| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is purQ [H]
Identifier: 197118711
GI number: 197118711
Start: 2702365
End: 2703189
Strand: Reverse
Name: purQ [H]
Synonym: Gbem_2330
Alternate gene names: 197118711
Gene position: 2703189-2702365 (Counterclockwise)
Preceding gene: 197118712
Following gene: 197118710
Centisome position: 58.57
GC content: 62.67
Gene sequence:
>825_bases ATGACAAAGGCTAAAGCGCTAGTCATAACAGGCAACGGCACCAACTGCGAAATGGAGGCGGCCCACGCCTGCCGCCTGGG CGGCTTCGACGAGGCGCGCATCGCCCATATATCGGAACTTATGTCCGGCGAAGTGAGCCTGGACGATTACCACTTCCTCA ACTTGACCGGCGGCTTCCTCGACGGCGACGACCTGGGGAGCGCCAAAGCGCAGGCGAACCGGCTGCGCTACGCAGCGGTA GAAGGGAAGGGGGAGCTCCTGGTGGACCAGATCTCCCGCTTCATCGCCGACGGCAAGCTTATCTTGGGCGTCTGCAACGG GTTCCAGCTCCTGGTGAAGATGGGGATGCTCCCGGCTCTGGGGGGCAATTATCTGAATCAGACCGCGACGCTGACCTACA ACGCCAACGGCCGTTTCCAGGACCGCTGGTGCTACCTGAAGTGCGACGCGGCTTCCCCGTCGTTGTACACCCGCGGCATC GAGGGCGGGGTCTACCTTCCCGTGCGCCACGGCGAAGGTAAGTTCCTGGTGGACGACGCCAATACGCTCGAAGCGATCGA GACGAAGCACCTCACCTGCCTCAAGTACTCCGACAAGCACTACGCGGCACCGACCATGGAGTTCCCCGAGAACCCCAACG GCTCCGTCAACGCCATCGCCGGCATCTGCGACGAGACCGGCAGGGTCATGGGGCTCATGCCGCACCCCGAGGCGTTCGTG CACCGGACCCAGCACCCGCGCTGGACTAGAGAGGACCTGCCGGAAGAGGGCGAGGGGCTGATTTTCTTCAAGAACGCGGC TAAGTACGTGAAGGAAAACTTCTAG
Upstream 100 bases:
>100_bases GAAGGATCTGTAAAATCTTTATATGCAGAAAAAATGCGGGTTATGCCATAATGAACGGCGTTGCTTCCCGCTACCAATCT TTTCATAGAGGACTTATTTG
Downstream 100 bases:
>100_bases ATAAGTCTTCCCCCCACCGAAAGGGGACTGGCTCCGCCAGGTGCCTGTCTCCCTTCGGGGATGGACTGATCTCCCCACCG AGGGGAAGAATGGTGGACGA
Product: phosphoribosylformylglycinamidine synthase, PurQ domain-containing protein
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase I; FGAM synthase I [H]
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTKAKALVITGNGTNCEMEAAHACRLGGFDEARIAHISELMSGEVSLDDYHFLNLTGGFLDGDDLGSAKAQANRLRYAAV EGKGELLVDQISRFIADGKLILGVCNGFQLLVKMGMLPALGGNYLNQTATLTYNANGRFQDRWCYLKCDAASPSLYTRGI EGGVYLPVRHGEGKFLVDDANTLEAIETKHLTCLKYSDKHYAAPTMEFPENPNGSVNAIAGICDETGRVMGLMPHPEAFV HRTQHPRWTREDLPEEGEGLIFFKNAAKYVKENF
Sequences:
>Translated_274_residues MTKAKALVITGNGTNCEMEAAHACRLGGFDEARIAHISELMSGEVSLDDYHFLNLTGGFLDGDDLGSAKAQANRLRYAAV EGKGELLVDQISRFIADGKLILGVCNGFQLLVKMGMLPALGGNYLNQTATLTYNANGRFQDRWCYLKCDAASPSLYTRGI EGGVYLPVRHGEGKFLVDDANTLEAIETKHLTCLKYSDKHYAAPTMEFPENPNGSVNAIAGICDETGRVMGLMPHPEAFV HRTQHPRWTREDLPEEGEGLIFFKNAAKYVKENF >Mature_273_residues TKAKALVITGNGTNCEMEAAHACRLGGFDEARIAHISELMSGEVSLDDYHFLNLTGGFLDGDDLGSAKAQANRLRYAAVE GKGELLVDQISRFIADGKLILGVCNGFQLLVKMGMLPALGGNYLNQTATLTYNANGRFQDRWCYLKCDAASPSLYTRGIE GGVYLPVRHGEGKFLVDDANTLEAIETKHLTCLKYSDKHYAAPTMEFPENPNGSVNAIAGICDETGRVMGLMPHPEAFVH RTQHPRWTREDLPEEGEGLIFFKNAAKYVKENF
Specific function: Unknown
COG id: COG0047
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI31657129, Length=288, Percent_Identity=31.9444444444444, Blast_Score=114, Evalue=9e-26, Organism=Escherichia coli, GI48994899, Length=270, Percent_Identity=34.8148148148148, Blast_Score=138, Evalue=5e-34, Organism=Caenorhabditis elegans, GI17553022, Length=246, Percent_Identity=27.6422764227642, Blast_Score=92, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6321498, Length=281, Percent_Identity=30.9608540925267, Blast_Score=113, Evalue=4e-26, Organism=Drosophila melanogaster, GI24582111, Length=276, Percent_Identity=31.1594202898551, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24582109, Length=276, Percent_Identity=31.1594202898551, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI17137292, Length=276, Percent_Identity=31.1594202898551, Blast_Score=108, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR010075 - InterPro: IPR002818 [H]
Pfam domain/function: PF01965 DJ-1_PfpI [H]
EC number: =6.3.5.3 [H]
Molecular weight: Translated: 30068; Mature: 29937
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAKALVITGNGTNCEMEAAHACRLGGFDEARIAHISELMSGEVSLDDYHFLNLTGGFL CCCCEEEEEECCCCCCEEHHHHEHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCC DGDDLGSAKAQANRLRYAAVEGKGELLVDQISRFIADGKLILGVCNGFQLLVKMGMLPAL CCCCCCCHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCC GGNYLNQTATLTYNANGRFQDRWCYLKCDAASPSLYTRGIEGGVYLPVRHGEGKFLVDDA CCCCCCCEEEEEECCCCCEECEEEEEEECCCCCCCEEECCCCCEEEEEEECCCCEEEECC NTLEAIETKHLTCLKYSDKHYAAPTMEFPENPNGSVNAIAGICDETGRVMGLMPHPEAFV CHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCHHHH HRTQHPRWTREDLPEEGEGLIFFKNAAKYVKENF CCCCCCCCCHHCCCCCCCEEEEECCHHHHHHCCC >Mature Secondary Structure TKAKALVITGNGTNCEMEAAHACRLGGFDEARIAHISELMSGEVSLDDYHFLNLTGGFL CCCEEEEEECCCCCCEEHHHHEHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCC DGDDLGSAKAQANRLRYAAVEGKGELLVDQISRFIADGKLILGVCNGFQLLVKMGMLPAL CCCCCCCHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCC GGNYLNQTATLTYNANGRFQDRWCYLKCDAASPSLYTRGIEGGVYLPVRHGEGKFLVDDA CCCCCCCEEEEEECCCCCEECEEEEEEECCCCCCCEEECCCCCEEEEEEECCCCEEEECC NTLEAIETKHLTCLKYSDKHYAAPTMEFPENPNGSVNAIAGICDETGRVMGLMPHPEAFV CHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCHHHH HRTQHPRWTREDLPEEGEGLIFFKNAAKYVKENF CCCCCCCCCHHCCCCCCCEEEEECCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA