Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is yqhE [C]

Identifier: 197118878

GI number: 197118878

Start: 2900995

End: 2901945

Strand: Reverse

Name: yqhE [C]

Synonym: Gbem_2501

Alternate gene names: 197118878

Gene position: 2901945-2900995 (Counterclockwise)

Preceding gene: 197118879

Following gene: 197118877

Centisome position: 62.88

GC content: 64.67

Gene sequence:

>951_bases
ATGAACAAAGTTCGCCTTGGCAGCACCGGTTTGGAGATCAACCCCCTCGTTTTCGGCACTCTCCCCTTGGGTCCTTTGCA
GGCAGGCCTCTCCCCCGACGAGGGGGGGAGGCTGATCCGCTACGCGCTGGAGCGCGGCGTCAACCTCTTGGACACCGCCG
AACTGTACCAGACCTACCCGCACATCCTCTCCGCTTTATCCGGGTTTACCGGCGAGGTTTACATCGCCTCCAAGACCCAC
GCCAATACGGCTGAGCAGGCACGCGCCCACGTCGAGCGCGCGCTGAAGGAACTGGAGTTGGAGCGGTTGGACATCGTGCA
CCTGCACGGCGCCAGGGTCGCCGACCCGTTCGTAGAGCGCCCCGAGGTGATCGAGACGCTGCTCAGGATGAAGGAGGAGG
GGAAGATCGCCCACGTAGGCCTTTCCTCCCATTTCGTCGGCGCCATCAGGAAGTCGGTGCAGCATCCCGAGATCGAGGTG
GTGCATCCCCTCATCAACCGGGCCGGCATGGGGATCATCGACGGCACGCAGAATGAGATGGCCGAAGCCATAGCCGCCTG
CGCCGATGCCGGCAAGGGAGTCTATGCCATGAAGGCGTTGGCCGGCGGCAACCTCATCTCCTCGGCGCGGGAGAGCCTGC
GCTACGTGCTCGGGGTGCGCGGGGTCCACGGCGTGGCCCTGGGGATGCTTTCCGAACCGGAGATCGACGGGAACCTGGCC
CTGTTCCACGATGACCGCGCCGATGAAGCGCTCTGGGAAAAGCTGGAGGGGAGAAGGCGCAAGCTCGCCATCATGGAGGC
GTTTTGCAAGGGGTGCGGCGCCTGCGTCCCGGCCTGCACCAACGACGCGCTGAGGCTCGTGGACGGAAAAGCCGTCGTAG
ACGAGGCCGAATGCATTCTCTGCGGCTACTGCGGCGCTGCCTGCCCGGAGTTCATGATCCGGGTGGTGTAA

Upstream 100 bases:

>100_bases
CCCCCGCCGCATTACTAAACTAGATTGGGGCTAACCGAACCGGAAGACAGGACGGTTTCGCCTGCAAGCTAGCGCATCAC
GTGAAGGGACTACAGATTCT

Downstream 100 bases:

>100_bases
AAAAAAGGCGGAAACCTAAAGGCGGAACACAGAGGTCGCGGAGGTTCACGGAGGTCACAGAGGTTTTTTTTGTGAAACCC
CAAAAAAGGCACTCACCACA

Product: aldo/keto reductase family oxidoreductase

Products: 2-keto-L-gulonate; NADP [C]

Alternate protein names: Aldo/Keto Reductase Family Oxidoreductase; Oxidoreductase Aldo/Keto Reductase Family; Oxidoreductase; Aldo/Keto Reductase Family Protein; Oxidoreductase Aldo/Keto Reductase Family Protein; Oxidoreductase Of Aldo/Keto Reductase Family

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MNKVRLGSTGLEINPLVFGTLPLGPLQAGLSPDEGGRLIRYALERGVNLLDTAELYQTYPHILSALSGFTGEVYIASKTH
ANTAEQARAHVERALKELELERLDIVHLHGARVADPFVERPEVIETLLRMKEEGKIAHVGLSSHFVGAIRKSVQHPEIEV
VHPLINRAGMGIIDGTQNEMAEAIAACADAGKGVYAMKALAGGNLISSARESLRYVLGVRGVHGVALGMLSEPEIDGNLA
LFHDDRADEALWEKLEGRRRKLAIMEAFCKGCGACVPACTNDALRLVDGKAVVDEAECILCGYCGAACPEFMIRVV

Sequences:

>Translated_316_residues
MNKVRLGSTGLEINPLVFGTLPLGPLQAGLSPDEGGRLIRYALERGVNLLDTAELYQTYPHILSALSGFTGEVYIASKTH
ANTAEQARAHVERALKELELERLDIVHLHGARVADPFVERPEVIETLLRMKEEGKIAHVGLSSHFVGAIRKSVQHPEIEV
VHPLINRAGMGIIDGTQNEMAEAIAACADAGKGVYAMKALAGGNLISSARESLRYVLGVRGVHGVALGMLSEPEIDGNLA
LFHDDRADEALWEKLEGRRRKLAIMEAFCKGCGACVPACTNDALRLVDGKAVVDEAECILCGYCGAACPEFMIRVV
>Mature_316_residues
MNKVRLGSTGLEINPLVFGTLPLGPLQAGLSPDEGGRLIRYALERGVNLLDTAELYQTYPHILSALSGFTGEVYIASKTH
ANTAEQARAHVERALKELELERLDIVHLHGARVADPFVERPEVIETLLRMKEEGKIAHVGLSSHFVGAIRKSVQHPEIEV
VHPLINRAGMGIIDGTQNEMAEAIAACADAGKGVYAMKALAGGNLISSARESLRYVLGVRGVHGVALGMLSEPEIDGNLA
LFHDDRADEALWEKLEGRRRKLAIMEAFCKGCGACVPACTNDALRLVDGKAVVDEAECILCGYCGAACPEFMIRVV

Specific function: Reduction [C]

COG id: COG1453

COG function: function code R; Predicted oxidoreductases of the aldo/keto reductase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34040; Mature: 34040

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVRLGSTGLEINPLVFGTLPLGPLQAGLSPDEGGRLIRYALERGVNLLDTAELYQTYP
CCCEECCCCCCEECCEEEECCCCCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
HILSALSGFTGEVYIASKTHANTAEQARAHVERALKELELERLDIVHLHGARVADPFVER
HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHCC
PEVIETLLRMKEEGKIAHVGLSSHFVGAIRKSVQHPEIEVVHPLINRAGMGIIDGTQNEM
HHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCHHHH
AEAIAACADAGKGVYAMKALAGGNLISSARESLRYVLGVRGVHGVALGMLSEPEIDGNLA
HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEE
LFHDDRADEALWEKLEGRRRKLAIMEAFCKGCGACVPACTNDALRLVDGKAVVDEAECIL
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHCCCCEEE
CGYCGAACPEFMIRVV
EECHHHHHHHHHHHCC
>Mature Secondary Structure
MNKVRLGSTGLEINPLVFGTLPLGPLQAGLSPDEGGRLIRYALERGVNLLDTAELYQTYP
CCCEECCCCCCEECCEEEECCCCCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
HILSALSGFTGEVYIASKTHANTAEQARAHVERALKELELERLDIVHLHGARVADPFVER
HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHCC
PEVIETLLRMKEEGKIAHVGLSSHFVGAIRKSVQHPEIEVVHPLINRAGMGIIDGTQNEM
HHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCHHHH
AEAIAACADAGKGVYAMKALAGGNLISSARESLRYVLGVRGVHGVALGMLSEPEIDGNLA
HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEE
LFHDDRADEALWEKLEGRRRKLAIMEAFCKGCGACVPACTNDALRLVDGKAVVDEAECIL
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHCCCCEEE
CGYCGAACPEFMIRVV
EECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2,5-diketo-D-gluconate; NADPH [C]

Specific reaction: 2,5-diketo-D-gluconate + NADPH = 2-keto-L-gulonate + NADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA