| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118636
Identifier: 197118636
GI number: 197118636
Start: 2624338
End: 2624748
Strand: Reverse
Name: 197118636
Synonym: Gbem_2255
Alternate gene names: NA
Gene position: 2624748-2624338 (Counterclockwise)
Preceding gene: 308535294
Following gene: 197118634
Centisome position: 56.87
GC content: 43.07
Gene sequence:
>411_bases ATGCTGCTGATCAGTTGGCATGCTGATTTTTCTGTTGGAATTCCGATAATCGATGAACATAATCAGCAGTTTATTAAGCT GATTAACATGGTCTCTGAACAATTCGGCCAGGGGTTTTGTACTGAAAGCCGCACTGTCCTTTTAAAGACTGTTGTTTCCC TGAGTCGCTTCTATTTTGAATATGAAGAGCGTTGGATGGCTAAAGTCGCTTTTTCAGAATTGTCCGGGCATAAAAGGGAC CATGACGCATTCATGGCGCGTATCCTCCCGTGTGTTGAAGGTGATGCAGGTGACGATGCTCAGTTACTGCAGTTCTTGAA CGACTGGAGCCTTGAGCACTTCAACTTGCACAACCCCAAGGTTAAACGATATGTCTTAGAGTATAGTGAGCGGCTAAATA AAATTAATTAA
Upstream 100 bases:
>100_bases GTGATGGAAGGCCTAGTGGGTCTCACAGAGGCAGATGGGGCGCGGATGTTCATATTTTGGGCTCCCGCTTGTTTGTCTGA CGGCCCGGAAAGGGTGACCT
Downstream 100 bases:
>100_bases TTCGGGCCGGGCGCAGGGATTTCGACTGTCACAACAGTCTTTTTGTCGGGTCCTGAGGAGATGCTCAGGTTCCCTTTGAG GAAGGCTACCCTTTGCTGAA
Product: hemerythrin family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MLLISWHADFSVGIPIIDEHNQQFIKLINMVSEQFGQGFCTESRTVLLKTVVSLSRFYFEYEERWMAKVAFSELSGHKRD HDAFMARILPCVEGDAGDDAQLLQFLNDWSLEHFNLHNPKVKRYVLEYSERLNKIN
Sequences:
>Translated_136_residues MLLISWHADFSVGIPIIDEHNQQFIKLINMVSEQFGQGFCTESRTVLLKTVVSLSRFYFEYEERWMAKVAFSELSGHKRD HDAFMARILPCVEGDAGDDAQLLQFLNDWSLEHFNLHNPKVKRYVLEYSERLNKIN >Mature_136_residues MLLISWHADFSVGIPIIDEHNQQFIKLINMVSEQFGQGFCTESRTVLLKTVVSLSRFYFEYEERWMAKVAFSELSGHKRD HDAFMARILPCVEGDAGDDAQLLQFLNDWSLEHFNLHNPKVKRYVLEYSERLNKIN
Specific function: Unknown
COG id: COG2703
COG function: function code P; Hemerythrin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15954; Mature: 15954
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLISWHADFSVGIPIIDEHNQQFIKLINMVSEQFGQGFCTESRTVLLKTVVSLSRFYFE CEEEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH YEERWMAKVAFSELSGHKRDHDAFMARILPCVEGDAGDDAQLLQFLNDWSLEHFNLHNPK HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHH VKRYVLEYSERLNKIN HHHHHHHHHHHHHCCC >Mature Secondary Structure MLLISWHADFSVGIPIIDEHNQQFIKLINMVSEQFGQGFCTESRTVLLKTVVSLSRFYFE CEEEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH YEERWMAKVAFSELSGHKRDHDAFMARILPCVEGDAGDDAQLLQFLNDWSLEHFNLHNPK HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHH VKRYVLEYSERLNKIN HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA