| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118673
Identifier: 197118673
GI number: 197118673
Start: 2662430
End: 2663470
Strand: Reverse
Name: 197118673
Synonym: Gbem_2292
Alternate gene names: NA
Gene position: 2663470-2662430 (Counterclockwise)
Preceding gene: 197118674
Following gene: 197118672
Centisome position: 57.71
GC content: 62.15
Gene sequence:
>1041_bases ATGGAAACCAGTACGAAGCCGCCCGACCTTTTGGCCTATACCGACTCTCTGCTGACCTGGGTCAGCGGCCGGGGGCGCAT CCTGATAGTGGTGCACGACAACCCCGACCCCGATTCGCTCGCCTCAGCCATGGCGTTGCGGCACTTTTTTGCGGTGAAGC TGAACCGCGAGGCGGTGATCGCCTTCTCCGGCATGATCGGCAGAAGCGAAAACCTCGCCATGGCGAAACTGCTCCAGATT CCGCTCACCCCGCTGCCCCTCATCGACCTCAAATGTTTCCAGGTTGTCTGCCTGCTGGACACGCAACCCGGCACCGGGAA CAACTCCCTCCCCGCAGGGATGCGCACCGACATCGTCATCGACCACCATCCCATGCGTGAATCCAGTGCCGCCTGCCGGT GGGTCGATATCCGCCCCGATTACGGGACCACGGCGACCATTCTTTTCGAGTACCTGAAGGTGCAGGGGGTGTCGATCGGG ACCAAGATGGCCACAGCGCTCTTCTACGCCATCAAATCCGAGACGCAGGACCTGGGGCGTGAGGCGAGAAGGGCGGACCG GGACGCCTACCTGGATCTTTTCCCGCTGGCCAACAAGACCCTTTTAAACAGCATCACCCGCCCAAGCCTTCCCCGCGAAT ACTTCATCTCGCTGCATAACGCGCTGGAGCACGCGGCGCTCTACGGCAAGGTGCTGGTGGCGTCGCTCAAGGGGATTCAG TTCCCCGAGGTGGTGGCCGAGCTAGCCGACCTCCTGGTGCGGCTGGAAGGGACCGATACGGTGCTTTGCCTCGGGCACTA CAGCGCCGAACTCGTTCTCTCCATCAGGACCTCGAACGAGGAGATAAACGCCGGCGAATTGATCCGCAAGCTGGTCGCCG GTATCGGCGCTGCAGGCGGCCACGGCATGATGGCCGGCGGCAAGATCGACTTGAGCGACAACTCGGAGCAGGCCATTCAT GAGCTGGAGAACCTGCTCACCGAACGGCTGCTGGCCGAGCTGAAGATTTCCGATCTGAAACCGGTGCCGCTGGTCCCCTG A
Upstream 100 bases:
>100_bases GCCGCTTTTGCCACCGTCTCAACCAAGCCGTTTTCTTGCCTTAGCGCCGCCCCTGGTATAGACTTCACAAGTTTTTGAGC TTAGAAAACGGGGGTGCCAT
Downstream 100 bases:
>100_bases AAGGTTCATGAAAGCGGTTGCCAAACGACCCTCAAAATGCTAGTAGATACCCTATGCCCGTCTTCCTTGATAACGCCGCG ACCTCATTCCCTAAACCGGA
Product: DHH domain phosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues METSTKPPDLLAYTDSLLTWVSGRGRILIVVHDNPDPDSLASAMALRHFFAVKLNREAVIAFSGMIGRSENLAMAKLLQI PLTPLPLIDLKCFQVVCLLDTQPGTGNNSLPAGMRTDIVIDHHPMRESSAACRWVDIRPDYGTTATILFEYLKVQGVSIG TKMATALFYAIKSETQDLGREARRADRDAYLDLFPLANKTLLNSITRPSLPREYFISLHNALEHAALYGKVLVASLKGIQ FPEVVAELADLLVRLEGTDTVLCLGHYSAELVLSIRTSNEEINAGELIRKLVAGIGAAGGHGMMAGGKIDLSDNSEQAIH ELENLLTERLLAELKISDLKPVPLVP
Sequences:
>Translated_346_residues METSTKPPDLLAYTDSLLTWVSGRGRILIVVHDNPDPDSLASAMALRHFFAVKLNREAVIAFSGMIGRSENLAMAKLLQI PLTPLPLIDLKCFQVVCLLDTQPGTGNNSLPAGMRTDIVIDHHPMRESSAACRWVDIRPDYGTTATILFEYLKVQGVSIG TKMATALFYAIKSETQDLGREARRADRDAYLDLFPLANKTLLNSITRPSLPREYFISLHNALEHAALYGKVLVASLKGIQ FPEVVAELADLLVRLEGTDTVLCLGHYSAELVLSIRTSNEEINAGELIRKLVAGIGAAGGHGMMAGGKIDLSDNSEQAIH ELENLLTERLLAELKISDLKPVPLVP >Mature_346_residues METSTKPPDLLAYTDSLLTWVSGRGRILIVVHDNPDPDSLASAMALRHFFAVKLNREAVIAFSGMIGRSENLAMAKLLQI PLTPLPLIDLKCFQVVCLLDTQPGTGNNSLPAGMRTDIVIDHHPMRESSAACRWVDIRPDYGTTATILFEYLKVQGVSIG TKMATALFYAIKSETQDLGREARRADRDAYLDLFPLANKTLLNSITRPSLPREYFISLHNALEHAALYGKVLVASLKGIQ FPEVVAELADLLVRLEGTDTVLCLGHYSAELVLSIRTSNEEINAGELIRKLVAGIGAAGGHGMMAGGKIDLSDNSEQAIH ELENLLTERLLAELKISDLKPVPLVP
Specific function: Unknown
COG id: COG0618
COG function: function code R; Exopolyphosphatase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR003156 - InterPro: IPR001667 - InterPro: IPR003148 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 37760; Mature: 37760
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METSTKPPDLLAYTDSLLTWVSGRGRILIVVHDNPDPDSLASAMALRHFFAVKLNREAVI CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHEEECCCEEE AFSGMIGRSENLAMAKLLQIPLTPLPLIDLKCFQVVCLLDTQPGTGNNSLPAGMRTDIVI EEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHEEEEEEEECCCCCCCCCCCCCCCCCEEE DHHPMRESSAACRWVDIRPDYGTTATILFEYLKVQGVSIGTKMATALFYAIKSETQDLGR ECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH EARRADRDAYLDLFPLANKTLLNSITRPSLPREYFISLHNALEHAALYGKVLVASLKGIQ HHHHCCCHHEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FPEVVAELADLLVRLEGTDTVLCLGHYSAELVLSIRTSNEEINAGELIRKLVAGIGAAGG CHHHHHHHHHHHEEECCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCC HGMMAGGKIDLSDNSEQAIHELENLLTERLLAELKISDLKPVPLVP CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure METSTKPPDLLAYTDSLLTWVSGRGRILIVVHDNPDPDSLASAMALRHFFAVKLNREAVI CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHEEECCCEEE AFSGMIGRSENLAMAKLLQIPLTPLPLIDLKCFQVVCLLDTQPGTGNNSLPAGMRTDIVI EEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHEEEEEEEECCCCCCCCCCCCCCCCCEEE DHHPMRESSAACRWVDIRPDYGTTATILFEYLKVQGVSIGTKMATALFYAIKSETQDLGR ECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH EARRADRDAYLDLFPLANKTLLNSITRPSLPREYFISLHNALEHAALYGKVLVASLKGIQ HHHHCCCHHEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FPEVVAELADLLVRLEGTDTVLCLGHYSAELVLSIRTSNEEINAGELIRKLVAGIGAAGG CHHHHHHHHHHHEEECCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCC HGMMAGGKIDLSDNSEQAIHELENLLTERLLAELKISDLKPVPLVP CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]