Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is rimI [H]

Identifier: 197118780

GI number: 197118780

Start: 2780674

End: 2781123

Strand: Reverse

Name: rimI [H]

Synonym: Gbem_2401

Alternate gene names: 197118780

Gene position: 2781123-2780674 (Counterclockwise)

Preceding gene: 197118783

Following gene: 197118779

Centisome position: 60.26

GC content: 58.22

Gene sequence:

>450_bases
ATGCGTTGCGATGAGCTCAAAGCGGTGCTCGAAATAGAGTCCGCATCGTTTTCGAGACCGTGGACCGAGCAGCACTTCCA
GTACGAAATCGACTCGCCTTTCGGCCATCCAATGGTGGCCCTCGCCGATAACGGAACCCTCACTGGCTACCTCTGTCTCA
AGCTTGTCCTGGACGAGGCCGAGATACTCGACGTCGCCGTCGGGAACTCTCATAGGGGGAAGGGGATCGGGAGACTCCTG
GTGCAATGGGCGCTCGATTTCAGCCGCGAGCACGGGGCATCTGTATTGTTTCTGGAGGTGCGCGCCGGAAACGCGGAAGC
CATCGCGCTCTACCGATCCTTCGGGTTCAGGGAATCGGGGCGCCGCAAGAACTATTACGACAATGGCGAAGACGCCATCT
TGATGGAGATGCCGGTCTGCCGGCAGTCAGAGGAGAATCATGCAGTTTAA

Upstream 100 bases:

>100_bases
CCTCGAAAAGTCAAAGCGAAAAAATTGTTTACTTCGCCTTGGCGTTTGCTTATGATGCCTTGCTGTGCCTGATCTCAGGG
AGAAAATAACGCTCAGTCCA

Downstream 100 bases:

>100_bases
ATCGATGGTAGTGTCGAACGTAGAGCTGTCGCCGAACTACTTCCGGATGAGGATGACCGCTCCGCAGGAATTGCTCGCTT
CGGCGCCGGGGCAGTTTCTC

Product: ribosomal protein S18 alanine N-acetyltransferase

Products: NA

Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRCDELKAVLEIESASFSRPWTEQHFQYEIDSPFGHPMVALADNGTLTGYLCLKLVLDEAEILDVAVGNSHRGKGIGRLL
VQWALDFSREHGASVLFLEVRAGNAEAIALYRSFGFRESGRRKNYYDNGEDAILMEMPVCRQSEENHAV

Sequences:

>Translated_149_residues
MRCDELKAVLEIESASFSRPWTEQHFQYEIDSPFGHPMVALADNGTLTGYLCLKLVLDEAEILDVAVGNSHRGKGIGRLL
VQWALDFSREHGASVLFLEVRAGNAEAIALYRSFGFRESGRRKNYYDNGEDAILMEMPVCRQSEENHAV
>Mature_149_residues
MRCDELKAVLEIESASFSRPWTEQHFQYEIDSPFGHPMVALADNGTLTGYLCLKLVLDEAEILDVAVGNSHRGKGIGRLL
VQWALDFSREHGASVLFLEVRAGNAEAIALYRSFGFRESGRRKNYYDNGEDAILMEMPVCRQSEENHAV

Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 (Potential) [H]

COG id: COG0456

COG function: function code R; Acetyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI2367381, Length=143, Percent_Identity=36.3636363636364, Blast_Score=98, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR006464 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: =2.3.1.128 [H]

Molecular weight: Translated: 16765; Mature: 16765

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCDELKAVLEIESASFSRPWTEQHFQYEIDSPFGHPMVALADNGTLTGYLCLKLVLDEA
CCHHHHHHHEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCC
EILDVAVGNSHRGKGIGRLLVQWALDFSREHGASVLFLEVRAGNAEAIALYRSFGFRESG
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCC
RRKNYYDNGEDAILMEMPVCRQSEENHAV
CCCCCCCCCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MRCDELKAVLEIESASFSRPWTEQHFQYEIDSPFGHPMVALADNGTLTGYLCLKLVLDEA
CCHHHHHHHEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCC
EILDVAVGNSHRGKGIGRLLVQWALDFSREHGASVLFLEVRAGNAEAIALYRSFGFRESG
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCC
RRKNYYDNGEDAILMEMPVCRQSEENHAV
CCCCCCCCCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]