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The map label for this gene is yfcA [C]

Identifier: 197118881

GI number: 197118881

Start: 2903334

End: 2904098

Strand: Reverse

Name: yfcA [C]

Synonym: Gbem_2504

Alternate gene names: 197118881

Gene position: 2904098-2903334 (Counterclockwise)

Preceding gene: 197118882

Following gene: 197118879

Centisome position: 62.93

GC content: 64.31

Gene sequence:

>765_bases
GTGACCGCGATTGCACCCATCTATCTTCCCGTGCTCTTCGCAACAGGAGCAGCCGCGGGGCTCATCGATTCCATAGCCGG
AGGAGGTGGGCTGATCACGGTCCCGGTGCTGCTGGGACTGGGGCTTCCGCCGCAGGCAGCGCTGGGGACCAACAAGCTGC
AGGGTAGTTTTGGCTCCTTCAGCGCCATGGTCCACTTCGTCCAGGCTGGGACGGTAAACCTATCGGACGCCGCTGCCGGG
GCGGCCTGGACTGCCGCCGGCGCCATCCTCGGCTCCTATACGGTGCAGCAGTTGGATCCCGGCTTCCTGAAGCAGGGGAT
ACCCTTTCTGCTTATGGCCATCCTCTGTTACACCATCTTTACGCCCAGGTTAGGCGCCGAAGAGGTTCACCCCCGGCTTT
CCAGGGGACTCTTCTATGCGGTAGCCGGGCTGGCGCTCGGTTTCTACGACGGCTTTCTCGGCCCGGGCACCGGCTCCTTC
TGGGTGATGGCCCTGATGCTCGGGCTCGGCTTCGACATGCGCAAGGGGACCGGCTACACCAAGGTCTTCAACTTCGTCAG
CAACATCGTGTCGCTGGCGGTCTTTCTGGCGGGAGGAGAGGTGCTGCTCCTGCCGGGGGTGGTGATGGGGGTGGGGCAGG
CCGTTGGGGCGAGGGTAGGGGCGAGGCTCGTGATCAGGAAGGGGACCCGGTTCGTGCGGCCGGTCTTCATCTGCTCGGTG
CTGGCGGTAACGACGAAGCTCTTCTGGGACAACTACCTGCGCTGA

Upstream 100 bases:

>100_bases
CGCTCAAGGAGATCCCGCTGATGTCGGCTGTGGCGCGCTGGACGGTGGAGCAGTACCGCGCGAAGGGCGTGGGGGGGAAG
GAAAAGGGGAAAGGCCCGCG

Downstream 100 bases:

>100_bases
AACTTAAAGCAAAGGCACTCACCACAGAGGAACACAGAGGAACCACAGAGGAAAAACAAAATACAGGCAACTTCAAAGGC
ATTTAACGCCCAAACTGCTT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MTAIAPIYLPVLFATGAAAGLIDSIAGGGGLITVPVLLGLGLPPQAALGTNKLQGSFGSFSAMVHFVQAGTVNLSDAAAG
AAWTAAGAILGSYTVQQLDPGFLKQGIPFLLMAILCYTIFTPRLGAEEVHPRLSRGLFYAVAGLALGFYDGFLGPGTGSF
WVMALMLGLGFDMRKGTGYTKVFNFVSNIVSLAVFLAGGEVLLLPGVVMGVGQAVGARVGARLVIRKGTRFVRPVFICSV
LAVTTKLFWDNYLR

Sequences:

>Translated_254_residues
MTAIAPIYLPVLFATGAAAGLIDSIAGGGGLITVPVLLGLGLPPQAALGTNKLQGSFGSFSAMVHFVQAGTVNLSDAAAG
AAWTAAGAILGSYTVQQLDPGFLKQGIPFLLMAILCYTIFTPRLGAEEVHPRLSRGLFYAVAGLALGFYDGFLGPGTGSF
WVMALMLGLGFDMRKGTGYTKVFNFVSNIVSLAVFLAGGEVLLLPGVVMGVGQAVGARVGARLVIRKGTRFVRPVFICSV
LAVTTKLFWDNYLR
>Mature_253_residues
TAIAPIYLPVLFATGAAAGLIDSIAGGGGLITVPVLLGLGLPPQAALGTNKLQGSFGSFSAMVHFVQAGTVNLSDAAAGA
AWTAAGAILGSYTVQQLDPGFLKQGIPFLLMAILCYTIFTPRLGAEEVHPRLSRGLFYAVAGLALGFYDGFLGPGTGSFW
VMALMLGLGFDMRKGTGYTKVFNFVSNIVSLAVFLAGGEVLLLPGVVMGVGQAVGARVGARLVIRKGTRFVRPVFICSVL
AVTTKLFWDNYLR

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=249, Percent_Identity=41.7670682730924, Blast_Score=184, Evalue=5e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26395; Mature: 26263

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS00539 PYROKININ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCC
>Mature Secondary Structure 
TAIAPIYLPVLFATGAAAGLIDSIAGGGGLITVPVLLGLGLPPQAALGTNKLQGSFGSF
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHCCCCHHCCCHHHH
SAMVHFVQAGTVNLSDAAAGAAWTAAGAILGSYTVQQLDPGFLKQGIPFLLMAILCYTIF
HHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHH
TPRLGAEEVHPRLSRGLFYAVAGLALGFYDGFLGPGTGSFWVMALMLGLGFDMRKGTGYT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHH
KVFNFVSNIVSLAVFLAGGEVLLLPGVVMGVGQAVGARVGARLVIRKGTRFVRPVFICSV
HHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH
LAVTTKLFWDNYLR
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]