| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is rimI [H]
Identifier: 197118780
GI number: 197118780
Start: 2780674
End: 2781123
Strand: Reverse
Name: rimI [H]
Synonym: Gbem_2401
Alternate gene names: 197118780
Gene position: 2781123-2780674 (Counterclockwise)
Preceding gene: 197118783
Following gene: 197118779
Centisome position: 60.26
GC content: 58.22
Gene sequence:
>450_bases ATGCGTTGCGATGAGCTCAAAGCGGTGCTCGAAATAGAGTCCGCATCGTTTTCGAGACCGTGGACCGAGCAGCACTTCCA GTACGAAATCGACTCGCCTTTCGGCCATCCAATGGTGGCCCTCGCCGATAACGGAACCCTCACTGGCTACCTCTGTCTCA AGCTTGTCCTGGACGAGGCCGAGATACTCGACGTCGCCGTCGGGAACTCTCATAGGGGGAAGGGGATCGGGAGACTCCTG GTGCAATGGGCGCTCGATTTCAGCCGCGAGCACGGGGCATCTGTATTGTTTCTGGAGGTGCGCGCCGGAAACGCGGAAGC CATCGCGCTCTACCGATCCTTCGGGTTCAGGGAATCGGGGCGCCGCAAGAACTATTACGACAATGGCGAAGACGCCATCT TGATGGAGATGCCGGTCTGCCGGCAGTCAGAGGAGAATCATGCAGTTTAA
Upstream 100 bases:
>100_bases CCTCGAAAAGTCAAAGCGAAAAAATTGTTTACTTCGCCTTGGCGTTTGCTTATGATGCCTTGCTGTGCCTGATCTCAGGG AGAAAATAACGCTCAGTCCA
Downstream 100 bases:
>100_bases ATCGATGGTAGTGTCGAACGTAGAGCTGTCGCCGAACTACTTCCGGATGAGGATGACCGCTCCGCAGGAATTGCTCGCTT CGGCGCCGGGGCAGTTTCTC
Product: ribosomal protein S18 alanine N-acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MRCDELKAVLEIESASFSRPWTEQHFQYEIDSPFGHPMVALADNGTLTGYLCLKLVLDEAEILDVAVGNSHRGKGIGRLL VQWALDFSREHGASVLFLEVRAGNAEAIALYRSFGFRESGRRKNYYDNGEDAILMEMPVCRQSEENHAV
Sequences:
>Translated_149_residues MRCDELKAVLEIESASFSRPWTEQHFQYEIDSPFGHPMVALADNGTLTGYLCLKLVLDEAEILDVAVGNSHRGKGIGRLL VQWALDFSREHGASVLFLEVRAGNAEAIALYRSFGFRESGRRKNYYDNGEDAILMEMPVCRQSEENHAV >Mature_149_residues MRCDELKAVLEIESASFSRPWTEQHFQYEIDSPFGHPMVALADNGTLTGYLCLKLVLDEAEILDVAVGNSHRGKGIGRLL VQWALDFSREHGASVLFLEVRAGNAEAIALYRSFGFRESGRRKNYYDNGEDAILMEMPVCRQSEENHAV
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 (Potential) [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=143, Percent_Identity=36.3636363636364, Blast_Score=98, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 16765; Mature: 16765
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCDELKAVLEIESASFSRPWTEQHFQYEIDSPFGHPMVALADNGTLTGYLCLKLVLDEA CCHHHHHHHEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCC EILDVAVGNSHRGKGIGRLLVQWALDFSREHGASVLFLEVRAGNAEAIALYRSFGFRESG CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCC RRKNYYDNGEDAILMEMPVCRQSEENHAV CCCCCCCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MRCDELKAVLEIESASFSRPWTEQHFQYEIDSPFGHPMVALADNGTLTGYLCLKLVLDEA CCHHHHHHHEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCC EILDVAVGNSHRGKGIGRLLVQWALDFSREHGASVLFLEVRAGNAEAIALYRSFGFRESG CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCC RRKNYYDNGEDAILMEMPVCRQSEENHAV CCCCCCCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377 [H]