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The map label for this gene is 197118676

Identifier: 197118676

GI number: 197118676

Start: 2666956

End: 2667756

Strand: Reverse

Name: 197118676

Synonym: Gbem_2295

Alternate gene names: NA

Gene position: 2667756-2666956 (Counterclockwise)

Preceding gene: 197118677

Following gene: 197118675

Centisome position: 57.8

GC content: 64.79

Gene sequence:

>801_bases
ATGATACGTCAGCCCGCAGTAGCAGGTAAGTTCTACAGCGCCGACCCGGAGCAGCTCCGCGAGGAGCTTTCCCGGATGAT
TCCGCGGGAGGAACCCGCCAAGGCGATCGGGGTGGTCGCCCCCCATGCAGGCTACGTCTACTCCGGCGGCGCCGCCGGTA
AGGTCTACGCTGCTGTCGAAGTCCCCGATGCTGTCATCGTGCTCGGCCCCAATCACACCGGCATGGGCGCTGCCGCAGCG
CTCGCGCCGTCCGGGGAGTGGCTGACCCCGCTCGGCCCGGTCCCCGTCAACGACCGCCTTTCCCAGCTCATCATGAAATA
TGCCCCCCTGGTCCGCGAGGACAGCGCGGCCCACCGCTTCGAGCATTCGCTGGAGGTGCAGGTGCCTTTCCTGCAATACC
GAAATCCCCAAGTTTCCATCGCAGCACTTTGCCTTTCCCTCCCCGACTTCGACTCCATCTCCCGCGTCGGGACAGGTATC
GCCCACGCCATAGCCGAGTACGGCTCGGAGGTGCTGATCGTGGCCAGTTCCGATATGACCCACTATCAGTCCGCTGCCGA
GGCCAAGGCGAAGGACGAGCTGGCCCTGGAACGGCTGGCGAACATGGACCCTGAAGGGCTCCTGCGGGTTTGCCGCGACA
AGGACATCTCCATGTGCGGCGTCATTCCCGCGACCGCGATGCTCGTCGCCGCCAAGACGCTGGGGGCTACCTCCAGCAGG
CTTATCTGCTACACCAACAGCGGCGAGGTGAACGGCGACCTCAAGGCAGTAGTGGCGTACGCCGCAATCACGGTCTCTTG
A

Upstream 100 bases:

>100_bases
ACCAGCCCGCCCTCCCGTTGGGCTCGGTTGAAGGGTAGCCTTTGCTGCGTTAAAATATCGCCTGGCGCGCGGTAATGAGA
ACGCCGCCCTAGGAGGCCCC

Downstream 100 bases:

>100_bases
TGGATGTAATCACCACGCATCTAAACGCCGACTTCGACTGTATCGGCTCCATGGTTGCCGCGAAGAAGCTTTACCCCGAG
GCGCTCCTGGTCTTCTCAGG

Product: MEMO-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MIRQPAVAGKFYSADPEQLREELSRMIPREEPAKAIGVVAPHAGYVYSGGAAGKVYAAVEVPDAVIVLGPNHTGMGAAAA
LAPSGEWLTPLGPVPVNDRLSQLIMKYAPLVREDSAAHRFEHSLEVQVPFLQYRNPQVSIAALCLSLPDFDSISRVGTGI
AHAIAEYGSEVLIVASSDMTHYQSAAEAKAKDELALERLANMDPEGLLRVCRDKDISMCGVIPATAMLVAAKTLGATSSR
LICYTNSGEVNGDLKAVVAYAAITVS

Sequences:

>Translated_266_residues
MIRQPAVAGKFYSADPEQLREELSRMIPREEPAKAIGVVAPHAGYVYSGGAAGKVYAAVEVPDAVIVLGPNHTGMGAAAA
LAPSGEWLTPLGPVPVNDRLSQLIMKYAPLVREDSAAHRFEHSLEVQVPFLQYRNPQVSIAALCLSLPDFDSISRVGTGI
AHAIAEYGSEVLIVASSDMTHYQSAAEAKAKDELALERLANMDPEGLLRVCRDKDISMCGVIPATAMLVAAKTLGATSSR
LICYTNSGEVNGDLKAVVAYAAITVS
>Mature_266_residues
MIRQPAVAGKFYSADPEQLREELSRMIPREEPAKAIGVVAPHAGYVYSGGAAGKVYAAVEVPDAVIVLGPNHTGMGAAAA
LAPSGEWLTPLGPVPVNDRLSQLIMKYAPLVREDSAAHRFEHSLEVQVPFLQYRNPQVSIAALCLSLPDFDSISRVGTGI
AHAIAEYGSEVLIVASSDMTHYQSAAEAKAKDELALERLANMDPEGLLRVCRDKDISMCGVIPATAMLVAAKTLGATSSR
LICYTNSGEVNGDLKAVVAYAAITVS

Specific function: Unknown

COG id: COG1355

COG function: function code R; Predicted dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0103 family [H]

Homologues:

Organism=Homo sapiens, GI7705720, Length=288, Percent_Identity=23.2638888888889, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI25146594, Length=276, Percent_Identity=25, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI32566861, Length=276, Percent_Identity=25, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21357419, Length=290, Percent_Identity=24.1379310344828, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020619
- InterPro:   IPR002737 [H]

Pfam domain/function: PF01875 Memo [H]

EC number: NA

Molecular weight: Translated: 28131; Mature: 28131

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRQPAVAGKFYSADPEQLREELSRMIPREEPAKAIGVVAPHAGYVYSGGAAGKVYAAVE
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHEEEECCCCCEEECCCCCCEEEEEEE
VPDAVIVLGPNHTGMGAAAALAPSGEWLTPLGPVPVNDRLSQLIMKYAPLVREDSAAHRF
CCCEEEEECCCCCCCCHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCCHHHHH
EHSLEVQVPFLQYRNPQVSIAALCLSLPDFDSISRVGTGIAHAIAEYGSEVLIVASSDMT
CCCEEEEECHHHCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCH
HYQSAAEAKAKDELALERLANMDPEGLLRVCRDKDISMCGVIPATAMLVAAKTLGATSSR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCE
LICYTNSGEVNGDLKAVVAYAAITVS
EEEEECCCCCCCHHHHEEEEEEEECC
>Mature Secondary Structure
MIRQPAVAGKFYSADPEQLREELSRMIPREEPAKAIGVVAPHAGYVYSGGAAGKVYAAVE
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHEEEECCCCCEEECCCCCCEEEEEEE
VPDAVIVLGPNHTGMGAAAALAPSGEWLTPLGPVPVNDRLSQLIMKYAPLVREDSAAHRF
CCCEEEEECCCCCCCCHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCCHHHHH
EHSLEVQVPFLQYRNPQVSIAALCLSLPDFDSISRVGTGIAHAIAEYGSEVLIVASSDMT
CCCEEEEECHHHCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCH
HYQSAAEAKAKDELALERLANMDPEGLLRVCRDKDISMCGVIPATAMLVAAKTLGATSSR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCE
LICYTNSGEVNGDLKAVVAYAAITVS
EEEEECCCCCCCHHHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA