| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118784
Identifier: 197118784
GI number: 197118784
Start: 2783351
End: 2784301
Strand: Reverse
Name: 197118784
Synonym: Gbem_2405
Alternate gene names: NA
Gene position: 2784301-2783351 (Counterclockwise)
Preceding gene: 197118787
Following gene: 197118783
Centisome position: 60.33
GC content: 63.93
Gene sequence:
>951_bases ATGTTCATCAACGACGAAAGCCAGAAGCAGGTTCTTCCCATCCTCGCCAAGACCGCGGTCACCCCCGTTGTGGAGGTACA GCAGCGCGCGAGTCAACTGCTGCAGCTGAACCCCGGGCAGCAGGTGAAGGCCGAGATCATCTCCAACCTTCCTAACAGCC TCTACCTTGCGCGCGTGGCGGGCGAACTGTACCACCTTGAGATACCCCTGAACGTGGCGCCCGGCGAGACCTTGGAGCTT ACCTTTCTCACCGCCGATCCGCGCATCACCTTCCAGGTGATGCGGCCGGAGGTAGGGGAGTCGGTGAAGCTTAGCTCGAT GGGGAAGTGGCTGGCAGACGTGGTGAAGAACGCACCTTCGCTGCAAGCTCCCCAGGAGCCTCTACTGGAATCCCCGGAGC AGGCCTCTGCCCAACTGGCGGGCAAGCTGAAGAGCGCGCTCACCCAGTCCGGCCTTTTCTACGAGTCCCACCTGGCCCAA TGGGCCGGCGGTGCGCTGCAGTTGAAAGAGCTTTTGAAAGAGCCGCAGGGGAAGCTTTCCCGTGCCGCTGCCGAGGTGGA GGGAGATGAGGGGGGAGGGAAGGAGAGCTCTGCTGCCGGTTTCGCCGACAGCCGCACGCTGCCGCTGATAAAAGAGCAAC TGCTGCTTTTGAACTCCGGGGTGCTGGCCTGGCGCGGAGAGGCCTGGCCCGGCCAGGAGATGGAACTCGCCATCCGCGAG GGGGACGACGAGAAGTGGGAGCAGGGGGTCGAGGCTACGGTGTCACTCGAACTGCCGCGGCTGGGGGGGGTGGAGGCGAC GCTGCGCTTCTCGGCCGAAGGGATCTCCATCGACTGCGTCTGCAGCAACCCCGGCGCCTCCGACCTGATGCGAAACCAGA GCGCGGAACTGCGGACGAGGCTTTCCTCGTGCGGGCTGCACCTGACCAGATTGGCGGCTAAAGATGGCTAA
Upstream 100 bases:
>100_bases AGCAGCCGCCATCTTCATGAACTTTTAAGCCCTCCCTGAATGGCTGGCTCCTTTTACCGTACAGCCGAAATAGCGCTTTC CTGCACCACAGGATTCGGAC
Downstream 100 bases:
>100_bases GCGTCCCAGCGAAATGAAGCGCGCGGTGGCCATGGCCTACAGCGGCGAAGACGGCGCCCCAAGGGTGGTGGCAAAGGGAA GCGGCGTCACCGCCGAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MFINDESQKQVLPILAKTAVTPVVEVQQRASQLLQLNPGQQVKAEIISNLPNSLYLARVAGELYHLEIPLNVAPGETLEL TFLTADPRITFQVMRPEVGESVKLSSMGKWLADVVKNAPSLQAPQEPLLESPEQASAQLAGKLKSALTQSGLFYESHLAQ WAGGALQLKELLKEPQGKLSRAAAEVEGDEGGGKESSAAGFADSRTLPLIKEQLLLLNSGVLAWRGEAWPGQEMELAIRE GDDEKWEQGVEATVSLELPRLGGVEATLRFSAEGISIDCVCSNPGASDLMRNQSAELRTRLSSCGLHLTRLAAKDG
Sequences:
>Translated_316_residues MFINDESQKQVLPILAKTAVTPVVEVQQRASQLLQLNPGQQVKAEIISNLPNSLYLARVAGELYHLEIPLNVAPGETLEL TFLTADPRITFQVMRPEVGESVKLSSMGKWLADVVKNAPSLQAPQEPLLESPEQASAQLAGKLKSALTQSGLFYESHLAQ WAGGALQLKELLKEPQGKLSRAAAEVEGDEGGGKESSAAGFADSRTLPLIKEQLLLLNSGVLAWRGEAWPGQEMELAIRE GDDEKWEQGVEATVSLELPRLGGVEATLRFSAEGISIDCVCSNPGASDLMRNQSAELRTRLSSCGLHLTRLAAKDG >Mature_316_residues MFINDESQKQVLPILAKTAVTPVVEVQQRASQLLQLNPGQQVKAEIISNLPNSLYLARVAGELYHLEIPLNVAPGETLEL TFLTADPRITFQVMRPEVGESVKLSSMGKWLADVVKNAPSLQAPQEPLLESPEQASAQLAGKLKSALTQSGLFYESHLAQ WAGGALQLKELLKEPQGKLSRAAAEVEGDEGGGKESSAAGFADSRTLPLIKEQLLLLNSGVLAWRGEAWPGQEMELAIRE GDDEKWEQGVEATVSLELPRLGGVEATLRFSAEGISIDCVCSNPGASDLMRNQSAELRTRLSSCGLHLTRLAAKDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34041; Mature: 34041
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFINDESQKQVLPILAKTAVTPVVEVQQRASQLLQLNPGQQVKAEIISNLPNSLYLARVA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHH GELYHLEIPLNVAPGETLELTFLTADPRITFQVMRPEVGESVKLSSMGKWLADVVKNAPS CCEEEEEEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCC LQAPQEPLLESPEQASAQLAGKLKSALTQSGLFYESHLAQWAGGALQLKELLKEPQGKLS CCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHH RAAAEVEGDEGGGKESSAAGFADSRTLPLIKEQLLLLNSGVLAWRGEAWPGQEMELAIRE HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEC GDDEKWEQGVEATVSLELPRLGGVEATLRFSAEGISIDCVCSNPGASDLMRNQSAELRTR CCHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCEEEEEEECCCCHHHHHHCCHHHHHHH LSSCGLHLTRLAAKDG HHHCCHHHHHHHCCCC >Mature Secondary Structure MFINDESQKQVLPILAKTAVTPVVEVQQRASQLLQLNPGQQVKAEIISNLPNSLYLARVA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHH GELYHLEIPLNVAPGETLELTFLTADPRITFQVMRPEVGESVKLSSMGKWLADVVKNAPS CCEEEEEEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCC LQAPQEPLLESPEQASAQLAGKLKSALTQSGLFYESHLAQWAGGALQLKELLKEPQGKLS CCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHH RAAAEVEGDEGGGKESSAAGFADSRTLPLIKEQLLLLNSGVLAWRGEAWPGQEMELAIRE HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEC GDDEKWEQGVEATVSLELPRLGGVEATLRFSAEGISIDCVCSNPGASDLMRNQSAELRTR CCHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCEEEEEEECCCCHHHHHHCCHHHHHHH LSSCGLHLTRLAAKDG HHHCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA