Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118880

Identifier: 197118880

GI number: 197118880

Start: 2902437

End: 2903105

Strand: Direct

Name: 197118880

Synonym: Gbem_2503

Alternate gene names: NA

Gene position: 2902437-2903105 (Clockwise)

Preceding gene: 197118870

Following gene: 197118887

Centisome position: 62.89

GC content: 60.84

Gene sequence:

>669_bases
ATGTCGGATACGCCGAAATCGAGCAGCGAAAAACATATCGAAACCATCATGGAGCATCTGCAGCCGGGAACGGAGCGCTA
CGAGGTGCTGGACCGGGCCAAGCGTTTCAAATCGTCCTGGGTCGAATTGGGCGAAAAGCTTTTGGACGTGAGCAAGAGGG
CACGCTTTAGGGAGTGGGGCTACGGTAGTTTCGAGGAGTACTGCGTGCAGGAGATCCGCATCAAGCGGGGGACCGCCGAG
AAGCTCACCATGGCCTACCGCTTCATGGAAAAGGAGGAGCCCCAGTTGATAGACCGGCGCGAGGAGCTGAAGCCGCTTCC
CGACTACCGCTCCATCGACCTCTTGCGCCAGGCCAAGGAAGAGAAGGGTTTTACCGAAGAGGAGTACGGCGACCTGAGAA
AGCGCGTGGTAGAAGAGGACCGCAGCCACCCGACCGTGCTGAAGAAGTTCAAGGAAGTGGCGGCCTTAAGGGAAGAGGTG
AACCCGCTGGCGCCGCTCAAGGCAGGCATCTCGGCGGCCAGGAGGCTCGACTCCGCCCTGCGCGCCATGGAACGCGCCCC
CGCCGTCTACCTGGAGCAGGTGAGCGAGATGATCGCGCACCTGGAACAGGAGCTCGAAGCATCGAGCGTAGGAAGCGAAG
ACGAGGCCGGCAGCATCCGCGCCATATAA

Upstream 100 bases:

>100_bases
TTGCAGCCAAGATAAAAAACTTCAAAAAGCGGACGGATTCTGATAATTTCCAGCTGCCCTTTTGAGCCGGCCAAGGCTCC
TCGGGCTACGGAGGGAAAAG

Downstream 100 bases:

>100_bases
TCACAAACAAAGGCTTTCACCACAGAGGACACAGAGGGACACAGAGGAAAACAAAAACCTTAAAAACGTGGAACAGGGAT
GAAGGGGATAAAGGGGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSDTPKSSSEKHIETIMEHLQPGTERYEVLDRAKRFKSSWVELGEKLLDVSKRARFREWGYGSFEEYCVQEIRIKRGTAE
KLTMAYRFMEKEEPQLIDRREELKPLPDYRSIDLLRQAKEEKGFTEEEYGDLRKRVVEEDRSHPTVLKKFKEVAALREEV
NPLAPLKAGISAARRLDSALRAMERAPAVYLEQVSEMIAHLEQELEASSVGSEDEAGSIRAI

Sequences:

>Translated_222_residues
MSDTPKSSSEKHIETIMEHLQPGTERYEVLDRAKRFKSSWVELGEKLLDVSKRARFREWGYGSFEEYCVQEIRIKRGTAE
KLTMAYRFMEKEEPQLIDRREELKPLPDYRSIDLLRQAKEEKGFTEEEYGDLRKRVVEEDRSHPTVLKKFKEVAALREEV
NPLAPLKAGISAARRLDSALRAMERAPAVYLEQVSEMIAHLEQELEASSVGSEDEAGSIRAI
>Mature_221_residues
SDTPKSSSEKHIETIMEHLQPGTERYEVLDRAKRFKSSWVELGEKLLDVSKRARFREWGYGSFEEYCVQEIRIKRGTAEK
LTMAYRFMEKEEPQLIDRREELKPLPDYRSIDLLRQAKEEKGFTEEEYGDLRKRVVEEDRSHPTVLKKFKEVAALREEVN
PLAPLKAGISAARRLDSALRAMERAPAVYLEQVSEMIAHLEQELEASSVGSEDEAGSIRAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25703; Mature: 25572

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS51143 MT_A70

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTPKSSSEKHIETIMEHLQPGTERYEVLDRAKRFKSSWVELGEKLLDVSKRARFREWG
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YGSFEEYCVQEIRIKRGTAEKLTMAYRFMEKEEPQLIDRREELKPLPDYRSIDLLRQAKE
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
EKGFTEEEYGDLRKRVVEEDRSHPTVLKKFKEVAALREEVNPLAPLKAGISAARRLDSAL
HCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RAMERAPAVYLEQVSEMIAHLEQELEASSVGSEDEAGSIRAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SDTPKSSSEKHIETIMEHLQPGTERYEVLDRAKRFKSSWVELGEKLLDVSKRARFREWG
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YGSFEEYCVQEIRIKRGTAEKLTMAYRFMEKEEPQLIDRREELKPLPDYRSIDLLRQAKE
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
EKGFTEEEYGDLRKRVVEEDRSHPTVLKKFKEVAALREEVNPLAPLKAGISAARRLDSAL
HCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RAMERAPAVYLEQVSEMIAHLEQELEASSVGSEDEAGSIRAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA