Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is slyX [C]

Identifier: 197118879

GI number: 197118879

Start: 2902028

End: 2902231

Strand: Reverse

Name: slyX [C]

Synonym: Gbem_2502

Alternate gene names: 197118879

Gene position: 2902231-2902028 (Counterclockwise)

Preceding gene: 197118881

Following gene: 197118878

Centisome position: 62.88

GC content: 54.9

Gene sequence:

>204_bases
ATGGAACAGCGTCTGACTGAGATGGAGATGCTGATCATGCATCAGGGTCGCATCATAGATCAATTGAACGAAGTAGTTAC
CGGGCAGCAGACCATGATCGACCACCTCACCCGGGAACTGAAACTGATCAAGGAACACCTGCGCGGATTGGCCGCCTCGG
ACACGAGGCTTCCCTCCGAAGAAGAGCCCCCGCCGCATTACTAA

Upstream 100 bases:

>100_bases
AATCGCGTTAAACTTTGCCATCCAAAAATAAGCCAGCCCCCGTTACTGGAAGTCCTTGCAGCTTCCGTGCGGGCGGCCGA
GGTCATAAAAGGAGACAGAC

Downstream 100 bases:

>100_bases
ACTAGATTGGGGCTAACCGAACCGGAAGACAGGACGGTTTCGCCTGCAAGCTAGCGCATCACGTGAAGGGACTACAGATT
CTATGAACAAAGTTCGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MEQRLTEMEMLIMHQGRIIDQLNEVVTGQQTMIDHLTRELKLIKEHLRGLAASDTRLPSEEEPPPHY

Sequences:

>Translated_67_residues
MEQRLTEMEMLIMHQGRIIDQLNEVVTGQQTMIDHLTRELKLIKEHLRGLAASDTRLPSEEEPPPHY
>Mature_67_residues
MEQRLTEMEMLIMHQGRIIDQLNEVVTGQQTMIDHLTRELKLIKEHLRGLAASDTRLPSEEEPPPHY

Specific function: Unknown

COG id: COG2900

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7849; Mature: 7849

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQRLTEMEMLIMHQGRIIDQLNEVVTGQQTMIDHLTRELKLIKEHLRGLAASDTRLPSE
CCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EEPPPHY
CCCCCCC
>Mature Secondary Structure
MEQRLTEMEMLIMHQGRIIDQLNEVVTGQQTMIDHLTRELKLIKEHLRGLAASDTRLPSE
CCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EEPPPHY
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA