| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118772
Identifier: 197118772
GI number: 197118772
Start: 2773033
End: 2773590
Strand: Direct
Name: 197118772
Synonym: Gbem_2393
Alternate gene names: NA
Gene position: 2773033-2773590 (Clockwise)
Preceding gene: 197118770
Following gene: 197118773
Centisome position: 60.09
GC content: 61.83
Gene sequence:
>558_bases TTGAACCCTAGAGCGTTACTTGAGAAATACTATGAGGACAACGACGCCGCCTTGGAGATCGTGTACAGACACAGTCGCAA TGTCGCGGACAAGGCGCTTGCCATAGCCGTCACGGCGGGACTGCCGCAGGCCGAGCTGGACTTCATCGAGGAGGCCGCGC TGCTCCACGACATCGGCGTCTCCCGCATCTATGCGCCAAAGCTCAACTGCTTCGGCAAGGCGCCCTACGTCTGGCACGGC GTCATCGGCCGAGAGATCCTCGATGCCGAGGGGCTTCCGCGACACGCCATGGTCTGCGAGCGGCACATAGGGGTCGGGCT CACCGCGGCGGACATCGTGGCGCAAAACCTGCGCCTGCCGGTACGGGAGATGTCGCCGGTCACAACCAGCGAGCGCATCG TAGCCTTGGCCGATCTCTTCTTCTCCAAAAAGGGAGGGGAGTTGGACCTTGAGAAGAGCACCCAGCAGGTGCGCTGCGAC CTGCTCAGGTTCGGCGCGGAAAAGGTGCAGATCTTCGAGAACTGGCTCAACGATTTCGGAGTCCGCGAATCAGCCTAG
Upstream 100 bases:
>100_bases TGACAGACGTCCCGGGGTGTGACAGCGACAACGGTTGCAATGAAAGGCCGAATCGGCATAATCTAGAACCTGGAAAGGTA AAATAGCAGTGGAGGAAGAT
Downstream 100 bases:
>100_bases CCCGCCCCCCGCGGGGCCGCGGCTGCTGATTTATGATATACTCGATGCCGCCTTACTCATTAGAAACGATGTAAAATGTT TCCAATCTGAGGCAGGGTCC
Product: metal-dependent phosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MNPRALLEKYYEDNDAALEIVYRHSRNVADKALAIAVTAGLPQAELDFIEEAALLHDIGVSRIYAPKLNCFGKAPYVWHG VIGREILDAEGLPRHAMVCERHIGVGLTAADIVAQNLRLPVREMSPVTTSERIVALADLFFSKKGGELDLEKSTQQVRCD LLRFGAEKVQIFENWLNDFGVRESA
Sequences:
>Translated_185_residues MNPRALLEKYYEDNDAALEIVYRHSRNVADKALAIAVTAGLPQAELDFIEEAALLHDIGVSRIYAPKLNCFGKAPYVWHG VIGREILDAEGLPRHAMVCERHIGVGLTAADIVAQNLRLPVREMSPVTTSERIVALADLFFSKKGGELDLEKSTQQVRCD LLRFGAEKVQIFENWLNDFGVRESA >Mature_185_residues MNPRALLEKYYEDNDAALEIVYRHSRNVADKALAIAVTAGLPQAELDFIEEAALLHDIGVSRIYAPKLNCFGKAPYVWHG VIGREILDAEGLPRHAMVCERHIGVGLTAADIVAQNLRLPVREMSPVTTSERIVALADLFFSKKGGELDLEKSTQQVRCD LLRFGAEKVQIFENWLNDFGVRESA
Specific function: Unknown
COG id: COG1418
COG function: function code R; Predicted HD superfamily hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004454 - InterPro: IPR003607 - InterPro: IPR006675 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20604; Mature: 20604
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPRALLEKYYEDNDAALEIVYRHSRNVADKALAIAVTAGLPQAELDFIEEAALLHDIGV CCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCH SRIYAPKLNCFGKAPYVWHGVIGREILDAEGLPRHAMVCERHIGVGLTAADIVAQNLRLP HHEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCC VREMSPVTTSERIVALADLFFSKKGGELDLEKSTQQVRCDLLRFGAEKVQIFENWLNDFG HHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC VRESA CCCCC >Mature Secondary Structure MNPRALLEKYYEDNDAALEIVYRHSRNVADKALAIAVTAGLPQAELDFIEEAALLHDIGV CCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCH SRIYAPKLNCFGKAPYVWHGVIGREILDAEGLPRHAMVCERHIGVGLTAADIVAQNLRLP HHEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCC VREMSPVTTSERIVALADLFFSKKGGELDLEKSTQQVRCDLLRFGAEKVQIFENWLNDFG HHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC VRESA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]