Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118858

Identifier: 197118858

GI number: 197118858

Start: 2874595

End: 2875026

Strand: Direct

Name: 197118858

Synonym: Gbem_2481

Alternate gene names: NA

Gene position: 2874595-2875026 (Clockwise)

Preceding gene: 197118857

Following gene: 197118859

Centisome position: 62.29

GC content: 63.66

Gene sequence:

>432_bases
GTGAAGATCCGGACGGGCAACGCCTACGACGCCGAGACCCACGGCACCGGCTGGTTTCTCGGCTTCAGCGACTGGACGCT
GAACGACCCGTCGGGCCTGCTGCACGTCCCCAAAGGGGAAGCGCTCACCGGGCTCTGCGCCAAGTGGTACGATCACCCTT
CCGGCGACGAAAGCGGCAACTCTAAGCCCGTCAGCGAGGGGAGGACTGTTTCCATTTTGGTCAGCGCCGACTCCGCTTTC
CGGATCGAATTCTCGCCATCCCCCGACTTCCCCTCGGAAGAGGTGCAGAGCGTGCTACTCAAGCGGCACGGCGACTTCGC
CGCCTGGGGGGAGGGTCTGTATCACCGGTGGCACTGCCTATCCCGAGCGACCGTCCTCACCATCAGATGGACCCCGACAA
CTGCTGCGGCAAAGGACGAGACATCTTCATGA

Upstream 100 bases:

>100_bases
CCCCTTGGCTCAGCTTCCCCGTGCCGCCTGCCGGGACAGCGCTCCAAGCGCAGTTTTCGCCTGGCGCTGAACCTCGCTCT
GATTCCGCGGCGGGTGAGCC

Downstream 100 bases:

>100_bases
CTAAAACCACCTCACCTCTCACGGCCAAAGTCCACTACGGCTGGATCATCGTCGCCACCAGCGCCCTGGGCCTTTTTTCC
TGCTTCGGCCTGGCCCGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKIRTGNAYDAETHGTGWFLGFSDWTLNDPSGLLHVPKGEALTGLCAKWYDHPSGDESGNSKPVSEGRTVSILVSADSAF
RIEFSPSPDFPSEEVQSVLLKRHGDFAAWGEGLYHRWHCLSRATVLTIRWTPTTAAAKDETSS

Sequences:

>Translated_143_residues
MKIRTGNAYDAETHGTGWFLGFSDWTLNDPSGLLHVPKGEALTGLCAKWYDHPSGDESGNSKPVSEGRTVSILVSADSAF
RIEFSPSPDFPSEEVQSVLLKRHGDFAAWGEGLYHRWHCLSRATVLTIRWTPTTAAAKDETSS
>Mature_143_residues
MKIRTGNAYDAETHGTGWFLGFSDWTLNDPSGLLHVPKGEALTGLCAKWYDHPSGDESGNSKPVSEGRTVSILVSADSAF
RIEFSPSPDFPSEEVQSVLLKRHGDFAAWGEGLYHRWHCLSRATVLTIRWTPTTAAAKDETSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15681; Mature: 15681

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRTGNAYDAETHGTGWFLGFSDWTLNDPSGLLHVPKGEALTGLCAKWYDHPSGDESGN
CEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCC
SKPVSEGRTVSILVSADSAFRIEFSPSPDFPSEEVQSVLLKRHGDFAAWGEGLYHRWHCL
CCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
SRATVLTIRWTPTTAAAKDETSS
CCEEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKIRTGNAYDAETHGTGWFLGFSDWTLNDPSGLLHVPKGEALTGLCAKWYDHPSGDESGN
CEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCC
SKPVSEGRTVSILVSADSAFRIEFSPSPDFPSEEVQSVLLKRHGDFAAWGEGLYHRWHCL
CCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
SRATVLTIRWTPTTAAAKDETSS
CCEEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA