| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is 197118693
Identifier: 197118693
GI number: 197118693
Start: 2685105
End: 2685920
Strand: Reverse
Name: 197118693
Synonym: Gbem_2312
Alternate gene names: NA
Gene position: 2685920-2685105 (Counterclockwise)
Preceding gene: 197118694
Following gene: 197118691
Centisome position: 58.2
GC content: 57.35
Gene sequence:
>816_bases ATGGCAATCATCACAATTTCCAGAGAGATGGGTACCGGCGCCTACGCCATTGCCAAGGAATTGGCAAAGAAGCTCAAGTA CACGCTCGTCGATCGCCTGAAGATCGAAGAGCTTGCACCGGCATACGGCCTGACGCCCGAGATCCTGGAGAGGGTCGACG AGAAGCCGCCTTCATACCGGACCGCAGAGGACCGGTTGCAGGCAGCGCATCTCGCCACCATGGAGCTGATCCTCCTGGAC AACGCCAGGAAGGGAAACGTGATTCTCTACGGAAGGGGGGCTCAGGACCTGATCAAGGGCGTCACCAACGTGCTCAAGGT CCGATTTATTGCGCCTTTTGAAGACCGCGTGGAAAAATTCGCGGAAAGGGAGTGGATCGATCCCGATCTGGCCCGGGAGC TGATTAGAAAGAGCGACCACCAGTTGGGAGGGTTCATCCATTTCTACTTCGACCGCGACTGGAATGACCCGATGGCCTAC GACCTGATCCTCAACACCAGCAAGTCCAGCCATAGCGCCATGATCGAGTCTGTCATAGCAGCCTCCAAGGATCCCCGTCT CAAAGCAGGCGAGGGTGAGTCCATGGCGCTTCTTGACGACTGCATCCTTGCCAAGCGCGTCGAAGCAGAAATTCTCAAGT CGTCCCTTGAGCGCAGGCTGCGCATCACTGCCAAAGACGGCGTCGTCACGCTTTCCGGTCACGTACAGGCAGAAGGGCAG ATCGAAGAGGCCGTTCGCATAGCCGGTTCCGTCTCCGGTGTGACCGACGTGGATTGCGACTTGGATGTGGTCAGCTACAA ACCGGTGAAGGACTAA
Upstream 100 bases:
>100_bases CAGGCCTCGCATTCCTATCTTTCCGCGCCAAAATCCCTTGTATACAGAGTGATTCGCATGATATGATGCCCTGGTTTCTC ATTAGCAATAGGAGGCATGC
Downstream 100 bases:
>100_bases AGGCAGGGGAGAGGCAGGGACTAGGGGCTAGGGGCTGATGGACCCTGTGGACCCTGTGGACTCCATGGACAATATTAAAA CTACAAAGGGGCTGGTGGCG
Product: cytidylate kinase domain phospholipid-binding protein
Products: NA
Alternate protein names: Transport-Associated Protein; Response Regulator Receiver Protein; Cytoplasmic Protein; Cytidylate Kinase Putative; Transport-Associated Domain Protein; Bon Domain-Containing Protein
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MAIITISREMGTGAYAIAKELAKKLKYTLVDRLKIEELAPAYGLTPEILERVDEKPPSYRTAEDRLQAAHLATMELILLD NARKGNVILYGRGAQDLIKGVTNVLKVRFIAPFEDRVEKFAEREWIDPDLARELIRKSDHQLGGFIHFYFDRDWNDPMAY DLILNTSKSSHSAMIESVIAASKDPRLKAGEGESMALLDDCILAKRVEAEILKSSLERRLRITAKDGVVTLSGHVQAEGQ IEEAVRIAGSVSGVTDVDCDLDVVSYKPVKD
Sequences:
>Translated_271_residues MAIITISREMGTGAYAIAKELAKKLKYTLVDRLKIEELAPAYGLTPEILERVDEKPPSYRTAEDRLQAAHLATMELILLD NARKGNVILYGRGAQDLIKGVTNVLKVRFIAPFEDRVEKFAEREWIDPDLARELIRKSDHQLGGFIHFYFDRDWNDPMAY DLILNTSKSSHSAMIESVIAASKDPRLKAGEGESMALLDDCILAKRVEAEILKSSLERRLRITAKDGVVTLSGHVQAEGQ IEEAVRIAGSVSGVTDVDCDLDVVSYKPVKD >Mature_270_residues AIITISREMGTGAYAIAKELAKKLKYTLVDRLKIEELAPAYGLTPEILERVDEKPPSYRTAEDRLQAAHLATMELILLDN ARKGNVILYGRGAQDLIKGVTNVLKVRFIAPFEDRVEKFAEREWIDPDLARELIRKSDHQLGGFIHFYFDRDWNDPMAYD LILNTSKSSHSAMIESVIAASKDPRLKAGEGESMALLDDCILAKRVEAEILKSSLERRLRITAKDGVVTLSGHVQAEGQI EEAVRIAGSVSGVTDVDCDLDVVSYKPVKD
Specific function: Unknown
COG id: COG1102
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30198; Mature: 30067
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIITISREMGTGAYAIAKELAKKLKYTLVDRLKIEELAPAYGLTPEILERVDEKPPSYR CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC TAEDRLQAAHLATMELILLDNARKGNVILYGRGAQDLIKGVTNVLKVRFIAPFEDRVEKF CHHHHHHHHHHHHEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHEECCHHHHHHHH AEREWIDPDLARELIRKSDHQLGGFIHFYFDRDWNDPMAYDLILNTSKSSHSAMIESVIA HHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHH ASKDPRLKAGEGESMALLDDCILAKRVEAEILKSSLERRLRITAKDGVVTLSGHVQAEGQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCEECCCH IEEAVRIAGSVSGVTDVDCDLDVVSYKPVKD HHHHHHHHHCCCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure AIITISREMGTGAYAIAKELAKKLKYTLVDRLKIEELAPAYGLTPEILERVDEKPPSYR EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC TAEDRLQAAHLATMELILLDNARKGNVILYGRGAQDLIKGVTNVLKVRFIAPFEDRVEKF CHHHHHHHHHHHHEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHEECCHHHHHHHH AEREWIDPDLARELIRKSDHQLGGFIHFYFDRDWNDPMAYDLILNTSKSSHSAMIESVIA HHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHH ASKDPRLKAGEGESMALLDDCILAKRVEAEILKSSLERRLRITAKDGVVTLSGHVQAEGQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCEECCCH IEEAVRIAGSVSGVTDVDCDLDVVSYKPVKD HHHHHHHHHCCCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA