| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118846
Identifier: 197118846
GI number: 197118846
Start: 2856327
End: 2859689
Strand: Reverse
Name: 197118846
Synonym: Gbem_2469
Alternate gene names: NA
Gene position: 2859689-2856327 (Counterclockwise)
Preceding gene: 197118847
Following gene: 197118842
Centisome position: 61.96
GC content: 64.64
Gene sequence:
>3363_bases ATGGAACTATTGGCTAACCCCCTGCTGCGGCATCTTTCCCAGATGCCGGCCTCAGGCATATACGCACTGGCGGACAAGGT GCACCTCTTCAACGGCTTCGAGCTGTGCAAGAGGAGGCCGGTTACCCGGGTCACCTGGAGCGGGGACGGCTCCGTCCTCA CCGTGGAGGTCTCGGATGCCGGCACCTATCAGGTGTCGTTGACCTTGGCCCAGGGGGAGTTTTCCAGTGTCTGCAACTGC GGCACTTGGAGCCCCGGAGGGCGCTGTCCCCACCTGGTCGCCTCCCTCGCCACCGTGAAAAAGGCGCTGGCGCCGGCCTC CTTCCCCATGCTGCAGCTCCCGCAGGACTACCTGGAACAGATCCGCAACCAACTGCTGGGCGTCCCTGCGCTGCGGATGG ACGAACTGCACCACCGCCAGTCGGGGGAGGCGCGCTACGCGCTGGTCCTCGACCTGGAACTCGGCTCTCCCCGCCTGCGC CTGACCCATGACCTGATCCCCGCAGCCCTTTTCGATGCAGCGCTTCCTCCCTCGATCCGCGAGTTCCTGAGGTTGATGCA ATCCTCCGCCTTGCGCGGCCGTTGCATCGAAGAGTTCATCACCCGCTTCCGCGGCAGATTCCCTATTCTTTACGCCTCCG CTGAAGGGGTCGTCCCCCTCCAGTTCGACCATTCAAGCGATCGTGCCGTTTTGCTGCAACTGGATCTGGAAGGAGACGAG ATCGCCGCCAGCTTCTCGCTTGAGGACGGCTCCGCGCCGGATCCGGATTCCTTCGTGCACCAGGGATACTATTTCGACCT CGGCCGCAGGCTGGTGCAGCGGGTGGACGACGCCGGCCTCGTTTTCTACCACTCCCTCTTCGCGCGGGTCGAAGAGGCCA TGGGGGTGGCGCCGGCGCGCCACGGGAGCGGATTCCGCTTCCCCGCCCCGCTCTTCAACTCGCTGCAGTTGGATCTGGGC GAGTCGCAGCAGGGGAAGGGGGGCGCCGCCCTGTCGATCTCCGGGGTCCCGGAGCAGCCTCGGCTGGTCCAGCCGCGCTA CCGCCTTGATATCGTTGAGCTTGCCGACCCGGTTCCGGTCGTGGCCCAGGGGGTGACCGACGGCGTCATCTTCGGTTTGT CCCCGGTTAGCTTCAAATTCTTCAGCACCCGGGGGCGCGCTACGTTGCCGCAGACCCTCAAGGCGAAAAAACGGGTCATC TCCGTGATCAGGGCCTGTTTCGCCGCTCTTTCGGCAGGGAGCACGGCCGAACGGGAGAGGGTGGTCAGGCAGGCGCTGGA CACGCCGGAATTTTTCAAGCGCGGGGTCCGTTCAGAGGCGCGCGCCGCTGTTACCTCCTTCTGCGAGGCGGCCCTCGCCC ATGGCGTGGTGCTGCAATTGTCGCAGCAAGGGGAGTGGCTGGCCGTAGAGGTGGACGGGAGACAGCAGGGGCGGCTTTTG CAAATCGCCTGCGACTTTTTCGGCTGCGAGATTTTCTGGCAGGCGGAGCGGCCGGGGGAGATGACGCTTGCGAGAAAGGA GCTGATGAAGAATCTCTCCCGCTTCTGCGACGCCCTCTCCGCGGAGGGGTTCTCGCTCGCCATCGGGGGGGAGGAACTGC AGGCCGTTTCCTGGTCTTTCACGCTGGACGCCACCCGCTCCAGCATCGACTGGTTCGAACTGCGGCCGGAGATCAGCTGC GACGGCGAGACGGTGGACGACGCCGAGCTTGTCCGCGCCCTTCAGGGGGGCGGGATCTTCCGGCGCGGCAACGAGATGGT GATCCTGGACGAGTTGAGCAGCAACACCCTTTCGCTCTTCGGCGCGGCGACGAAGAGGGAGGTGGTCCGAGTGCCGCGCC TGCAGATCCTCGACTGGATCACACTCAGGCGCAGCGGGGTCCGGATCCTTCTTTCCCCCGAGGACGAGCGGATCTTCGAG AGCCTGACCCGTTTCGAGAGCATCCCCAAGCGCCAGGCTCCGGCGAGGCTTTTGGCGACGCTCAGGAACTATCAGCTGGA AGGGTACAGCTGGCTCGCCTTTCTCTACGAGCACCGTTTCGGGGCCTGCCTCGCCGACGACATGGGGCTGGGAAAGACCA TCCAGGCCATCGCCCTTCTGGCGGGGATAGCCGAGGGGGATATCCCCTGCGAGCTTCCGACCGGGACGCCGCACCTGGTG GTGGTACCGCCGACCCTCATCTTCAACTGGGAGAACGAGCTGCAGCGCTTTTACCCCGCGCTCAAGGTCGGGGTCTACCG CGGGCAGGGGCGCAGCGCCGAGTTCGCCGGGCTGGACCTGGTGCTTACCAGCTACGGCGTGGTGCAGCGCGATATCGAAC AGCTCAGGGAGATCCCGTTCAACGTCATCGTCTTCGACGAGGCTCAGTCGGTGAAGAACATACACGCGGAGACCACCGGC GCCGTGCGCAGGCTCTCCGGAAGGTTCAAGCTCACCCTCACCGGCACTCCGGTCGAGAACCACCTAGGTGAATACTTCTC GGTCATGGACCTGGCGCTTCCCGGGCTTTTAGGCCCCTACGAGCAGTTCCGCAAGGAGATGGGGCGGGAAGGGGGGGACT TCATGGAGAAGCTGATCCGGCGCACCCACCCCTTCATCCTGAGACGGTCGAAGGACATGATCGCCGACGAGCTCCCCCCC AAGGTGGAGACCGACATCTACCTGGAGATGAGCACGAGGCAAAAGGCGCTCTACGCCCGCACCGTCGCCCAGGTGCGGGA AACGGTGGCGCTGGCCTACAGTTCAAAAAGCCCCGGGCAGGCGCGCATCATCGCCCTCACCGCCATCTTGAAGCTGCGCC AGATCTGCCTGAGCTCGAAGCTCATCCTGCCCCAGGCCCCGGACCGTTCCCCAAAGATCGACTTCCTGGTGGACCAGCTG ATGGAGCTCTTCGCCGAGGGGCACAGCGTCCTGGTCTTCTCGCAGTTCACCTCGTTTTTGGACATCGTGGAGCAGGGGCT TTCCCAGCACGGCATCGGCTTTTCCAGGTTGGACGGTTCGACCCCGGTCTCGCGCAGGAAGGAGATGGTGCAGAGGTTCC AGGAGTCGGCAGAGCCCGGAGTATTCCTGCTGAGCCTGAAGGCGGGCGGTCGCGGCCTCAACCTGACCCGCGCCTCCTAC GTCTTCCACCTGGATCCCTGGTGGAACCCCGCGGTGGAAAGCCAGGCTTCCGACCGCGCGCACCGGATCGGGCAGCAGCG GCAGGTGACCATCACCAGGCTTTTGATGCGGCACAGCATCGAGGAGAAGATGATGGAGCTCAAGAAAAGGAAGCTGAAGC TGTACCGGGCCCTTCTGGAGGAGGCCGAGCACGAGGGGGGCAACGCCATCAGCCGCGAGGATTTCGAATACCTGCTGGGG TAG
Upstream 100 bases:
>100_bases CCCCGTTTGCTTTCATCTCTCATGGTGTTGTTGTATTGGAGCGCGCTTTCTGCTAACTTAAACGGTTCGTTAAGCAGCCC CCGGCGGGAGAGCGGATCTG
Downstream 100 bases:
>100_bases GGGAATTCAGGGGAGGCGCTAGGCCTGGGGTTGGGTGAAGTATCTGCAGAAGGAGAGGGTGTTCCTGCCGTTATTGGAGC TGTAGCTCACCTCGTCCATG
Product: helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1120; Mature: 1120
Protein sequence:
>1120_residues MELLANPLLRHLSQMPASGIYALADKVHLFNGFELCKRRPVTRVTWSGDGSVLTVEVSDAGTYQVSLTLAQGEFSSVCNC GTWSPGGRCPHLVASLATVKKALAPASFPMLQLPQDYLEQIRNQLLGVPALRMDELHHRQSGEARYALVLDLELGSPRLR LTHDLIPAALFDAALPPSIREFLRLMQSSALRGRCIEEFITRFRGRFPILYASAEGVVPLQFDHSSDRAVLLQLDLEGDE IAASFSLEDGSAPDPDSFVHQGYYFDLGRRLVQRVDDAGLVFYHSLFARVEEAMGVAPARHGSGFRFPAPLFNSLQLDLG ESQQGKGGAALSISGVPEQPRLVQPRYRLDIVELADPVPVVAQGVTDGVIFGLSPVSFKFFSTRGRATLPQTLKAKKRVI SVIRACFAALSAGSTAERERVVRQALDTPEFFKRGVRSEARAAVTSFCEAALAHGVVLQLSQQGEWLAVEVDGRQQGRLL QIACDFFGCEIFWQAERPGEMTLARKELMKNLSRFCDALSAEGFSLAIGGEELQAVSWSFTLDATRSSIDWFELRPEISC DGETVDDAELVRALQGGGIFRRGNEMVILDELSSNTLSLFGAATKREVVRVPRLQILDWITLRRSGVRILLSPEDERIFE SLTRFESIPKRQAPARLLATLRNYQLEGYSWLAFLYEHRFGACLADDMGLGKTIQAIALLAGIAEGDIPCELPTGTPHLV VVPPTLIFNWENELQRFYPALKVGVYRGQGRSAEFAGLDLVLTSYGVVQRDIEQLREIPFNVIVFDEAQSVKNIHAETTG AVRRLSGRFKLTLTGTPVENHLGEYFSVMDLALPGLLGPYEQFRKEMGREGGDFMEKLIRRTHPFILRRSKDMIADELPP KVETDIYLEMSTRQKALYARTVAQVRETVALAYSSKSPGQARIIALTAILKLRQICLSSKLILPQAPDRSPKIDFLVDQL MELFAEGHSVLVFSQFTSFLDIVEQGLSQHGIGFSRLDGSTPVSRRKEMVQRFQESAEPGVFLLSLKAGGRGLNLTRASY VFHLDPWWNPAVESQASDRAHRIGQQRQVTITRLLMRHSIEEKMMELKKRKLKLYRALLEEAEHEGGNAISREDFEYLLG
Sequences:
>Translated_1120_residues MELLANPLLRHLSQMPASGIYALADKVHLFNGFELCKRRPVTRVTWSGDGSVLTVEVSDAGTYQVSLTLAQGEFSSVCNC GTWSPGGRCPHLVASLATVKKALAPASFPMLQLPQDYLEQIRNQLLGVPALRMDELHHRQSGEARYALVLDLELGSPRLR LTHDLIPAALFDAALPPSIREFLRLMQSSALRGRCIEEFITRFRGRFPILYASAEGVVPLQFDHSSDRAVLLQLDLEGDE IAASFSLEDGSAPDPDSFVHQGYYFDLGRRLVQRVDDAGLVFYHSLFARVEEAMGVAPARHGSGFRFPAPLFNSLQLDLG ESQQGKGGAALSISGVPEQPRLVQPRYRLDIVELADPVPVVAQGVTDGVIFGLSPVSFKFFSTRGRATLPQTLKAKKRVI SVIRACFAALSAGSTAERERVVRQALDTPEFFKRGVRSEARAAVTSFCEAALAHGVVLQLSQQGEWLAVEVDGRQQGRLL QIACDFFGCEIFWQAERPGEMTLARKELMKNLSRFCDALSAEGFSLAIGGEELQAVSWSFTLDATRSSIDWFELRPEISC DGETVDDAELVRALQGGGIFRRGNEMVILDELSSNTLSLFGAATKREVVRVPRLQILDWITLRRSGVRILLSPEDERIFE SLTRFESIPKRQAPARLLATLRNYQLEGYSWLAFLYEHRFGACLADDMGLGKTIQAIALLAGIAEGDIPCELPTGTPHLV VVPPTLIFNWENELQRFYPALKVGVYRGQGRSAEFAGLDLVLTSYGVVQRDIEQLREIPFNVIVFDEAQSVKNIHAETTG AVRRLSGRFKLTLTGTPVENHLGEYFSVMDLALPGLLGPYEQFRKEMGREGGDFMEKLIRRTHPFILRRSKDMIADELPP KVETDIYLEMSTRQKALYARTVAQVRETVALAYSSKSPGQARIIALTAILKLRQICLSSKLILPQAPDRSPKIDFLVDQL MELFAEGHSVLVFSQFTSFLDIVEQGLSQHGIGFSRLDGSTPVSRRKEMVQRFQESAEPGVFLLSLKAGGRGLNLTRASY VFHLDPWWNPAVESQASDRAHRIGQQRQVTITRLLMRHSIEEKMMELKKRKLKLYRALLEEAEHEGGNAISREDFEYLLG >Mature_1120_residues MELLANPLLRHLSQMPASGIYALADKVHLFNGFELCKRRPVTRVTWSGDGSVLTVEVSDAGTYQVSLTLAQGEFSSVCNC GTWSPGGRCPHLVASLATVKKALAPASFPMLQLPQDYLEQIRNQLLGVPALRMDELHHRQSGEARYALVLDLELGSPRLR LTHDLIPAALFDAALPPSIREFLRLMQSSALRGRCIEEFITRFRGRFPILYASAEGVVPLQFDHSSDRAVLLQLDLEGDE IAASFSLEDGSAPDPDSFVHQGYYFDLGRRLVQRVDDAGLVFYHSLFARVEEAMGVAPARHGSGFRFPAPLFNSLQLDLG ESQQGKGGAALSISGVPEQPRLVQPRYRLDIVELADPVPVVAQGVTDGVIFGLSPVSFKFFSTRGRATLPQTLKAKKRVI SVIRACFAALSAGSTAERERVVRQALDTPEFFKRGVRSEARAAVTSFCEAALAHGVVLQLSQQGEWLAVEVDGRQQGRLL QIACDFFGCEIFWQAERPGEMTLARKELMKNLSRFCDALSAEGFSLAIGGEELQAVSWSFTLDATRSSIDWFELRPEISC DGETVDDAELVRALQGGGIFRRGNEMVILDELSSNTLSLFGAATKREVVRVPRLQILDWITLRRSGVRILLSPEDERIFE SLTRFESIPKRQAPARLLATLRNYQLEGYSWLAFLYEHRFGACLADDMGLGKTIQAIALLAGIAEGDIPCELPTGTPHLV VVPPTLIFNWENELQRFYPALKVGVYRGQGRSAEFAGLDLVLTSYGVVQRDIEQLREIPFNVIVFDEAQSVKNIHAETTG AVRRLSGRFKLTLTGTPVENHLGEYFSVMDLALPGLLGPYEQFRKEMGREGGDFMEKLIRRTHPFILRRSKDMIADELPP KVETDIYLEMSTRQKALYARTVAQVRETVALAYSSKSPGQARIIALTAILKLRQICLSSKLILPQAPDRSPKIDFLVDQL MELFAEGHSVLVFSQFTSFLDIVEQGLSQHGIGFSRLDGSTPVSRRKEMVQRFQESAEPGVFLLSLKAGGRGLNLTRASY VFHLDPWWNPAVESQASDRAHRIGQQRQVTITRLLMRHSIEEKMMELKKRKLKLYRALLEEAEHEGGNAISREDFEYLLG
Specific function: Unknown
COG id: COG0553
COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SWIM-type zinc finger [H]
Homologues:
Organism=Homo sapiens, GI27477070, Length=550, Percent_Identity=32.9090909090909, Blast_Score=268, Evalue=2e-71, Organism=Homo sapiens, GI164419749, Length=482, Percent_Identity=33.195020746888, Blast_Score=253, Evalue=1e-66, Organism=Homo sapiens, GI21071044, Length=494, Percent_Identity=32.3886639676113, Blast_Score=244, Evalue=3e-64, Organism=Homo sapiens, GI21071058, Length=485, Percent_Identity=32.1649484536082, Blast_Score=240, Evalue=5e-63, Organism=Homo sapiens, GI148612870, Length=473, Percent_Identity=33.8266384778013, Blast_Score=228, Evalue=4e-59, Organism=Homo sapiens, GI21914927, Length=556, Percent_Identity=28.9568345323741, Blast_Score=223, Evalue=6e-58, Organism=Homo sapiens, GI29244924, Length=508, Percent_Identity=31.6929133858268, Blast_Score=219, Evalue=1e-56, Organism=Homo sapiens, GI192807318, Length=495, Percent_Identity=32.1212121212121, Blast_Score=219, Evalue=2e-56, Organism=Homo sapiens, GI192807320, Length=495, Percent_Identity=32.1212121212121, Blast_Score=219, Evalue=2e-56, Organism=Homo sapiens, GI192807314, Length=495, Percent_Identity=32.1212121212121, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI48255898, Length=499, Percent_Identity=32.2645290581162, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI114326455, Length=509, Percent_Identity=31.8271119842829, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI48255900, Length=499, Percent_Identity=32.2645290581162, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI190358536, Length=527, Percent_Identity=30.550284629981, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI190358532, Length=527, Percent_Identity=30.550284629981, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI192807316, Length=495, Percent_Identity=32.1212121212121, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI282165704, Length=509, Percent_Identity=31.8271119842829, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI192807323, Length=495, Percent_Identity=32.1212121212121, Blast_Score=218, Evalue=3e-56, Organism=Homo sapiens, GI192807312, Length=495, Percent_Identity=32.1212121212121, Blast_Score=218, Evalue=3e-56, Organism=Homo sapiens, GI21071056, Length=495, Percent_Identity=32.1212121212121, Blast_Score=218, Evalue=3e-56, Organism=Homo sapiens, GI24308089, Length=533, Percent_Identity=30.2063789868668, Blast_Score=216, Evalue=7e-56, Organism=Homo sapiens, GI52630322, Length=507, Percent_Identity=31.5581854043393, Blast_Score=216, Evalue=9e-56, Organism=Homo sapiens, GI52630326, Length=507, Percent_Identity=31.5581854043393, Blast_Score=216, Evalue=1e-55, Organism=Homo sapiens, GI54112403, Length=509, Percent_Identity=32.6129666011788, Blast_Score=216, Evalue=1e-55, Organism=Homo sapiens, GI158420731, Length=507, Percent_Identity=31.5581854043393, Blast_Score=216, Evalue=1e-55, Organism=Homo sapiens, GI190358534, Length=525, Percent_Identity=30.6666666666667, Blast_Score=216, Evalue=1e-55, Organism=Homo sapiens, GI118421089, Length=474, Percent_Identity=31.4345991561181, Blast_Score=211, Evalue=5e-54, Organism=Homo sapiens, GI68299795, Length=483, Percent_Identity=32.0910973084886, Blast_Score=209, Evalue=2e-53, Organism=Homo sapiens, GI58219008, Length=531, Percent_Identity=29.5668549905838, Blast_Score=207, Evalue=6e-53, Organism=Homo sapiens, GI51599156, Length=533, Percent_Identity=29.6435272045028, Blast_Score=206, Evalue=1e-52, Organism=Homo sapiens, GI95147342, Length=511, Percent_Identity=31.7025440313112, Blast_Score=204, Evalue=3e-52, Organism=Homo sapiens, GI6912622, Length=517, Percent_Identity=30.5609284332689, Blast_Score=203, Evalue=6e-52, Organism=Homo sapiens, GI4557565, Length=519, Percent_Identity=29.4797687861272, Blast_Score=195, Evalue=2e-49, Organism=Homo sapiens, GI58331268, Length=512, Percent_Identity=28.7109375, Blast_Score=188, Evalue=2e-47, Organism=Homo sapiens, GI40807471, Length=581, Percent_Identity=27.5387263339071, Blast_Score=186, Evalue=1e-46, Organism=Homo sapiens, GI216548193, Length=562, Percent_Identity=26.6903914590747, Blast_Score=168, Evalue=2e-41, Organism=Homo sapiens, GI216548186, Length=562, Percent_Identity=26.6903914590747, Blast_Score=168, Evalue=2e-41, Organism=Homo sapiens, GI146219843, Length=337, Percent_Identity=32.3442136498516, Blast_Score=162, Evalue=2e-39, Organism=Homo sapiens, GI38708321, Length=319, Percent_Identity=30.4075235109718, Blast_Score=155, Evalue=3e-37, Organism=Homo sapiens, GI56549696, Length=314, Percent_Identity=32.8025477707006, Blast_Score=142, Evalue=3e-33, Organism=Homo sapiens, GI62860046, Length=494, Percent_Identity=25.7085020242915, Blast_Score=135, Evalue=3e-31, Organism=Homo sapiens, GI21071052, Length=149, Percent_Identity=46.3087248322148, Blast_Score=133, Evalue=1e-30, Organism=Homo sapiens, GI21071054, Length=149, Percent_Identity=46.3087248322148, Blast_Score=133, Evalue=1e-30, Organism=Homo sapiens, GI187761314, Length=430, Percent_Identity=28.8372093023256, Blast_Score=127, Evalue=9e-29, Organism=Homo sapiens, GI21071060, Length=430, Percent_Identity=28.8372093023256, Blast_Score=127, Evalue=9e-29, Organism=Homo sapiens, GI289547541, Length=172, Percent_Identity=30.2325581395349, Blast_Score=82, Evalue=4e-15, Organism=Homo sapiens, GI27436873, Length=149, Percent_Identity=32.2147651006711, Blast_Score=81, Evalue=5e-15, Organism=Homo sapiens, GI168823443, Length=159, Percent_Identity=32.0754716981132, Blast_Score=81, Evalue=5e-15, Organism=Homo sapiens, GI20336205, Length=144, Percent_Identity=31.25, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI20336209, Length=144, Percent_Identity=31.25, Blast_Score=69, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71988744, Length=517, Percent_Identity=31.7214700193424, Blast_Score=238, Evalue=1e-62, Organism=Caenorhabditis elegans, GI25144179, Length=466, Percent_Identity=30.2575107296137, Blast_Score=235, Evalue=1e-61, Organism=Caenorhabditis elegans, GI32563629, Length=502, Percent_Identity=30.8764940239044, Blast_Score=223, Evalue=6e-58, Organism=Caenorhabditis elegans, GI17539642, Length=487, Percent_Identity=31.006160164271, Blast_Score=213, Evalue=4e-55, Organism=Caenorhabditis elegans, GI193203140, Length=514, Percent_Identity=31.1284046692607, Blast_Score=213, Evalue=6e-55, Organism=Caenorhabditis elegans, GI17569817, Length=481, Percent_Identity=31.1850311850312, Blast_Score=208, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17551114, Length=481, Percent_Identity=30.7692307692308, Blast_Score=208, Evalue=2e-53, Organism=Caenorhabditis elegans, GI193204424, Length=497, Percent_Identity=30.784708249497, Blast_Score=205, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17562600, Length=479, Percent_Identity=29.8538622129436, Blast_Score=199, Evalue=7e-51, Organism=Caenorhabditis elegans, GI71991518, Length=518, Percent_Identity=27.992277992278, Blast_Score=185, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17508659, Length=482, Percent_Identity=28.2157676348548, Blast_Score=171, Evalue=3e-42, Organism=Caenorhabditis elegans, GI115534248, Length=330, Percent_Identity=33.030303030303, Blast_Score=166, Evalue=5e-41, Organism=Caenorhabditis elegans, GI71995707, Length=449, Percent_Identity=29.3986636971047, Blast_Score=166, Evalue=8e-41, Organism=Caenorhabditis elegans, GI25148958, Length=503, Percent_Identity=25.844930417495, Blast_Score=121, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17552194, Length=503, Percent_Identity=25.844930417495, Blast_Score=121, Evalue=2e-27, Organism=Caenorhabditis elegans, GI25148960, Length=503, Percent_Identity=25.844930417495, Blast_Score=121, Evalue=2e-27, Organism=Caenorhabditis elegans, GI193203249, Length=184, Percent_Identity=35.3260869565217, Blast_Score=113, Evalue=6e-25, Organism=Caenorhabditis elegans, GI17540630, Length=166, Percent_Identity=35.5421686746988, Blast_Score=104, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17561718, Length=137, Percent_Identity=37.2262773722628, Blast_Score=100, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17538806, Length=169, Percent_Identity=31.9526627218935, Blast_Score=88, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6325175, Length=520, Percent_Identity=30.5769230769231, Blast_Score=253, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6324879, Length=499, Percent_Identity=31.6633266533066, Blast_Score=238, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6319722, Length=483, Percent_Identity=31.6770186335404, Blast_Score=236, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6324864, Length=513, Percent_Identity=30.9941520467836, Blast_Score=221, Evalue=6e-58, Organism=Saccharomyces cerevisiae, GI6322065, Length=497, Percent_Identity=31.7907444668008, Blast_Score=214, Evalue=5e-56, Organism=Saccharomyces cerevisiae, GI6321012, Length=503, Percent_Identity=29.8210735586481, Blast_Score=209, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6322495, Length=518, Percent_Identity=27.4131274131274, Blast_Score=191, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6321275, Length=492, Percent_Identity=27.0325203252033, Blast_Score=179, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6319547, Length=513, Percent_Identity=28.6549707602339, Blast_Score=175, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6321289, Length=321, Percent_Identity=28.3489096573209, Blast_Score=157, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6319300, Length=296, Percent_Identity=33.7837837837838, Blast_Score=156, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6320541, Length=316, Percent_Identity=31.6455696202532, Blast_Score=155, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6321153, Length=278, Percent_Identity=34.8920863309352, Blast_Score=148, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6319590, Length=189, Percent_Identity=42.3280423280423, Blast_Score=140, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323060, Length=194, Percent_Identity=37.1134020618557, Blast_Score=120, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324765, Length=175, Percent_Identity=34.2857142857143, Blast_Score=117, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6323276, Length=144, Percent_Identity=29.1666666666667, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI281361889, Length=521, Percent_Identity=33.3973128598848, Blast_Score=260, Evalue=4e-69, Organism=Drosophila melanogaster, GI85724914, Length=523, Percent_Identity=32.887189292543, Blast_Score=238, Evalue=2e-62, Organism=Drosophila melanogaster, GI24583161, Length=523, Percent_Identity=32.887189292543, Blast_Score=236, Evalue=5e-62, Organism=Drosophila melanogaster, GI24653134, Length=465, Percent_Identity=31.8279569892473, Blast_Score=232, Evalue=1e-60, Organism=Drosophila melanogaster, GI24653132, Length=465, Percent_Identity=31.8279569892473, Blast_Score=232, Evalue=1e-60, Organism=Drosophila melanogaster, GI17737463, Length=465, Percent_Identity=31.8279569892473, Blast_Score=232, Evalue=1e-60, Organism=Drosophila melanogaster, GI24664907, Length=490, Percent_Identity=31.6326530612245, Blast_Score=221, Evalue=3e-57, Organism=Drosophila melanogaster, GI28574896, Length=490, Percent_Identity=31.6326530612245, Blast_Score=221, Evalue=3e-57, Organism=Drosophila melanogaster, GI24664914, Length=490, Percent_Identity=31.6326530612245, Blast_Score=221, Evalue=3e-57, Organism=Drosophila melanogaster, GI17985967, Length=490, Percent_Identity=31.6326530612245, Blast_Score=221, Evalue=3e-57, Organism=Drosophila melanogaster, GI17986031, Length=514, Percent_Identity=31.5175097276265, Blast_Score=213, Evalue=5e-55, Organism=Drosophila melanogaster, GI221330583, Length=514, Percent_Identity=31.3229571984436, Blast_Score=213, Evalue=7e-55, Organism=Drosophila melanogaster, GI24666729, Length=479, Percent_Identity=30.2713987473904, Blast_Score=212, Evalue=1e-54, Organism=Drosophila melanogaster, GI17137266, Length=482, Percent_Identity=29.8755186721992, Blast_Score=209, Evalue=1e-53, Organism=Drosophila melanogaster, GI62472261, Length=517, Percent_Identity=29.9806576402321, Blast_Score=200, Evalue=6e-51, Organism=Drosophila melanogaster, GI281366478, Length=517, Percent_Identity=29.9806576402321, Blast_Score=200, Evalue=6e-51, Organism=Drosophila melanogaster, GI24667055, Length=517, Percent_Identity=29.9806576402321, Blast_Score=200, Evalue=6e-51, Organism=Drosophila melanogaster, GI17136368, Length=523, Percent_Identity=29.4455066921606, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI28573600, Length=304, Percent_Identity=31.9078947368421, Blast_Score=158, Evalue=2e-38, Organism=Drosophila melanogaster, GI24656962, Length=304, Percent_Identity=31.9078947368421, Blast_Score=157, Evalue=3e-38, Organism=Drosophila melanogaster, GI24656966, Length=304, Percent_Identity=31.9078947368421, Blast_Score=157, Evalue=3e-38, Organism=Drosophila melanogaster, GI24648168, Length=280, Percent_Identity=32.1428571428571, Blast_Score=149, Evalue=1e-35, Organism=Drosophila melanogaster, GI85724912, Length=269, Percent_Identity=33.0855018587361, Blast_Score=140, Evalue=6e-33, Organism=Drosophila melanogaster, GI24581780, Length=505, Percent_Identity=25.7425742574257, Blast_Score=126, Evalue=1e-28, Organism=Drosophila melanogaster, GI24644932, Length=157, Percent_Identity=36.9426751592357, Blast_Score=106, Evalue=1e-22, Organism=Drosophila melanogaster, GI281361297, Length=177, Percent_Identity=35.0282485875706, Blast_Score=94, Evalue=6e-19, Organism=Drosophila melanogaster, GI62484263, Length=169, Percent_Identity=29.585798816568, Blast_Score=82, Evalue=3e-15, Organism=Drosophila melanogaster, GI21356675, Length=178, Percent_Identity=30.8988764044944, Blast_Score=74, Evalue=6e-13, Organism=Drosophila melanogaster, GI24650076, Length=178, Percent_Identity=30.8988764044944, Blast_Score=74, Evalue=6e-13, Organism=Drosophila melanogaster, GI24659216, Length=146, Percent_Identity=32.1917808219178, Blast_Score=74, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000330 - InterPro: IPR007527 [H]
Pfam domain/function: PF00271 Helicase_C; PF00176 SNF2_N; PF04434 SWIM [H]
EC number: NA
Molecular weight: Translated: 124722; Mature: 124722
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: PS00022 EGF_1 ; PS50966 ZF_SWIM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLANPLLRHLSQMPASGIYALADKVHLFNGFELCKRRPVTRVTWSGDGSVLTVEVSDA CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCEEEEEECCC GTYQVSLTLAQGEFSSVCNCGTWSPGGRCPHLVASLATVKKALAPASFPMLQLPQDYLEQ CEEEEEEEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHH IRNQLLGVPALRMDELHHRQSGEARYALVLDLELGSPRLRLTHDLIPAALFDAALPPSIR HHHHHCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCHHHH EFLRLMQSSALRGRCIEEFITRFRGRFPILYASAEGVVPLQFDHSSDRAVLLQLDLEGDE HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCEEEEEEECCCCC IAASFSLEDGSAPDPDSFVHQGYYFDLGRRLVQRVDDAGLVFYHSLFARVEEAMGVAPAR EEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC HGSGFRFPAPLFNSLQLDLGESQQGKGGAALSISGVPEQPRLVQPRYRLDIVELADPVPV CCCCCCCCCHHHCCEEECCCCCCCCCCCEEEEECCCCCCCCEECCHHHEEHHHHCCCCCH VAQGVTDGVIFGLSPVSFKFFSTRGRATLPQTLKAKKRVISVIRACFAALSAGSTAERER HHCCCCCCEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VVRQALDTPEFFKRGVRSEARAAVTSFCEAALAHGVVLQLSQQGEWLAVEVDGRQQGRLL HHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCCEE QIACDFFGCEIFWQAERPGEMTLARKELMKNLSRFCDALSAEGFSLAIGGEELQAVSWSF EEEHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHEEEEEEE TLDATRSSIDWFELRPEISCDGETVDDAELVRALQGGGIFRRGNEMVILDELSSNTLSLF EECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCEEECCCCEEEEECCCCCCEEEC GAATKREVVRVPRLQILDWITLRRSGVRILLSPEDERIFESLTRFESIPKRQAPARLLAT CCHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHH LRNYQLEGYSWLAFLYEHRFGACLADDMGLGKTIQAIALLAGIAEGDIPCELPTGTPHLV HHHCCCCCHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCEEE VVPPTLIFNWENELQRFYPALKVGVYRGQGRSAEFAGLDLVLTSYGVVQRDIEQLREIPF EECCEEEECCHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC NVIVFDEAQSVKNIHAETTGAVRRLSGRFKLTLTGTPVENHLGEYFSVMDLALPGLLGPY EEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHH EQFRKEMGREGGDFMEKLIRRTHPFILRRSKDMIADELPPKVETDIYLEMSTRQKALYAR HHHHHHHCCCCHHHHHHHHHHCCHHEEECCHHHHHHCCCCCCCCEEEEEECCHHHHHHHH TVAQVRETVALAYSSKSPGQARIIALTAILKLRQICLSSKLILPQAPDRSPKIDFLVDQL HHHHHHHHHHHEECCCCCCCEEHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHH MELFAEGHSVLVFSQFTSFLDIVEQGLSQHGIGFSRLDGSTPVSRRKEMVQRFQESAEPG HHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHCCCCC VFLLSLKAGGRGLNLTRASYVFHLDPWWNPAVESQASDRAHRIGQQRQVTITRLLMRHSI EEEEEEECCCCCCEEEEEEEEEEECCCCCCHHHCHHHHHHHHCCCCHHHHHHHHHHHHHH EEKMMELKKRKLKLYRALLEEAEHEGGNAISREDFEYLLG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC >Mature Secondary Structure MELLANPLLRHLSQMPASGIYALADKVHLFNGFELCKRRPVTRVTWSGDGSVLTVEVSDA CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCEEEEEECCC GTYQVSLTLAQGEFSSVCNCGTWSPGGRCPHLVASLATVKKALAPASFPMLQLPQDYLEQ CEEEEEEEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHH IRNQLLGVPALRMDELHHRQSGEARYALVLDLELGSPRLRLTHDLIPAALFDAALPPSIR HHHHHCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCHHHH EFLRLMQSSALRGRCIEEFITRFRGRFPILYASAEGVVPLQFDHSSDRAVLLQLDLEGDE HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCEEEEEEECCCCC IAASFSLEDGSAPDPDSFVHQGYYFDLGRRLVQRVDDAGLVFYHSLFARVEEAMGVAPAR EEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC HGSGFRFPAPLFNSLQLDLGESQQGKGGAALSISGVPEQPRLVQPRYRLDIVELADPVPV CCCCCCCCCHHHCCEEECCCCCCCCCCCEEEEECCCCCCCCEECCHHHEEHHHHCCCCCH VAQGVTDGVIFGLSPVSFKFFSTRGRATLPQTLKAKKRVISVIRACFAALSAGSTAERER HHCCCCCCEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VVRQALDTPEFFKRGVRSEARAAVTSFCEAALAHGVVLQLSQQGEWLAVEVDGRQQGRLL HHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCCEE QIACDFFGCEIFWQAERPGEMTLARKELMKNLSRFCDALSAEGFSLAIGGEELQAVSWSF EEEHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHEEEEEEE TLDATRSSIDWFELRPEISCDGETVDDAELVRALQGGGIFRRGNEMVILDELSSNTLSLF EECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCEEECCCCEEEEECCCCCCEEEC GAATKREVVRVPRLQILDWITLRRSGVRILLSPEDERIFESLTRFESIPKRQAPARLLAT CCHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHH LRNYQLEGYSWLAFLYEHRFGACLADDMGLGKTIQAIALLAGIAEGDIPCELPTGTPHLV HHHCCCCCHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCEEE VVPPTLIFNWENELQRFYPALKVGVYRGQGRSAEFAGLDLVLTSYGVVQRDIEQLREIPF EECCEEEECCHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC NVIVFDEAQSVKNIHAETTGAVRRLSGRFKLTLTGTPVENHLGEYFSVMDLALPGLLGPY EEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHH EQFRKEMGREGGDFMEKLIRRTHPFILRRSKDMIADELPPKVETDIYLEMSTRQKALYAR HHHHHHHCCCCHHHHHHHHHHCCHHEEECCHHHHHHCCCCCCCCEEEEEECCHHHHHHHH TVAQVRETVALAYSSKSPGQARIIALTAILKLRQICLSSKLILPQAPDRSPKIDFLVDQL HHHHHHHHHHHEECCCCCCCEEHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHH MELFAEGHSVLVFSQFTSFLDIVEQGLSQHGIGFSRLDGSTPVSRRKEMVQRFQESAEPG HHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHCCCCC VFLLSLKAGGRGLNLTRASYVFHLDPWWNPAVESQASDRAHRIGQQRQVTITRLLMRHSI EEEEEEECCCCCCEEEEEEEEEEECCCCCCHHHCHHHHHHHHCCCCHHHHHHHHHHHHHH EEKMMELKKRKLKLYRALLEEAEHEGGNAISREDFEYLLG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7569993; 8253680 [H]