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The map label for this gene is 197118833

Identifier: 197118833

GI number: 197118833

Start: 2845186

End: 2846199

Strand: Reverse

Name: 197118833

Synonym: Gbem_2456

Alternate gene names: NA

Gene position: 2846199-2845186 (Counterclockwise)

Preceding gene: 197118835

Following gene: 197118832

Centisome position: 61.67

GC content: 62.92

Gene sequence:

>1014_bases
ATGAAGGAAGCGATGTTCTATGAAAAGCTCGACGGGGAGCGGGTTCGCTGCGGCTTGTGCCGCTTCCGCTGTCTGATCGG
CAGCGGCAAGTTCGGACATTGCAGGGTACGCCAGAACCGCCAAGGGGTGCTCTATTCGCTGGTCTATGGCCGCGCCGTCG
CGGAGCACGTGGACCCCATCGAGAAAAAGCCCCTTTTTCACCTGCTTCCGGGGAGCCGCTCCTATTCCGTCGCCACTGTC
GGGTGCAATTTCCGGTGCCTGCACTGCCAGAACTACAGCATCTCCCAGCCTGACGAGCTAAGCGTGGAGCGCTCGGGCTT
TTCCCTTTCCCCGGGACAGATCGTGGAGCGCGCGCAGGCTTGCGGCTGCCGTTCCATCGCCTACACCTACACCGAGCCTA
CCATCTTCTTCGAATACGCCTTCGAGACGGCGAAACTCGCCCGCGCGGCAGGGCTCAAAAACATCTTCGTCACCAACGGC
TACATCACCAGCGAGGCGCTGCAGACGATAGCGCCGTATCTCGACGCGGCCAACATAGACCTGAAGGCCTTCAGCGAGAG
CTTTTACCGCGAGGTGGTGGGCGCCTCGCTGGACGAGGTGCTCGACTGCATCAGGGAGTACAAAAGGCTCGGCATCTGGC
TCGAGATCACCACCCTGGTGATACCCAACCGCAACGACTCCGATCGGGAGCTGCGCGACATCGCGCGCTTCATAGCTGAG
GAGGTCGGTGTGGATACCCCCTGGCACGTGAGCCAGTTCTATCCCACCTATCGCCTGATGGACGAGCCCCGCACCCCCGT
CGCCACCTTGAGAAAAGCACGCGACTTCGGGCTTGAGGCCGGACTGCGCTACGTCTACGAGGGTAACGTCCCCGGGGAGG
GGGGGGAGAACAGCTACTGCCCTGGCTGCGGCGCGCTCGTCATCGCCAGGTACGGGTATGTGGTGGAGAAAAACCTCCTG
GCGCAGGGGCGCTGTCCCGCCTGCGGCGCCGGGGTGGAGGGAGTTTGGAGCTGA

Upstream 100 bases:

>100_bases
TGAAATTTTCCAATTTTCAGCTGGAGTTTTTCCCTTTTGGATGCTATGTTTGCCGCCGCTAATTTTTTCTCCCGAGGCTG
AGGCTCAAGGAGGGGTGACC

Downstream 100 bases:

>100_bases
AGTCGCGCGTTTTTAGCTGGGCCAGGCTCTCCGAGCCCGGAGCCAAATCCTTCCTGCTCCAGGCGCTGCTGGGGGGTGGG
CTTACCTTCCTCTTCTGGCT

Product: radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKEAMFYEKLDGERVRCGLCRFRCLIGSGKFGHCRVRQNRQGVLYSLVYGRAVAEHVDPIEKKPLFHLLPGSRSYSVATV
GCNFRCLHCQNYSISQPDELSVERSGFSLSPGQIVERAQACGCRSIAYTYTEPTIFFEYAFETAKLARAAGLKNIFVTNG
YITSEALQTIAPYLDAANIDLKAFSESFYREVVGASLDEVLDCIREYKRLGIWLEITTLVIPNRNDSDRELRDIARFIAE
EVGVDTPWHVSQFYPTYRLMDEPRTPVATLRKARDFGLEAGLRYVYEGNVPGEGGENSYCPGCGALVIARYGYVVEKNLL
AQGRCPACGAGVEGVWS

Sequences:

>Translated_337_residues
MKEAMFYEKLDGERVRCGLCRFRCLIGSGKFGHCRVRQNRQGVLYSLVYGRAVAEHVDPIEKKPLFHLLPGSRSYSVATV
GCNFRCLHCQNYSISQPDELSVERSGFSLSPGQIVERAQACGCRSIAYTYTEPTIFFEYAFETAKLARAAGLKNIFVTNG
YITSEALQTIAPYLDAANIDLKAFSESFYREVVGASLDEVLDCIREYKRLGIWLEITTLVIPNRNDSDRELRDIARFIAE
EVGVDTPWHVSQFYPTYRLMDEPRTPVATLRKARDFGLEAGLRYVYEGNVPGEGGENSYCPGCGALVIARYGYVVEKNLL
AQGRCPACGAGVEGVWS
>Mature_337_residues
MKEAMFYEKLDGERVRCGLCRFRCLIGSGKFGHCRVRQNRQGVLYSLVYGRAVAEHVDPIEKKPLFHLLPGSRSYSVATV
GCNFRCLHCQNYSISQPDELSVERSGFSLSPGQIVERAQACGCRSIAYTYTEPTIFFEYAFETAKLARAAGLKNIFVTNG
YITSEALQTIAPYLDAANIDLKAFSESFYREVVGASLDEVLDCIREYKRLGIWLEITTLVIPNRNDSDRELRDIARFIAE
EVGVDTPWHVSQFYPTYRLMDEPRTPVATLRKARDFGLEAGLRYVYEGNVPGEGGENSYCPGCGALVIARYGYVVEKNLL
AQGRCPACGAGVEGVWS

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37680; Mature: 37680

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEAMFYEKLDGERVRCGLCRFRCLIGSGKFGHCRVRQNRQGVLYSLVYGRAVAEHVDPI
CCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEHHHHHHHHHHHHCCCC
EKKPLFHLLPGSRSYSVATVGCNFRCLHCQNYSISQPDELSVERSGFSLSPGQIVERAQA
CCCCEEEECCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHH
CGCRSIAYTYTEPTIFFEYAFETAKLARAAGLKNIFVTNGYITSEALQTIAPYLDAANID
CCCCEEEEEECCCEEEEEEHHHHHHHHHHCCCCEEEEECCEEHHHHHHHHHHHHCCCCCH
LKAFSESFYREVVGASLDEVLDCIREYKRLGIWLEITTLVIPNRNDSDRELRDIARFIAE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHH
EVGVDTPWHVSQFYPTYRLMDEPRTPVATLRKARDFGLEAGLRYVYEGNVPGEGGENSYC
HHCCCCCCCHHHHCCHHHCCCCCCCHHHHHHHHHHCCHHHCCEEEEECCCCCCCCCCCCC
PGCGALVIARYGYVVEKNLLAQGRCPACGAGVEGVWS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKEAMFYEKLDGERVRCGLCRFRCLIGSGKFGHCRVRQNRQGVLYSLVYGRAVAEHVDPI
CCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEHHHHHHHHHHHHCCCC
EKKPLFHLLPGSRSYSVATVGCNFRCLHCQNYSISQPDELSVERSGFSLSPGQIVERAQA
CCCCEEEECCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHH
CGCRSIAYTYTEPTIFFEYAFETAKLARAAGLKNIFVTNGYITSEALQTIAPYLDAANID
CCCCEEEEEECCCEEEEEEHHHHHHHHHHCCCCEEEEECCEEHHHHHHHHHHHHCCCCCH
LKAFSESFYREVVGASLDEVLDCIREYKRLGIWLEITTLVIPNRNDSDRELRDIARFIAE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHH
EVGVDTPWHVSQFYPTYRLMDEPRTPVATLRKARDFGLEAGLRYVYEGNVPGEGGENSYC
HHCCCCCCCHHHHCCHHHCCCCCCCHHHHHHHHHHCCHHHCCEEEEECCCCCCCCCCCCC
PGCGALVIARYGYVVEKNLLAQGRCPACGAGVEGVWS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]