Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118708

Identifier: 197118708

GI number: 197118708

Start: 2699314

End: 2700003

Strand: Reverse

Name: 197118708

Synonym: Gbem_2327

Alternate gene names: NA

Gene position: 2700003-2699314 (Counterclockwise)

Preceding gene: 197118709

Following gene: 197118707

Centisome position: 58.5

GC content: 60.58

Gene sequence:

>690_bases
ATGCAAGAAGTACTGACTAAATTTCGGATTTTGCTCGATAAGGTCGATGCCTGGTTCGCCCGCTCGATGGAGCTCTACCC
GGAGAGCATCGCCTGCAAGAGCGGCTGCTCTGCCTGCTGCCGCTCCACCTTTGACATCACGCTCCTCGACGCCTATTACC
TGAAGCTCGGGTTCGACCAGCTCCCCGAGGCCACCAGGGAGACGGTGCTGGTCAAGTGCCGCGACAGGCTCGCCCTGATG
CGCGAGGCATGGCCCGAGTTCGACCACCCGTACCTCTTGAACTACCGCGACGAGGAGGAGTGGGAAGTTCTCATGCCCGA
CGAGGATGAGACCCCCTGTGTGCTGCTGGGAGATGACGGCCGTTGCCTGGTCTACCAAACCCGCCCCATGACCTGCCGGC
TGCACGGCATACCGCTGGTCGATACCGGCGGCGAGGTCATGCACGACGAGTGGTGCACCATGAACTTCACCGATGCCGAC
CCGCTCCGGATGGACGGGCTCAGGGCCCCCTTCGACGAGATGCTGCACGAGGAGGTGGCGCTTTTCAGGGAGTTTACGAC
GGCACTTGTAGGCGAAAGGCTTAGCGAAGTGGACACCTTGATACCGACCGCGCTTTTGATCGATTTCGAGAACTGCGACT
GGCGCGGCGTGCTGAAAAGCGATACCGGACAACCTCAAGGATTGGATTAA

Upstream 100 bases:

>100_bases
TCTTCAAACGGGGGAGAACCCGGTTTTCCCCTTTCTTTTAGCCTTTCCTTTGTGTCCTCCGTGTACCACTGTGACCTCTG
TGGTAATGCTTAAAGGTTCT

Downstream 100 bases:

>100_bases
CTAATGGCACTTCCCTCTACGATTTACCGCGCTTCAGTGCAGCTTTCCGATCTCGACCGCCAGATCTACGAGCAACTGCA
GACCACCATCGCGCAACACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MQEVLTKFRILLDKVDAWFARSMELYPESIACKSGCSACCRSTFDITLLDAYYLKLGFDQLPEATRETVLVKCRDRLALM
REAWPEFDHPYLLNYRDEEEWEVLMPDEDETPCVLLGDDGRCLVYQTRPMTCRLHGIPLVDTGGEVMHDEWCTMNFTDAD
PLRMDGLRAPFDEMLHEEVALFREFTTALVGERLSEVDTLIPTALLIDFENCDWRGVLKSDTGQPQGLD

Sequences:

>Translated_229_residues
MQEVLTKFRILLDKVDAWFARSMELYPESIACKSGCSACCRSTFDITLLDAYYLKLGFDQLPEATRETVLVKCRDRLALM
REAWPEFDHPYLLNYRDEEEWEVLMPDEDETPCVLLGDDGRCLVYQTRPMTCRLHGIPLVDTGGEVMHDEWCTMNFTDAD
PLRMDGLRAPFDEMLHEEVALFREFTTALVGERLSEVDTLIPTALLIDFENCDWRGVLKSDTGQPQGLD
>Mature_229_residues
MQEVLTKFRILLDKVDAWFARSMELYPESIACKSGCSACCRSTFDITLLDAYYLKLGFDQLPEATRETVLVKCRDRLALM
REAWPEFDHPYLLNYRDEEEWEVLMPDEDETPCVLLGDDGRCLVYQTRPMTCRLHGIPLVDTGGEVMHDEWCTMNFTDAD
PLRMDGLRAPFDEMLHEEVALFREFTTALVGERLSEVDTLIPTALLIDFENCDWRGVLKSDTGQPQGLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26376; Mature: 26376

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEVLTKFRILLDKVDAWFARSMELYPESIACKSGCSACCRSTFDITLLDAYYLKLGFDQ
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCHHH
LPEATRETVLVKCRDRLALMREAWPEFDHPYLLNYRDEEEWEVLMPDEDETPCVLLGDDG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEECCCCCCCCEEEECCCC
RCLVYQTRPMTCRLHGIPLVDTGGEVMHDEWCTMNFTDADPLRMDGLRAPFDEMLHEEVA
CEEEEECCCCEEEEECEEEECCCCCEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHH
LFREFTTALVGERLSEVDTLIPTALLIDFENCDWRGVLKSDTGQPQGLD
HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MQEVLTKFRILLDKVDAWFARSMELYPESIACKSGCSACCRSTFDITLLDAYYLKLGFDQ
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCHHH
LPEATRETVLVKCRDRLALMREAWPEFDHPYLLNYRDEEEWEVLMPDEDETPCVLLGDDG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEECCCCCCCCEEEECCCC
RCLVYQTRPMTCRLHGIPLVDTGGEVMHDEWCTMNFTDADPLRMDGLRAPFDEMLHEEVA
CEEEEECCCCEEEEECEEEECCCCCEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHH
LFREFTTALVGERLSEVDTLIPTALLIDFENCDWRGVLKSDTGQPQGLD
HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA