| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is entA [C]
Identifier: 197118870
GI number: 197118870
Start: 2887899
End: 2888501
Strand: Direct
Name: entA [C]
Synonym: Gbem_2493
Alternate gene names: 197118870
Gene position: 2887899-2888501 (Clockwise)
Preceding gene: 197118869
Following gene: 197118880
Centisome position: 62.57
GC content: 63.68
Gene sequence:
>603_bases ATGCGAATCATCGTCGTCGGAGCAACCGGAACTATAGGAAAAGCCGTGGCCAAGCTGTTGTCCACGGAGCATGAAGTGGC GAAGGTCGCCTTCAGTAGCGGCGACTTGCGGGTGGACATGTCGCGCAAGGATTCCATAGAGTCGATGTTCAAGGAGGTCG GAGACTTCGATGCCCTGGTCTGCGCGGCGGGAGTCGCCAGGTTCGGCTCCCTGGCTGAATTGACCGACGAGGACTTCCAG ACCGGGCTCTCCGGGAAGCTGATGGGCCAGGTCAACCTGGTCCGGGTGGGGATGCACTACATCCGGGATAACGGCTCCTT CACGCTGACCAGCGGGGTCTTGAGCCACCAGCCCATGCCCGGGAGTTCCTCCATCAGCATGATCAACGCGGGGCTCGAAG GGTTTGTCCGCGCCGCCGCGCTGGAACTGCCGCGCGGGATCAGGATCAACGTGGTGAGCCCCCCCTGGGTGAAGGAGACC CTTGAGGCGCTGGATATGGACAGCTCGGGGGGAATGCCTGCGCAGGACGTGGCGCAGGCCTACTGGGCCAGCATACACGG CGCCCGCAGCGGCCTAGTCATCAACGCCCGGGACTTCGCCTGA
Upstream 100 bases:
>100_bases CAGATATACTTCACGCTGTACCTCGGCCTGTAGGGGGGCGACAGCGCCCCCTGCAGCGGCTCGGGGGCCATAAAAAAGCG CCAATACGGGAGGTCTCTTT
Downstream 100 bases:
>100_bases GACAGAAGCAGGAAAGGGCAGGAATTAAAAAGGGGAGCGCCGCTAACAGGCGCTCCCCTTTTCTTGTCTCCGGAAATCCG GAATCACCTCTCCAGCACTT
Product: short chain dehydrogenase
Products: 2,3-Dihydroxybenzoate; H+; Nicotinamide adenine dinucleotide - reduced [C]
Alternate protein names: Short-Chain Dehydrogenase/Reductase SDR; Dehydrogenase; 3-Oxoacyl-[Acyl-Carrier-Protein] Reductase; Short-Chain Dehydrogenase; Oxidoreductase; Oxidoreductase Short Chain Dehydrogenase/Reductase Family; NAD-Dependent Epimerase/Dehydratase; Acyl-Carrier-Protein; Aklaviketone Reductase; 2-Hydroxycyclohexanecarboxyl-CoA Dehydrogenase; Short-Chain Dehydrogenase Protein; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; DTDP-4-Dehydrorhamnose Reductase; Short Chain Dehydrogenase Family Protein; Dehydrogenases With Different Specificities; Short-Chain Dehydrogenase/Reductase
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MRIIVVGATGTIGKAVAKLLSTEHEVAKVAFSSGDLRVDMSRKDSIESMFKEVGDFDALVCAAGVARFGSLAELTDEDFQ TGLSGKLMGQVNLVRVGMHYIRDNGSFTLTSGVLSHQPMPGSSSISMINAGLEGFVRAAALELPRGIRINVVSPPWVKET LEALDMDSSGGMPAQDVAQAYWASIHGARSGLVINARDFA
Sequences:
>Translated_200_residues MRIIVVGATGTIGKAVAKLLSTEHEVAKVAFSSGDLRVDMSRKDSIESMFKEVGDFDALVCAAGVARFGSLAELTDEDFQ TGLSGKLMGQVNLVRVGMHYIRDNGSFTLTSGVLSHQPMPGSSSISMINAGLEGFVRAAALELPRGIRINVVSPPWVKET LEALDMDSSGGMPAQDVAQAYWASIHGARSGLVINARDFA >Mature_200_residues MRIIVVGATGTIGKAVAKLLSTEHEVAKVAFSSGDLRVDMSRKDSIESMFKEVGDFDALVCAAGVARFGSLAELTDEDFQ TGLSGKLMGQVNLVRVGMHYIRDNGSFTLTSGVLSHQPMPGSSSISMINAGLEGFVRAAALELPRGIRINVVSPPWVKET LEALDMDSSGGMPAQDVAQAYWASIHGARSGLVINARDFA
Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.3.1.28 [C]
Molecular weight: Translated: 21172; Mature: 21172
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIVVGATGTIGKAVAKLLSTEHEVAKVAFSSGDLRVDMSRKDSIESMFKEVGDFDALV CEEEEEECCCHHHHHHHHHHHCHHHHHHHEECCCCEEEECCHHHHHHHHHHHHCCHHHHH CAAGVARFGSLAELTDEDFQTGLSGKLMGQVNLVRVGMHYIRDNGSFTLTSGVLSHQPMP HHHHHHHHCCHHHHCHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCCC GSSSISMINAGLEGFVRAAALELPRGIRINVVSPPWVKETLEALDMDSSGGMPAQDVAQA CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHH YWASIHGARSGLVINARDFA HHHHHHCCCCCEEEECCCCC >Mature Secondary Structure MRIIVVGATGTIGKAVAKLLSTEHEVAKVAFSSGDLRVDMSRKDSIESMFKEVGDFDALV CEEEEEECCCHHHHHHHHHHHCHHHHHHHEECCCCEEEECCHHHHHHHHHHHHCCHHHHH CAAGVARFGSLAELTDEDFQTGLSGKLMGQVNLVRVGMHYIRDNGSFTLTSGVLSHQPMP HHHHHHHHCCHHHHCHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCCC GSSSISMINAGLEGFVRAAALELPRGIRINVVSPPWVKETLEALDMDSSGGMPAQDVAQA CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHH YWASIHGARSGLVINARDFA HHHHHHCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NAD+ [C]
Metal ions: NA
Kcat value (1/min): 5550 [C]
Specific activity: 66
Km value (mM): 0.26 {methyl-2,3-dehydro-3-hydroxybenzoate}} 0.2 {3-oxocyclohexane-1-carboxylic} 0.3 {2,3-dihydro-2,3-dihydroxybenzoate}} [C]
Substrates: 2,3-Dihydro-2,3-dihydroxybenzoate; Nicotinamide adenine dinucleotide [C]
Specific reaction: 2,3-Dihydro-2,3-dihydroxybenzoate + Nicotinamide adenine dinucleotide <==> 2,3-Dihydroxybenzoate + H+ + Nicotinamide adenine dinucleotide - reduced [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA