Click here to switch to the map view.

The map label for this gene is 197118864

Identifier: 197118864

GI number: 197118864

Start: 2880677

End: 2880925

Strand: Direct

Name: 197118864

Synonym: Gbem_2487

Alternate gene names: NA

Gene position: 2880677-2880925 (Clockwise)

Preceding gene: 197118859

Following gene: 197118865

Centisome position: 62.42

GC content: 53.82

Gene sequence:

>249_bases
ATGCAGAATGCTTTCTTCGACGCGACAGCCCCCAAGAAGTCGACAAATCTGAGTATAAACAGCGATCTGCTGCGCCTTGC
GAAAGAGCGGCACATAAACCTCTCCCAGGCGTTGGAATCGCGGCTTGCGGAAATGCTGCGGAAGGAGACCAGCCGCAGCT
GGCAGGAAGAAAACCGTGAAGCTATCGAAGAGTACAACAGCCGCGTGCAAAGCGATGGGACCTTCAGTGACGATTTGAGG
CATTTCTGA

Upstream 100 bases:

>100_bases
CGAAGCTGTGGCAGAACGGGAACAGGCATCTAGCGCGGGTTGCCATTCCTCCTAAAGCCAGCTATCATATGCGCATAACC
CGTGCGCATAGGAGACCTAC

Downstream 100 bases:

>100_bases
TGGCTCAATTCGAAGTTTACCGGAACGGGAATCCCAGGACCAGGGATGAGATCCCCTATCTGCTGGACGTGCAGGCGGAG
CTCTTGGCTTCCCTCGCCAC

Product: antitoxin CcdA

Products: NA

Alternate protein names: CcdB Antidote CcdA; CcdA Protein; Antitoxin CcdA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MQNAFFDATAPKKSTNLSINSDLLRLAKERHINLSQALESRLAEMLRKETSRSWQEENREAIEEYNSRVQSDGTFSDDLR
HF

Sequences:

>Translated_82_residues
MQNAFFDATAPKKSTNLSINSDLLRLAKERHINLSQALESRLAEMLRKETSRSWQEENREAIEEYNSRVQSDGTFSDDLR
HF
>Mature_82_residues
MQNAFFDATAPKKSTNLSINSDLLRLAKERHINLSQALESRLAEMLRKETSRSWQEENREAIEEYNSRVQSDGTFSDDLR
HF

Specific function: Unknown

COG id: COG5302

COG function: function code R; Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9574; Mature: 9574

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNAFFDATAPKKSTNLSINSDLLRLAKERHINLSQALESRLAEMLRKETSRSWQEENRE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIEEYNSRVQSDGTFSDDLRHF
HHHHHHHHHHCCCCCCHHHCCC
>Mature Secondary Structure
MQNAFFDATAPKKSTNLSINSDLLRLAKERHINLSQALESRLAEMLRKETSRSWQEENRE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIEEYNSRVQSDGTFSDDLRHF
HHHHHHHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA