Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is yaeQ [H]

Identifier: 197118707

GI number: 197118707

Start: 2698765

End: 2699310

Strand: Reverse

Name: yaeQ [H]

Synonym: Gbem_2326

Alternate gene names: 197118707

Gene position: 2699310-2698765 (Counterclockwise)

Preceding gene: 197118708

Following gene: 197118703

Centisome position: 58.49

GC content: 62.27

Gene sequence:

>546_bases
ATGGCACTTCCCTCTACGATTTACCGCGCTTCAGTGCAGCTTTCCGATCTCGACCGCCAGATCTACGAGCAACTGCAGAC
CACCATCGCGCAACACCCCTCCGAAACTGCGGAAAGGCTCTTGGCTCGCCTGCTGGCGTATGCCCTGTGCTTCCGCGAGG
AGCTCGTCTTCACCAAGGGGGTCGGCTCCGGCGACGAGCCGGATCTCTGGAGCAAGGGGCCCGATGGGAGGGTGCAACTG
TGGGTCGAGGTGGGGCTCCCCGATCCCGAAAAGCTCGCCAAGTCCTGCCGGCACGTCGAGCGCGCCATCCTCTTTGCCTT
CGGTTCCGGGCTGAACCGCTGGCTGCCGCAGCATCAGGTGAAGCTCGCCTCGATCCCCAACCTGACCGTTGTCGCTCTCG
ATTTCGGTTTCCTTTCACAACTTGCCACAGACCTGCAGCGCGTCATCTCCTGGTCCCTCACCGTCACCGAAGGGAACCTC
TATCTCACCGTAGGCGATCAGACTCTGGAGAGCGCTCTGCAGCAGGTAAGCGGTCCGCCGCTTTGA

Upstream 100 bases:

>100_bases
CACCTTGATACCGACCGCGCTTTTGATCGATTTCGAGAACTGCGACTGGCGCGGCGTGCTGAAAAGCGATACCGGACAAC
CTCAAGGATTGGATTAACTA

Downstream 100 bases:

>100_bases
ATCATGGTGGGGGTAGAGGAATTACCTTTCCCCTCTTTGTGGAGGAGTTGCTATTGTGCTCACCCCTTTGAGAAGGGGGG
ACGGGGGGGATTTAGCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MALPSTIYRASVQLSDLDRQIYEQLQTTIAQHPSETAERLLARLLAYALCFREELVFTKGVGSGDEPDLWSKGPDGRVQL
WVEVGLPDPEKLAKSCRHVERAILFAFGSGLNRWLPQHQVKLASIPNLTVVALDFGFLSQLATDLQRVISWSLTVTEGNL
YLTVGDQTLESALQQVSGPPL

Sequences:

>Translated_181_residues
MALPSTIYRASVQLSDLDRQIYEQLQTTIAQHPSETAERLLARLLAYALCFREELVFTKGVGSGDEPDLWSKGPDGRVQL
WVEVGLPDPEKLAKSCRHVERAILFAFGSGLNRWLPQHQVKLASIPNLTVVALDFGFLSQLATDLQRVISWSLTVTEGNL
YLTVGDQTLESALQQVSGPPL
>Mature_180_residues
ALPSTIYRASVQLSDLDRQIYEQLQTTIAQHPSETAERLLARLLAYALCFREELVFTKGVGSGDEPDLWSKGPDGRVQLW
VEVGLPDPEKLAKSCRHVERAILFAFGSGLNRWLPQHQVKLASIPNLTVVALDFGFLSQLATDLQRVISWSLTVTEGNLY
LTVGDQTLESALQQVSGPPL

Specific function: Unknown

COG id: COG4681

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786388, Length=180, Percent_Identity=35.5555555555556, Blast_Score=121, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009822 [H]

Pfam domain/function: PF07152 YaeQ [H]

EC number: NA

Molecular weight: Translated: 20045; Mature: 19914

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPSTIYRASVQLSDLDRQIYEQLQTTIAQHPSETAERLLARLLAYALCFREELVFTKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VGSGDEPDLWSKGPDGRVQLWVEVGLPDPEKLAKSCRHVERAILFAFGSGLNRWLPQHQV
CCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHH
KLASIPNLTVVALDFGFLSQLATDLQRVISWSLTVTEGNLYLTVGDQTLESALQQVSGPP
HHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHEEEECCEEEEEECCHHHHHHHHHHCCCC
L
C
>Mature Secondary Structure 
ALPSTIYRASVQLSDLDRQIYEQLQTTIAQHPSETAERLLARLLAYALCFREELVFTKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VGSGDEPDLWSKGPDGRVQLWVEVGLPDPEKLAKSCRHVERAILFAFGSGLNRWLPQHQV
CCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHH
KLASIPNLTVVALDFGFLSQLATDLQRVISWSLTVTEGNLYLTVGDQTLESALQQVSGPP
HHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHEEEECCEEEEEECCHHHHHHHHHHCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]