Click here to switch to the map view.

The map label for this gene is mreD

Identifier: 197118838

GI number: 197118838

Start: 2851170

End: 2851652

Strand: Reverse

Name: mreD

Synonym: Gbem_2461

Alternate gene names: NA

Gene position: 2851652-2851170 (Counterclockwise)

Preceding gene: 197118839

Following gene: 197118837

Centisome position: 61.79

GC content: 59.01

Gene sequence:

>483_bases
TTGATTGCTTATCTGAAAATAACGGGAATCGTTCTCGCCGCCTGCCTGCTCCAGATGACGCTTCTCCCCAGGTACCTGCT
GGATCCCTTCCAGCCCAACCTGCTCATCATCCTCGTGGTCTACCTGGGACTTAAGGCGCCGCACCGCTTGGCCGGGCTGG
CCGCTTTCGCTCTGGGACTGCTCCAGGACAGCTTTTCCGGCATGTACCTCGGGCTGCACGCCTTCTCCTATCTCTGCATT
TACCTGCTGTTGTCCGAGCTGGCCGACCGGCTCTATACCGACAACCGGTTGTTGTTCGTGCTGGTGGTCCTTCTGGCCAC
CGTGTTCAGCGCCGCCTTGAACCTGCTCATGCTTGCCGTTTTTTCCGTGTCACAAGGGGTTTACGCCTCGCTGCTGCCGG
CCCTGATACCCCAGGCGCTGGTAAACGCGCTGATAGCTTCGCTTTTTTTCGGCGTGAGGCTTCCGGTGGAGGAGGCTAGA
TGA

Upstream 100 bases:

>100_bases
ATTGAGGTCCGTCCCACGGTCAACATCGGCAAGCTAGAGGAGATGCTGGTGCTGGTCCGGCAGCAACAACAATAGTGTCC
ATCACAAGCGAGTCACAGCT

Downstream 100 bases:

>100_bases
AGCACAACATACTTCCCGACGACGACGGGGGCGGCCGCCGCATCATCGGCCTCTCCTTAGGCGCCTTCGCCATTTTTTTC
CTGCTATTGTCCAGGCTCTG

Product: rod shape-determining lipoprotein MreD

Products: NA

Alternate protein names: Rod Shape-Determining Lipoprotein MreD

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MIAYLKITGIVLAACLLQMTLLPRYLLDPFQPNLLIILVVYLGLKAPHRLAGLAAFALGLLQDSFSGMYLGLHAFSYLCI
YLLLSELADRLYTDNRLLFVLVVLLATVFSAALNLLMLAVFSVSQGVYASLLPALIPQALVNALIASLFFGVRLPVEEAR

Sequences:

>Translated_160_residues
MIAYLKITGIVLAACLLQMTLLPRYLLDPFQPNLLIILVVYLGLKAPHRLAGLAAFALGLLQDSFSGMYLGLHAFSYLCI
YLLLSELADRLYTDNRLLFVLVVLLATVFSAALNLLMLAVFSVSQGVYASLLPALIPQALVNALIASLFFGVRLPVEEAR
>Mature_160_residues
MIAYLKITGIVLAACLLQMTLLPRYLLDPFQPNLLIILVVYLGLKAPHRLAGLAAFALGLLQDSFSGMYLGLHAFSYLCI
YLLLSELADRLYTDNRLLFVLVVLLATVFSAALNLLMLAVFSVSQGVYASLLPALIPQALVNALIASLFFGVRLPVEEAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17485; Mature: 17485

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAYLKITGIVLAACLLQMTLLPRYLLDPFQPNLLIILVVYLGLKAPHRLAGLAAFALGL
CEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LQDSFSGMYLGLHAFSYLCIYLLLSELADRLYTDNRLLFVLVVLLATVFSAALNLLMLAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FSVSQGVYASLLPALIPQALVNALIASLFFGVRLPVEEAR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MIAYLKITGIVLAACLLQMTLLPRYLLDPFQPNLLIILVVYLGLKAPHRLAGLAAFALGL
CEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LQDSFSGMYLGLHAFSYLCIYLLLSELADRLYTDNRLLFVLVVLLATVFSAALNLLMLAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FSVSQGVYASLLPALIPQALVNALIASLFFGVRLPVEEAR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA