCGCGTCTGCCAGGCGCTGGCCGACGGCGTCTCC AACGGCGTCGCGCCCAACCACTGGTTTGTGAGGATTGCCGAGCTGTTCGGGCGCGACCGGTGGAAAGGAACCCCACTCGA TGCAGGCAACGAATTGCTCCTCCTGCGCGACGAGATCGACTCCCTCAACCCGGCCCTGCTCGAGGAAAGCGAGTATCTCG CGGCGCTGGAAGAATCGGGAGAGTGGCCGGTCGCCTTCCCCGCCGTTTTAGGCAGTTGGGCCGAGACCGGAGATGCGGTT GGGCGTGAAGTCGAAGCGGCAAAGAAGGGGAGGGGGAGCGGGAGGGATGCCCAGGCTATTGAGCGCGTACTGTCGAACCT GATGGAGCCAAGGCGCGACGCATGGCTGGACCGGCTGGTTGTCGACACGCTTTGGCTGCGCCAGGCCCGGAACGCACCGC TCAACTGGCAGCGGATGTACCATGTCGCGCAGGCTGTTGCCGATCGCACCTTGGCGCTCAAGGAGATCCCGCTGATGTCG GCTGTGGCGCGCTGGACGGTGGAGCAGTACCGCGCGAAGGGCGTGGGGGGGAAGGAAAAGGGGAAAGGCCCGCGGTGA
Upstream 100 bases:
>100_bases ATTTTAATGTTTTTTGGGTTTTCTCTTCTTTTTGCCTTTCTCAGATTTTCTCCCAAACTCCTTGTTAATGGTTTTGGGTT TTTTGTTTGAAAGGTTTTCG
Downstream 100 bases:
>100_bases CCGCGATTGCACCCATCTATCTTCCCGTGCTCTTCGCAACAGGAGCAGCCGCGGGGCTCATCGATTCCATAGCCGGAGGA GGTGGGCTGATCACGGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 745; Mature: 745
Protein sequence:
>745_residues MKPYHEIFPKADPQFITLEIPRKTGRIPKGNYRFLEQYCTDPGDDCRQLLISAVNEKSRPKANIRFSLDAAGAFTGPYLD PASYQSPYAADLAQAFTDMLNARPEWLQRIQRRYQKVRELADKKPYAGKPFPKPGDIPYQLMPPPELEAVLEESLKHARP GATPSSPAAKPPESGLEPGRGGAPDTKPDAGSATGMQRFVDLYAKAQAAPVGALLAVQEELRRHLLADPFAGEELAALLP PLCRRSPQDDEKIDAALRLLRDMLDFYQVEIEGGRGGARRQMERFQGALARRVMMENQDVDLSLAVVRILSQSRVEPIAE LRDAEKRILGTGAGRTDLQGAEAEDLLTGIARSLKAMGVSAPFEGADEILKLSAASDPELRAPVISELMTADDPFLREIA TLMLFHPDPAHALEVSRLLVSIEGCRISPETLRRLIIARNWFPIEIRRNVDQAITNARKARVECAPLPKPPALVVYASGI DGSGAQRFQVLLKEGAAFCSCSIVLQEGNGVADSSVNRFTSRAEKDRFIAGLTGGFSYLEQSSPQYLDLRVCQALADGVS NGVAPNHWFVRIAELFGRDRWKGTPLDAGNELLLLRDEIDSLNPALLEESEYLAALEESGEWPVAFPAVLGSWAETGDAV GREVEAAKKGRGSGRDAQAIERVLSNLMEPRRDAWLDRLVVDTLWLRQARNAPLNWQRMYHVAQAVADRTLALKEIPLMS AVARWTVEQYRAKGVGGKEKGKGPR
Sequences:
>Translated_745_residues MKPYHEIFPKADPQFITLEIPRKTGRIPKGNYRFLEQYCTDPGDDCRQLLISAVNEKSRPKANIRFSLDAAGAFTGPYLD PASYQSPYAADLAQAFTDMLNARPEWLQRIQRRYQKVRELADKKPYAGKPFPKPGDIPYQLMPPPELEAVLEESLKHARP GATPSSPAAKPPESGLEPGRGGAPDTKPDAGSATGMQRFVDLYAKAQAAPVGALLAVQEELRRHLLADPFAGEELAALLP PLCRRSPQDDEKIDAALRLLRDMLDFYQVEIEGGRGGARRQMERFQGALARRVMMENQDVDLSLAVVRILSQSRVEPIAE LRDAEKRILGTGAGRTDLQGAEAEDLLTGIARSLKAMGVSAPFEGADEILKLSAASDPELRAPVISELMTADDPFLREIA TLMLFHPDPAHALEVSRLLVSIEGCRISPETLRRLIIARNWFPIEIRRNVDQAITNARKARVECAPLPKPPALVVYASGI DGSGAQRFQVLLKEGAAFCSCSIVLQEGNGVADSSVNRFTSRAEKDRFIAGLTGGFSYLEQSSPQYLDLRVCQALADGVS NGVAPNHWFVRIAELFGRDRWKGTPLDAGNELLLLRDEIDSLNPALLEESEYLAALEESGEWPVAFPAVLGSWAETGDAV GREVEAAKKGRGSGRDAQAIERVLSNLMEPRRDAWLDRLVVDTLWLRQARNAPLNWQRMYHVAQAVADRTLALKEIPLMS AVARWTVEQYRAKGVGGKEKGKGPR >Mature_745_residues MKPYHEIFPKADPQFITLEIPRKTGRIPKGNYRFLEQYCTDPGDDCRQLLISAVNEKSRPKANIRFSLDAAGAFTGPYLD PASYQSPYAADLAQAFTDMLNARPEWLQRIQRRYQKVRELADKKPYAGKPFPKPGDIPYQLMPPPELEAVLEESLKHARP GATPSSPAAKPPESGLEPGRGGAPDTKPDAGSATGMQRFVDLYAKAQAAPVGALLAVQEELRRHLLADPFAGEELAALLP PLCRRSPQDDEKIDAALRLLRDMLDFYQVEIEGGRGGARRQMERFQGALARRVMMENQDVDLSLAVVRILSQSRVEPIAE LRDAEKRILGTGAGRTDLQGAEAEDLLTGIARSLKAMGVSAPFEGADEILKLSAASDPELRAPVISELMTADDPFLREIA TLMLFHPDPAHALEVSRLLVSIEGCRISPETLRRLIIARNWFPIEIRRNVDQAITNARKARVECAPLPKPPALVVYASGI DGSGAQRFQVLLKEGAAFCSCSIVLQEGNGVADSSVNRFTSRAEKDRFIAGLTGGFSYLEQSSPQYLDLRVCQALADGVS NGVAPNHWFVRIAELFGRDRWKGTPLDAGNELLLLRDEIDSLNPALLEESEYLAALEESGEWPVAFPAVLGSWAETGDAV GREVEAAKKGRGSGRDAQAIERVLSNLMEPRRDAWLDRLVVDTLWLRQARNAPLNWQRMYHVAQAVADRTLALKEIPLMS AVARWTVEQYRAKGVGGKEKGKGPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82057; Mature: 82057
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPYHEIFPKADPQFITLEIPRKTGRIPKGNYRFLEQYCTDPGDDCRQLLISAVNEKSRP CCCCHHHCCCCCCCEEEEEECHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC KANIRFSLDAAGAFTGPYLDPASYQSPYAADLAQAFTDMLNARPEWLQRIQRRYQKVREL CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ADKKPYAGKPFPKPGDIPYQLMPPPELEAVLEESLKHARPGATPSSPAAKPPESGLEPGR HHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GGAPDTKPDAGSATGMQRFVDLYAKAQAAPVGALLAVQEELRRHLLADPFAGEELAALLP CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC PLCRRSPQDDEKIDAALRLLRDMLDFYQVEIEGGRGGARRQMERFQGALARRVMMENQDV HHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCC DLSLAVVRILSQSRVEPIAELRDAEKRILGTGAGRTDLQGAEAEDLLTGIARSLKAMGVS CHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC APFEGADEILKLSAASDPELRAPVISELMTADDPFLREIATLMLFHPDPAHALEVSRLLV CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH SIEGCRISPETLRRLIIARNWFPIEIRRNVDQAITNARKARVECAPLPKPPALVVYASGI HHCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEECCC DGSGAQRFQVLLKEGAAFCSCSIVLQEGNGVADSSVNRFTSRAEKDRFIAGLTGGFSYLE CCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEHHHHHHHHH QSSPQYLDLRVCQALADGVSNGVAPNHWFVRIAELFGRDRWKGTPLDAGNELLLLRDEID CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHC SLNPALLEESEYLAALEESGEWPVAFPAVLGSWAETGDAVGREVEAAKKGRGSGRDAQAI CCCHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH ERVLSNLMEPRRDAWLDRLVVDTLWLRQARNAPLNWQRMYHVAQAVADRTLALKEIPLMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVARWTVEQYRAKGVGGKEKGKGPR HHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKPYHEIFPKADPQFITLEIPRKTGRIPKGNYRFLEQYCTDPGDDCRQLLISAVNEKSRP CCCCHHHCCCCCCCEEEEEECHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC KANIRFSLDAAGAFTGPYLDPASYQSPYAADLAQAFTDMLNARPEWLQRIQRRYQKVREL CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ADKKPYAGKPFPKPGDIPYQLMPPPELEAVLEESLKHARPGATPSSPAAKPPESGLEPGR HHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GGAPDTKPDAGSATGMQRFVDLYAKAQAAPVGALLAVQEELRRHLLADPFAGEELAALLP CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC PLCRRSPQDDEKIDAALRLLRDMLDFYQVEIEGGRGGARRQMERFQGALARRVMMENQDV HHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCC DLSLAVVRILSQSRVEPIAELRDAEKRILGTGAGRTDLQGAEAEDLLTGIARSLKAMGVS CHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC APFEGADEILKLSAASDPELRAPVISELMTADDPFLREIATLMLFHPDPAHALEVSRLLV CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH SIEGCRISPETLRRLIIARNWFPIEIRRNVDQAITNARKARVECAPLPKPPALVVYASGI HHCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEECCC DGSGAQRFQVLLKEGAAFCSCSIVLQEGNGVADSSVNRFTSRAEKDRFIAGLTGGFSYLE CCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEHHHHHHHHH QSSPQYLDLRVCQALADGVSNGVAPNHWFVRIAELFGRDRWKGTPLDAGNELLLLRDEID CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHC SLNPALLEESEYLAALEESGEWPVAFPAVLGSWAETGDAVGREVEAAKKGRGSGRDAQAI CCCHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH ERVLSNLMEPRRDAWLDRLVVDTLWLRQARNAPLNWQRMYHVAQAVADRTLALKEIPLMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVARWTVEQYRAKGVGGKEKGKGPR HHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA