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The map label for this gene is nudC [H]

Identifier: 197118847

GI number: 197118847

Start: 2859920

End: 2860816

Strand: Reverse

Name: nudC [H]

Synonym: Gbem_2470

Alternate gene names: 197118847

Gene position: 2860816-2859920 (Counterclockwise)

Preceding gene: 197118860

Following gene: 197118846

Centisome position: 61.99

GC content: 62.76

Gene sequence:

>897_bases
ATGTCCTATCCGGAAACGATCAACCTTCCTTTCAACGCCGAAATCATCAAGTCGAGATTCACGCAGATAAAGCCGAGCGG
CGCAGCCGAGGCCGGCCACGGGCACCTGGTGCTGCTGCAGGGGGAGACACTGGTCCTGGAGGGGGAGGGGCTCTTCCGCG
GCGAGCTTCCCATTGAGCTCGCCGCCGACGGGGCGCCGCTTCTCTTCGGCACCTGGGATGGGGATCCTGTCCGGGTTTAC
ACCCTGCCCAAGTCTCAGGTGCTCCCAGCCGGGCTCCAGGCGGTGCACTGGACCGCGCTTCCCGACGATCTCGCCACGCT
CTACGGCCTCGCCCGCCAGATCCTCTACTGGGAGAAGCTCAGCCGCCACTGCTCTCGCTGCGGCTCTAGCGACATGGAAC
GCATCTTTCCCACCTGGGGCAAGCGCTGCTCCGGCTGCGGCCACGAGCACTACCCTCATATCCACCCCTGCGTCATCGTC
CTCGTTAAACGCGGCGACGAGTTCCTCCTGGTGCGCAAACCCGAGTGGGCCGCCGGGCGCTTCAGCCTGGTTGCCGGTTT
CGTCGACTTCGGCGAGTCGCTCGAGGAGTGCGTGGTCAGGGAGGTACAGGAGGAAACGGGCCTTACCGTGGGCGACATCC
GCTACATCGGGAGCCAGAACTGGCCTTTCCCCAGCCAGTTGATGGCGGGCTTCGTCGCCAGCTATAAGTCCGGCGACCTG
AAGATCGACGGCGACGAGCTAGAGGAGGGGGGGGTGGTTCAGCCGGGATCGCATGCCCGATTCGCTTCCTCCCAGCCGCA
GCATCGCGCGCTTCATCATCGACCGTTTTGCGTTAGGAGCGGGTGCTTAAAAAAATCATTAAAGTATTTTCGACCCGATC
CGATAGCTTTTTATTAG

Upstream 100 bases:

>100_bases
CCAAAAGGGGGCGCAACCTAATGAAACCCGTTGCTTCCACTGGCCGTTCCTGTATTATGCCTGTCACTGCAAAGAGACCT
ACTGTTCCAGGAGTTGCCAC

Downstream 100 bases:

>100_bases
TACCCCGGAGTAAACAACCCAGGGTCTCCTTTTTCGGGGGGTGGTTGGCGCCATCCCCCATTTTTTATCTCCGCACCGCC
TTTCTTCCCTTGGAAAACCT

Product: NADH pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSYPETINLPFNAEIIKSRFTQIKPSGAAEAGHGHLVLLQGETLVLEGEGLFRGELPIELAADGAPLLFGTWDGDPVRVY
TLPKSQVLPAGLQAVHWTALPDDLATLYGLARQILYWEKLSRHCSRCGSSDMERIFPTWGKRCSGCGHEHYPHIHPCVIV
LVKRGDEFLLVRKPEWAAGRFSLVAGFVDFGESLEECVVREVQEETGLTVGDIRYIGSQNWPFPSQLMAGFVASYKSGDL
KIDGDELEEGGVVQPGSHARFASSQPQHRALHHRPFCVRSGCLKKSLKYFRPDPIAFY

Sequences:

>Translated_298_residues
MSYPETINLPFNAEIIKSRFTQIKPSGAAEAGHGHLVLLQGETLVLEGEGLFRGELPIELAADGAPLLFGTWDGDPVRVY
TLPKSQVLPAGLQAVHWTALPDDLATLYGLARQILYWEKLSRHCSRCGSSDMERIFPTWGKRCSGCGHEHYPHIHPCVIV
LVKRGDEFLLVRKPEWAAGRFSLVAGFVDFGESLEECVVREVQEETGLTVGDIRYIGSQNWPFPSQLMAGFVASYKSGDL
KIDGDELEEGGVVQPGSHARFASSQPQHRALHHRPFCVRSGCLKKSLKYFRPDPIAFY
>Mature_297_residues
SYPETINLPFNAEIIKSRFTQIKPSGAAEAGHGHLVLLQGETLVLEGEGLFRGELPIELAADGAPLLFGTWDGDPVRVYT
LPKSQVLPAGLQAVHWTALPDDLATLYGLARQILYWEKLSRHCSRCGSSDMERIFPTWGKRCSGCGHEHYPHIHPCVIVL
VKRGDEFLLVRKPEWAAGRFSLVAGFVDFGESLEECVVREVQEETGLTVGDIRYIGSQNWPFPSQLMAGFVASYKSGDLK
IDGDELEEGGVVQPGSHARFASSQPQHRALHHRPFCVRSGCLKKSLKYFRPDPIAFY

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=174, Percent_Identity=33.9080459770115, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI50593112, Length=150, Percent_Identity=36.6666666666667, Blast_Score=96, Evalue=5e-20,
Organism=Escherichia coli, GI48994995, Length=209, Percent_Identity=36.3636363636364, Blast_Score=130, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI71986510, Length=139, Percent_Identity=37.410071942446, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI212645999, Length=139, Percent_Identity=37.410071942446, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6321371, Length=183, Percent_Identity=26.775956284153, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 33088; Mature: 32957

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYPETINLPFNAEIIKSRFTQIKPSGAAEAGHGHLVLLQGETLVLEGEGLFRGELPIEL
CCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEECCCEEECCCCEEE
AADGAPLLFGTWDGDPVRVYTLPKSQVLPAGLQAVHWTALPDDLATLYGLARQILYWEKL
ECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
SRHCSRCGSSDMERIFPTWGKRCSGCGHEHYPHIHPCVIVLVKRGDEFLLVRKPEWAAGR
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCH
FSLVAGFVDFGESLEECVVREVQEETGLTVGDIRYIGSQNWPFPSQLMAGFVASYKSGDL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHEEEECCCCCCCHHHHHHHHHHHCCCCCE
KIDGDELEEGGVVQPGSHARFASSQPQHRALHHRPFCVRSGCLKKSLKYFRPDPIAFY
EECCCHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SYPETINLPFNAEIIKSRFTQIKPSGAAEAGHGHLVLLQGETLVLEGEGLFRGELPIEL
CCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEECCCEEECCCCEEE
AADGAPLLFGTWDGDPVRVYTLPKSQVLPAGLQAVHWTALPDDLATLYGLARQILYWEKL
ECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
SRHCSRCGSSDMERIFPTWGKRCSGCGHEHYPHIHPCVIVLVKRGDEFLLVRKPEWAAGR
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCH
FSLVAGFVDFGESLEECVVREVQEETGLTVGDIRYIGSQNWPFPSQLMAGFVASYKSGDL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHEEEECCCCCCCHHHHHHHHHHHCCCCCE
KIDGDELEEGGVVQPGSHARFASSQPQHRALHHRPFCVRSGCLKKSLKYFRPDPIAFY
EECCCHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA