| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118708
Identifier: 197118708
GI number: 197118708
Start: 2699314
End: 2700003
Strand: Reverse
Name: 197118708
Synonym: Gbem_2327
Alternate gene names: NA
Gene position: 2700003-2699314 (Counterclockwise)
Preceding gene: 197118709
Following gene: 197118707
Centisome position: 58.5
GC content: 60.58
Gene sequence:
>690_bases ATGCAAGAAGTACTGACTAAATTTCGGATTTTGCTCGATAAGGTCGATGCCTGGTTCGCCCGCTCGATGGAGCTCTACCC GGAGAGCATCGCCTGCAAGAGCGGCTGCTCTGCCTGCTGCCGCTCCACCTTTGACATCACGCTCCTCGACGCCTATTACC TGAAGCTCGGGTTCGACCAGCTCCCCGAGGCCACCAGGGAGACGGTGCTGGTCAAGTGCCGCGACAGGCTCGCCCTGATG CGCGAGGCATGGCCCGAGTTCGACCACCCGTACCTCTTGAACTACCGCGACGAGGAGGAGTGGGAAGTTCTCATGCCCGA CGAGGATGAGACCCCCTGTGTGCTGCTGGGAGATGACGGCCGTTGCCTGGTCTACCAAACCCGCCCCATGACCTGCCGGC TGCACGGCATACCGCTGGTCGATACCGGCGGCGAGGTCATGCACGACGAGTGGTGCACCATGAACTTCACCGATGCCGAC CCGCTCCGGATGGACGGGCTCAGGGCCCCCTTCGACGAGATGCTGCACGAGGAGGTGGCGCTTTTCAGGGAGTTTACGAC GGCACTTGTAGGCGAAAGGCTTAGCGAAGTGGACACCTTGATACCGACCGCGCTTTTGATCGATTTCGAGAACTGCGACT GGCGCGGCGTGCTGAAAAGCGATACCGGACAACCTCAAGGATTGGATTAA
Upstream 100 bases:
>100_bases TCTTCAAACGGGGGAGAACCCGGTTTTCCCCTTTCTTTTAGCCTTTCCTTTGTGTCCTCCGTGTACCACTGTGACCTCTG TGGTAATGCTTAAAGGTTCT
Downstream 100 bases:
>100_bases CTAATGGCACTTCCCTCTACGATTTACCGCGCTTCAGTGCAGCTTTCCGATCTCGACCGCCAGATCTACGAGCAACTGCA GACCACCATCGCGCAACACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MQEVLTKFRILLDKVDAWFARSMELYPESIACKSGCSACCRSTFDITLLDAYYLKLGFDQLPEATRETVLVKCRDRLALM REAWPEFDHPYLLNYRDEEEWEVLMPDEDETPCVLLGDDGRCLVYQTRPMTCRLHGIPLVDTGGEVMHDEWCTMNFTDAD PLRMDGLRAPFDEMLHEEVALFREFTTALVGERLSEVDTLIPTALLIDFENCDWRGVLKSDTGQPQGLD
Sequences:
>Translated_229_residues MQEVLTKFRILLDKVDAWFARSMELYPESIACKSGCSACCRSTFDITLLDAYYLKLGFDQLPEATRETVLVKCRDRLALM REAWPEFDHPYLLNYRDEEEWEVLMPDEDETPCVLLGDDGRCLVYQTRPMTCRLHGIPLVDTGGEVMHDEWCTMNFTDAD PLRMDGLRAPFDEMLHEEVALFREFTTALVGERLSEVDTLIPTALLIDFENCDWRGVLKSDTGQPQGLD >Mature_229_residues MQEVLTKFRILLDKVDAWFARSMELYPESIACKSGCSACCRSTFDITLLDAYYLKLGFDQLPEATRETVLVKCRDRLALM REAWPEFDHPYLLNYRDEEEWEVLMPDEDETPCVLLGDDGRCLVYQTRPMTCRLHGIPLVDTGGEVMHDEWCTMNFTDAD PLRMDGLRAPFDEMLHEEVALFREFTTALVGERLSEVDTLIPTALLIDFENCDWRGVLKSDTGQPQGLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26376; Mature: 26376
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEVLTKFRILLDKVDAWFARSMELYPESIACKSGCSACCRSTFDITLLDAYYLKLGFDQ CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCHHH LPEATRETVLVKCRDRLALMREAWPEFDHPYLLNYRDEEEWEVLMPDEDETPCVLLGDDG CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEECCCCCCCCEEEECCCC RCLVYQTRPMTCRLHGIPLVDTGGEVMHDEWCTMNFTDADPLRMDGLRAPFDEMLHEEVA CEEEEECCCCEEEEECEEEECCCCCEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHH LFREFTTALVGERLSEVDTLIPTALLIDFENCDWRGVLKSDTGQPQGLD HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure MQEVLTKFRILLDKVDAWFARSMELYPESIACKSGCSACCRSTFDITLLDAYYLKLGFDQ CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCHHH LPEATRETVLVKCRDRLALMREAWPEFDHPYLLNYRDEEEWEVLMPDEDETPCVLLGDDG CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEECCCCCCCCEEEECCCC RCLVYQTRPMTCRLHGIPLVDTGGEVMHDEWCTMNFTDADPLRMDGLRAPFDEMLHEEVA CEEEEECCCCEEEEECEEEECCCCCEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHH LFREFTTALVGERLSEVDTLIPTALLIDFENCDWRGVLKSDTGQPQGLD HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA