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The map label for this gene is rbr [H]

Identifier: 197118694

GI number: 197118694

Start: 2686062

End: 2686598

Strand: Reverse

Name: rbr [H]

Synonym: Gbem_2313

Alternate gene names: 197118694

Gene position: 2686598-2686062 (Counterclockwise)

Preceding gene: 197118695

Following gene: 197118693

Centisome position: 58.21

GC content: 58.47

Gene sequence:

>537_bases
ATGACTGAACTTAAAGGAAGCAAAACGGAAAAGAACCTGCTGGAGGCTTTTGCCGGCGAGTCGCAGGCGCGCAACAAGTA
CACCTATTACGCATCGGTCGCTAAGAAGGAAGGGTACGAGCAGATAGCGTCGCTCTTTCTGGAGACGGCCGAAAACGAGA
AGGAGCACGCGAAACTCCATCTGAAAGCGCTCGGGGGAATCGGGGATACCATCACCAACCTGAAAGCCGCAGCCGCAGGG
GAGTACGCCGAGTGGGTGGACATGTACCCCCGGATGGCCAAGGAGGCCAAGGAAGAAGGGTTCACCGCCATCGCCGCCGT
GTTCGAGGGCATCGCTAACATCGAGAAGGCGCACCAGGAGCGTTACAAGGCATTGCTTGCCTCCATAGAGGACGGGACCG
TCTTCAAGGAAGAGGAGCCTACGGTCTGGAAGTGCCGCAACTGCGGTCACCTCCACGAGGGGGTCGAGCCGCCGCAGGGT
TGTCCTGTATGTCATCACCCGAAGGCCTACTTCGAGCGCAGCGCTGAAAACTACTAG

Upstream 100 bases:

>100_bases
CTCCCGATCTGCTCGCCAAATTGAGCGAACTTCAGGGGGTCAAACGGGTAAGTGTCGATTGAGCGAATTAAAACTGGCAA
CAGGAAAGGAGTTACTGAGC

Downstream 100 bases:

>100_bases
AGTTCACCAGGGGGGGATCATTCCCCCCTGCATCTTTTACCCAGGCCTCGCATTCCTATCTTTCCGCGCCAAAATCCCTT
GTATACAGAGTGATTCGCAT

Product: rubrerythrin

Products: NA

Alternate protein names: RR [H]

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTELKGSKTEKNLLEAFAGESQARNKYTYYASVAKKEGYEQIASLFLETAENEKEHAKLHLKALGGIGDTITNLKAAAAG
EYAEWVDMYPRMAKEAKEEGFTAIAAVFEGIANIEKAHQERYKALLASIEDGTVFKEEEPTVWKCRNCGHLHEGVEPPQG
CPVCHHPKAYFERSAENY

Sequences:

>Translated_178_residues
MTELKGSKTEKNLLEAFAGESQARNKYTYYASVAKKEGYEQIASLFLETAENEKEHAKLHLKALGGIGDTITNLKAAAAG
EYAEWVDMYPRMAKEAKEEGFTAIAAVFEGIANIEKAHQERYKALLASIEDGTVFKEEEPTVWKCRNCGHLHEGVEPPQG
CPVCHHPKAYFERSAENY
>Mature_177_residues
TELKGSKTEKNLLEAFAGESQARNKYTYYASVAKKEGYEQIASLFLETAENEKEHAKLHLKALGGIGDTITNLKAAAAGE
YAEWVDMYPRMAKEAKEEGFTAIAAVFEGIANIEKAHQERYKALLASIEDGTVFKEEEPTVWKCRNCGHLHEGVEPPQGC
PVCHHPKAYFERSAENY

Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 19859; Mature: 19728

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELKGSKTEKNLLEAFAGESQARNKYTYYASVAKKEGYEQIASLFLETAENEKEHAKLH
CCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHH
LKALGGIGDTITNLKAAAAGEYAEWVDMYPRMAKEAKEEGFTAIAAVFEGIANIEKAHQE
HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYKALLASIEDGTVFKEEEPTVWKCRNCGHLHEGVEPPQGCPVCHHPKAYFERSAENY
HHHHHHHHCCCCCEECCCCCCEEHHCCCCCHHCCCCCCCCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure 
TELKGSKTEKNLLEAFAGESQARNKYTYYASVAKKEGYEQIASLFLETAENEKEHAKLH
CCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHH
LKALGGIGDTITNLKAAAAGEYAEWVDMYPRMAKEAKEEGFTAIAAVFEGIANIEKAHQE
HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYKALLASIEDGTVFKEEEPTVWKCRNCGHLHEGVEPPQGCPVCHHPKAYFERSAENY
HHHHHHHHCCCCCEECCCCCCEEHHCCCCCHHCCCCCCCCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11972784; 12949112 [H]