| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is zraS [H]
Identifier: 197118621
GI number: 197118621
Start: 2609918
End: 2611936
Strand: Direct
Name: zraS [H]
Synonym: Gbem_2240
Alternate gene names: 197118621
Gene position: 2609918-2611936 (Clockwise)
Preceding gene: 197118620
Following gene: 197118622
Centisome position: 56.55
GC content: 62.31
Gene sequence:
>2019_bases ATGCTCAAGCGTTTCCCGATCAAGGCCAAGCTCACCTTCGGGGCGCTGGCGCCGCTTTTCGTCGCCTTCTTCATCTGCTC CCTGGCCGGCCTCTACATCATCAACGAGAAGATCGCGAGCCAGGCGCAGGAAAAGGTGCGCACCGACCTCAACTCCGCGC GTGAGGTCTACAGAAACGAGCTGGACCGGATCCGCGAGTTCATCGATCTCACCGCCACCAACCCCTACAACTCCTCCTCC ATCGTCGCCGGCGATCATGAAATCCAGGCTCTTTTGCGCCAGCGGCTCTACAAGAAACGGCTGGACATCCTGACCGCCGT GGACGCGAAGGGGCGGGTTTTGTACCGTGCCCACACCCCGAGCCTTGCCGGCGACCTGCAAAAGAGCTACTTCGTGCAGC AGGCGCTGAAAGGGGTGGCGGTAACGGGGACGGCGCTTATGGGCGAGCAGGAACTGGCCCGGGAGGGTGTGGCGCTATCC AGCCGCGCCACCATTCCGCTGGTCTCCACGCCGCATGCCCGTCCGCGCAACGACGCGATCGAAAAAACGGGGATGGTAAT GGTCTCCGCCGCCCCCTTGAGAAACCATGCCGGGCAGATCATAGGCGCCCTGTACGGCGCGGTCCTGCTCAACAACAACA ACGCCCTGGTCGACAAGATCAAAGAGATCGTGTACGAGGGGGTGCAGTTCAACGGCACGGACGTGGGAAGCGCCACCATC TTTTTGGGCGACGCCCGGATCGCGACCAACGTCCGCCTGACCGACGGCGCCCGCGCCATAGGGACCAGGGTATCCGAAGA GGTGTACCAGCGGGTGATCGTGGAGAAAAAGAAGTGGATCCGGCGCGCCTTCGTGGTGAACGACTGGTACTTCACCGCCT ACGAGCCGATCCTGGACCTGCATGGAAAGGCGATCGGGTCGCTCTACGTCGGGATGCTGGAGAAGCCTTACACCCACATG CAAAAAAGCGTCAACTCGATCCTGTACATGGTGCTCTTCGTCACCTCGCTGATCGGGCTTGCGGTCTCCGGCTTCATCGC CACCCTCCTCGCCCGTCCCATCAAGGAGCTGGAGAAGCTGGCGCACCGGGTGGCGCGCGGTGAGCGCAACCTGCAGATGG AGGTGCACACAAAGGACGAGGTCGGGGACCTGGCCGACGCCTTCAACCTGATGACCAGAGCCCTGAGCCGCCAGGAGGCC GAAATAGGTCTCTTGCACCGCGCGCTGGAGCTTAAGGTGGAGGAGCGGACCGCGCAACTCTCCGACAAGAACCGCCTGCT TTTGCAGACCCAGGCGGACCTGGCCCGCGCCGAGAAGCTTGCCGACCTGGGGATCGTCGCCGCCGGCGTAGCCCACGAGA TCAACACCCCGCTTGCCATCATCCGCGGCAACGCCGAGGTGCTGGAGATGTGCCTTCCGCCCGAGCATCCCAACCATGAG GAGGTCGAGATCATCAGCATGCAGACCGAGCGCATGGCGAAGATCGTCGGCAACCTGCTCACCTTCGCGCGCCAGAAATC CCTGAACCAGAGGGAGTTCATGGTGCACGAGATCCTGGACGACATCGTGACGCAGATCAGGCATCAGGTTCCCATGGACG CCATCTCGGTGCAGTGGGAATACGACATGAACCTGGGTGCGGTTACTGGGGATACCGACCAGCTGCGGCAGGTATTCAGC AACATCATCCTGAACGCGGTGCAGGCGATGCTTCCCGAGGGAGGAACCCTCAGGCTCACCACCCGGCCCCACGGCCCCGG CAACGGATGCGAAGTTGAGATCCGCGACACCGGCAAAGGTATCCCTGCCGAGCATCTGGAAAAGATCTTCACCCCGTTTT TCACCACCAGGGACAGCGGCACCGGGCTTGGCCTCTCCGTTTCCTACGGCATCGTTAGGGACCACGGCGGCGACATCCAG GTTTCCAGCACGCCGGGAGCCGGTACCTGCTTCAAGATTGTCTTGCCGGGGGAAACGGAAACGGCACAGGAAACGCCGGA AAACGTCGCAGATCTTTAA
Upstream 100 bases:
>100_bases GGAACAACAAAAGCCGCGCCGCGAAGATCCTCGAGATAGCCAGGCGCACGCTGGACCGGAAGATCGAGGAGTACGGCCTG GAAGACGGGGGCTCCCGCTG
Downstream 100 bases:
>100_bases AGTAAAACTTTCATTTCAGAGGAGCAAATACATGAGTATGCAGTGGACCAGCGATCTAGCGACAGGAGTAGCGGAAATAG ATAACCAGCACAAGGAGATT
Product: HAMP domain-containing sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 672; Mature: 672
Protein sequence:
>672_residues MLKRFPIKAKLTFGALAPLFVAFFICSLAGLYIINEKIASQAQEKVRTDLNSAREVYRNELDRIREFIDLTATNPYNSSS IVAGDHEIQALLRQRLYKKRLDILTAVDAKGRVLYRAHTPSLAGDLQKSYFVQQALKGVAVTGTALMGEQELAREGVALS SRATIPLVSTPHARPRNDAIEKTGMVMVSAAPLRNHAGQIIGALYGAVLLNNNNALVDKIKEIVYEGVQFNGTDVGSATI FLGDARIATNVRLTDGARAIGTRVSEEVYQRVIVEKKKWIRRAFVVNDWYFTAYEPILDLHGKAIGSLYVGMLEKPYTHM QKSVNSILYMVLFVTSLIGLAVSGFIATLLARPIKELEKLAHRVARGERNLQMEVHTKDEVGDLADAFNLMTRALSRQEA EIGLLHRALELKVEERTAQLSDKNRLLLQTQADLARAEKLADLGIVAAGVAHEINTPLAIIRGNAEVLEMCLPPEHPNHE EVEIISMQTERMAKIVGNLLTFARQKSLNQREFMVHEILDDIVTQIRHQVPMDAISVQWEYDMNLGAVTGDTDQLRQVFS NIILNAVQAMLPEGGTLRLTTRPHGPGNGCEVEIRDTGKGIPAEHLEKIFTPFFTTRDSGTGLGLSVSYGIVRDHGGDIQ VSSTPGAGTCFKIVLPGETETAQETPENVADL
Sequences:
>Translated_672_residues MLKRFPIKAKLTFGALAPLFVAFFICSLAGLYIINEKIASQAQEKVRTDLNSAREVYRNELDRIREFIDLTATNPYNSSS IVAGDHEIQALLRQRLYKKRLDILTAVDAKGRVLYRAHTPSLAGDLQKSYFVQQALKGVAVTGTALMGEQELAREGVALS SRATIPLVSTPHARPRNDAIEKTGMVMVSAAPLRNHAGQIIGALYGAVLLNNNNALVDKIKEIVYEGVQFNGTDVGSATI FLGDARIATNVRLTDGARAIGTRVSEEVYQRVIVEKKKWIRRAFVVNDWYFTAYEPILDLHGKAIGSLYVGMLEKPYTHM QKSVNSILYMVLFVTSLIGLAVSGFIATLLARPIKELEKLAHRVARGERNLQMEVHTKDEVGDLADAFNLMTRALSRQEA EIGLLHRALELKVEERTAQLSDKNRLLLQTQADLARAEKLADLGIVAAGVAHEINTPLAIIRGNAEVLEMCLPPEHPNHE EVEIISMQTERMAKIVGNLLTFARQKSLNQREFMVHEILDDIVTQIRHQVPMDAISVQWEYDMNLGAVTGDTDQLRQVFS NIILNAVQAMLPEGGTLRLTTRPHGPGNGCEVEIRDTGKGIPAEHLEKIFTPFFTTRDSGTGLGLSVSYGIVRDHGGDIQ VSSTPGAGTCFKIVLPGETETAQETPENVADL >Mature_672_residues MLKRFPIKAKLTFGALAPLFVAFFICSLAGLYIINEKIASQAQEKVRTDLNSAREVYRNELDRIREFIDLTATNPYNSSS IVAGDHEIQALLRQRLYKKRLDILTAVDAKGRVLYRAHTPSLAGDLQKSYFVQQALKGVAVTGTALMGEQELAREGVALS SRATIPLVSTPHARPRNDAIEKTGMVMVSAAPLRNHAGQIIGALYGAVLLNNNNALVDKIKEIVYEGVQFNGTDVGSATI FLGDARIATNVRLTDGARAIGTRVSEEVYQRVIVEKKKWIRRAFVVNDWYFTAYEPILDLHGKAIGSLYVGMLEKPYTHM QKSVNSILYMVLFVTSLIGLAVSGFIATLLARPIKELEKLAHRVARGERNLQMEVHTKDEVGDLADAFNLMTRALSRQEA EIGLLHRALELKVEERTAQLSDKNRLLLQTQADLARAEKLADLGIVAAGVAHEINTPLAIIRGNAEVLEMCLPPEHPNHE EVEIISMQTERMAKIVGNLLTFARQKSLNQREFMVHEILDDIVTQIRHQVPMDAISVQWEYDMNLGAVTGDTDQLRQVFS NIILNAVQAMLPEGGTLRLTTRPHGPGNGCEVEIRDTGKGIPAEHLEKIFTPFFTTRDSGTGLGLSVSYGIVRDHGGDIQ VSSTPGAGTCFKIVLPGETETAQETPENVADL
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=234, Percent_Identity=35.042735042735, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI1788549, Length=232, Percent_Identity=36.2068965517241, Blast_Score=139, Evalue=6e-34, Organism=Escherichia coli, GI1790300, Length=247, Percent_Identity=33.1983805668016, Blast_Score=119, Evalue=8e-28, Organism=Escherichia coli, GI87081816, Length=326, Percent_Identity=28.2208588957055, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI145693157, Length=226, Percent_Identity=31.4159292035398, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1789149, Length=357, Percent_Identity=25.4901960784314, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1786600, Length=227, Percent_Identity=29.5154185022026, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI87082128, Length=221, Percent_Identity=28.0542986425339, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1786912, Length=221, Percent_Identity=26.6968325791855, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1788393, Length=326, Percent_Identity=24.5398773006135, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI48994928, Length=238, Percent_Identity=27.3109243697479, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI1788713, Length=225, Percent_Identity=24.8888888888889, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 74083; Mature: 74083
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRFPIKAKLTFGALAPLFVAFFICSLAGLYIINEKIASQAQEKVRTDLNSAREVYRNE CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDRIREFIDLTATNPYNSSSIVAGDHEIQALLRQRLYKKRLDILTAVDAKGRVLYRAHTP HHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCC SLAGDLQKSYFVQQALKGVAVTGTALMGEQELAREGVALSSRATIPLVSTPHARPRNDAI CHHHHHHHHHHHHHHHCCEEEECHHHCCHHHHHHCCCEECCCCCEEEEECCCCCCCCHHH EKTGMVMVSAAPLRNHAGQIIGALYGAVLLNNNNALVDKIKEIVYEGVQFNGTDVGSATI HHCCEEEEECCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEE FLGDARIATNVRLTDGARAIGTRVSEEVYQRVIVEKKKWIRRAFVVNDWYFTAYEPILDL EEECCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHH HGKAIGSLYVGMLEKPYTHMQKSVNSILYMVLFVTSLIGLAVSGFIATLLARPIKELEKL CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHRVARGERNLQMEVHTKDEVGDLADAFNLMTRALSRQEAEIGLLHRALELKVEERTAQL HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDKNRLLLQTQADLARAEKLADLGIVAAGVAHEINTPLAIIRGNAEVLEMCLPPEHPNHE CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCC EVEIISMQTERMAKIVGNLLTFARQKSLNQREFMVHEILDDIVTQIRHQVPMDAISVQWE CEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE YDMNLGAVTGDTDQLRQVFSNIILNAVQAMLPEGGTLRLTTRPHGPGNGCEVEIRDTGKG ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCC IPAEHLEKIFTPFFTTRDSGTGLGLSVSYGIVRDHGGDIQVSSTPGAGTCFKIVLPGETE CCHHHHHHHHHHHHCCCCCCCCCEEEEEECEEEECCCEEEEECCCCCCCEEEEEECCCCC TAQETPENVADL CHHCCCHHHCCC >Mature Secondary Structure MLKRFPIKAKLTFGALAPLFVAFFICSLAGLYIINEKIASQAQEKVRTDLNSAREVYRNE CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDRIREFIDLTATNPYNSSSIVAGDHEIQALLRQRLYKKRLDILTAVDAKGRVLYRAHTP HHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCC SLAGDLQKSYFVQQALKGVAVTGTALMGEQELAREGVALSSRATIPLVSTPHARPRNDAI CHHHHHHHHHHHHHHHCCEEEECHHHCCHHHHHHCCCEECCCCCEEEEECCCCCCCCHHH EKTGMVMVSAAPLRNHAGQIIGALYGAVLLNNNNALVDKIKEIVYEGVQFNGTDVGSATI HHCCEEEEECCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEE FLGDARIATNVRLTDGARAIGTRVSEEVYQRVIVEKKKWIRRAFVVNDWYFTAYEPILDL EEECCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHH HGKAIGSLYVGMLEKPYTHMQKSVNSILYMVLFVTSLIGLAVSGFIATLLARPIKELEKL CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHRVARGERNLQMEVHTKDEVGDLADAFNLMTRALSRQEAEIGLLHRALELKVEERTAQL HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDKNRLLLQTQADLARAEKLADLGIVAAGVAHEINTPLAIIRGNAEVLEMCLPPEHPNHE CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCC EVEIISMQTERMAKIVGNLLTFARQKSLNQREFMVHEILDDIVTQIRHQVPMDAISVQWE CEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE YDMNLGAVTGDTDQLRQVFSNIILNAVQAMLPEGGTLRLTTRPHGPGNGCEVEIRDTGKG ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCC IPAEHLEKIFTPFFTTRDSGTGLGLSVSYGIVRDHGGDIQVSSTPGAGTCFKIVLPGETE CCHHHHHHHHHHHHCCCCCCCCCEEEEEECEEEECCCEEEEECCCCCCCEEEEEECCCCC TAQETPENVADL CHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11243806 [H]