| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118835
Identifier: 197118835
GI number: 197118835
Start: 2846886
End: 2848022
Strand: Reverse
Name: 197118835
Synonym: Gbem_2458
Alternate gene names: NA
Gene position: 2848022-2846886 (Counterclockwise)
Preceding gene: 197118836
Following gene: 197118833
Centisome position: 61.71
GC content: 65.96
Gene sequence:
>1137_bases ATGCGCATCACCCTGGTCGAGCCCTACTTCACCGGTTCCCATGCCGCCTGGGCGAGGGAATACGCGGCGCACAGCAGCCA CGAGGTCGAGCTCCTGACGCTCCCCGGCCGCAACTGGAAGTGGCGCATGCACGGCGGCGCAGTGACCCTTGCCTCCCGCT TTTTGGAGCTGCCGCGGCCGGACCTGATCCTTGCCACCGACATGCTCGACCTCACCACCTTCCTGGCGCTCACCCGCAAC CAGAGCCACGGCATTCGCACCGCGCTCTACTTCCACGAGAACCAGCTCACCTATCCCTGGTCCCCCTCCGACCAGGACCC GGCCCTGCAAAGGGATCTGCACTACGCCTTCATCAACTACGCGAGCGCTCTGGCGGCCGATGCGGTCCTCTTCAACTCCC GCTACCATCGAGACTCTTTCCTGGGGGCGCTCCCCGCGTTTCTGAAGGGGTTCCCCGACGCGGTAGACGCAGATTCTGCT GCGCGCATCGGGGAAAAGAGCCGGGTGCTCCCGTTGGGGCTCGACCTGCACAAGCTGGACCGGCACCGCCCGCAGGCGGG CGAGGGTGCCCGGGCGCCGTTGTTACTTTGGAACCATCGCTGGGAGTTCGACAAGGCGCCGGAACCGTTTTTCGAGGCGC TTTACCAACTGGCGGACGAGGGGGTCGAGTTCGAGGTGGCGGTGGTGGGGGAGTCCTTCGGACGCGCCCCCGGGGTGTTC CGGCAGGCGCGCGAACGGCTAGGCTGCCGCGTGGCGCAGTGGGGATTCCTGGAACGTTTCTCCGATTACGCCGCCTGGCT TTGGAGGGCCGACATCCTGCCGGTCACCTCGCGGCAGGAGTTCTTCGGTGCCAGCGCGGTGCAGGCGCTTTACTGCGGCT GCCGCCCCCTTTTCCCGGACCGGCTCGCCTACCCGGAGCATGTGCCTGTCGAGGCGCGGGAAAAGGTGCTCTACCGCGAA GAGGAAGCATTCGTGGACAGGCTGAGAACGCTGATACTTGACCGGGAAGACGGTGCGGCGCTGGACGGTTTCGTGGAACG CTACGACTGGGAAAAGCTGGCGCCTGTTTACGACAGCTTTCTGGAAGGGGTTGCCGCGGGAGTTGACGGGGTGGTGCCGG AGGTTACTGCCTGGTAG
Upstream 100 bases:
>100_bases TCAGCATGCGGCGCTTCATGTTCTAAGCCCCCTGGAGGCTCGGGGATTTCGTCGTCAATTGTCAATCGTCAATTGTCAAT TGGTTTAGAGGAGCTGCAGC
Downstream 100 bases:
>100_bases TGGTAGGGGACGTGCTGCGCGAGGAAACGGAGGGGGGCGCGTCGGCGCCCCCATTCCCGATCAGGCTGCTTGCTGCTCTC TGTTCACCATGATGATCTTG
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyltransferase-Like Protein; Glycosyltransferase Family 4 Domain Protein; Glycosyl Transferase Group 1 Family Protein
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MRITLVEPYFTGSHAAWAREYAAHSSHEVELLTLPGRNWKWRMHGGAVTLASRFLELPRPDLILATDMLDLTTFLALTRN QSHGIRTALYFHENQLTYPWSPSDQDPALQRDLHYAFINYASALAADAVLFNSRYHRDSFLGALPAFLKGFPDAVDADSA ARIGEKSRVLPLGLDLHKLDRHRPQAGEGARAPLLLWNHRWEFDKAPEPFFEALYQLADEGVEFEVAVVGESFGRAPGVF RQARERLGCRVAQWGFLERFSDYAAWLWRADILPVTSRQEFFGASAVQALYCGCRPLFPDRLAYPEHVPVEAREKVLYRE EEAFVDRLRTLILDREDGAALDGFVERYDWEKLAPVYDSFLEGVAAGVDGVVPEVTAW
Sequences:
>Translated_378_residues MRITLVEPYFTGSHAAWAREYAAHSSHEVELLTLPGRNWKWRMHGGAVTLASRFLELPRPDLILATDMLDLTTFLALTRN QSHGIRTALYFHENQLTYPWSPSDQDPALQRDLHYAFINYASALAADAVLFNSRYHRDSFLGALPAFLKGFPDAVDADSA ARIGEKSRVLPLGLDLHKLDRHRPQAGEGARAPLLLWNHRWEFDKAPEPFFEALYQLADEGVEFEVAVVGESFGRAPGVF RQARERLGCRVAQWGFLERFSDYAAWLWRADILPVTSRQEFFGASAVQALYCGCRPLFPDRLAYPEHVPVEAREKVLYRE EEAFVDRLRTLILDREDGAALDGFVERYDWEKLAPVYDSFLEGVAAGVDGVVPEVTAW >Mature_378_residues MRITLVEPYFTGSHAAWAREYAAHSSHEVELLTLPGRNWKWRMHGGAVTLASRFLELPRPDLILATDMLDLTTFLALTRN QSHGIRTALYFHENQLTYPWSPSDQDPALQRDLHYAFINYASALAADAVLFNSRYHRDSFLGALPAFLKGFPDAVDADSA ARIGEKSRVLPLGLDLHKLDRHRPQAGEGARAPLLLWNHRWEFDKAPEPFFEALYQLADEGVEFEVAVVGESFGRAPGVF RQARERLGCRVAQWGFLERFSDYAAWLWRADILPVTSRQEFFGASAVQALYCGCRPLFPDRLAYPEHVPVEAREKVLYRE EEAFVDRLRTLILDREDGAALDGFVERYDWEKLAPVYDSFLEGVAAGVDGVVPEVTAW
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI54859763, Length=138, Percent_Identity=42.7536231884058, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI257467510, Length=138, Percent_Identity=42.7536231884058, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI40254965, Length=185, Percent_Identity=29.1891891891892, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24642323, Length=380, Percent_Identity=32.6315789473684, Blast_Score=187, Evalue=8e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42912; Mature: 42912
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITLVEPYFTGSHAAWAREYAAHSSHEVELLTLPGRNWKWRMHGGAVTLASRFLELPRP CEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHCCCC DLILATDMLDLTTFLALTRNQSHGIRTALYFHENQLTYPWSPSDQDPALQRDLHYAFINY CEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHHH ASALAADAVLFNSRYHRDSFLGALPAFLKGFPDAVDADSAARIGEKSRVLPLGLDLHKLD HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEECCCHHHHH RHRPQAGEGARAPLLLWNHRWEFDKAPEPFFEALYQLADEGVEFEVAVVGESFGRAPGVF CCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHH RQARERLGCRVAQWGFLERFSDYAAWLWRADILPVTSRQEFFGASAVQALYCGCRPLFPD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCH RLAYPEHVPVEAREKVLYREEEAFVDRLRTLILDREDGAALDGFVERYDWEKLAPVYDSF HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHH LEGVAAGVDGVVPEVTAW HHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRITLVEPYFTGSHAAWAREYAAHSSHEVELLTLPGRNWKWRMHGGAVTLASRFLELPRP CEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHCCCC DLILATDMLDLTTFLALTRNQSHGIRTALYFHENQLTYPWSPSDQDPALQRDLHYAFINY CEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHHH ASALAADAVLFNSRYHRDSFLGALPAFLKGFPDAVDADSAARIGEKSRVLPLGLDLHKLD HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEECCCHHHHH RHRPQAGEGARAPLLLWNHRWEFDKAPEPFFEALYQLADEGVEFEVAVVGESFGRAPGVF CCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHH RQARERLGCRVAQWGFLERFSDYAAWLWRADILPVTSRQEFFGASAVQALYCGCRPLFPD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCH RLAYPEHVPVEAREKVLYREEEAFVDRLRTLILDREDGAALDGFVERYDWEKLAPVYDSF HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHH LEGVAAGVDGVVPEVTAW HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA