| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cheW-15 [H]
Identifier: 197118615
GI number: 197118615
Start: 2599360
End: 2599857
Strand: Reverse
Name: cheW-15 [H]
Synonym: Gbem_2234
Alternate gene names: 197118615
Gene position: 2599857-2599360 (Counterclockwise)
Preceding gene: 197118616
Following gene: 197118609
Centisome position: 56.33
GC content: 57.63
Gene sequence:
>498_bases ATGTCGACAGCCATAGTGCCGGTAAAAGCCGGCGAATCGAAAAGCGAACTCATCCAGCTGGTCAGCTTCAATCTCGGCGC CGAAGAGTACGCAGTCGAGGTGCTAAAGGTGCGCGAAATCATCAGGATGACGCCGATAACCCATATCCCCAATACGCCCC CCAGCGTGGAAGGGATCATTAACCTGCGCGGCAAGGTGATTCCCATCATCTCGCTTCGCAATCGCTTCGGGATGTCGAGC ACCGAAGACGATCAGCACACAAGAATCATGGTAATGGACATCGACGGCAAGCTGATGGGGTTCATCGTCGACGGGGTGTC GGAGGTGATCCGCATTTCCAACGCCGAGATCCAGCCTCCTCCGAGCATCGCCGCCGGCGGCATAGATCAGGACTTCATCT GCGGGGTCATCAAGCACGCGGAGCAGTTGCTGCTTATGCTGCAGCTGGACCGGATGTTCACCAGCGAAGAGCAGGACGCC TTCGCCGGGATGGCATAG
Upstream 100 bases:
>100_bases CGCTTTAGAATTCGCCTATCCTGCCGATAATCAACAAGTAGGCAGCCAGGATCTGGGCCGAATTGCAAAAGACGATCAAG ACATCCCCCGGAGGAAACAC
Downstream 100 bases:
>100_bases GGCTTAAACAAAGGGGACTGGCTCCGTCAGGTGCCTGTCCCCTTTGCGCCTGGGGAGGCTGGTTGAGTTGAAAGAAACGT TCCGATAGAGGGACAGGCAC
Product: chemotaxis protein CheW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSTAIVPVKAGESKSELIQLVSFNLGAEEYAVEVLKVREIIRMTPITHIPNTPPSVEGIINLRGKVIPIISLRNRFGMSS TEDDQHTRIMVMDIDGKLMGFIVDGVSEVIRISNAEIQPPPSIAAGGIDQDFICGVIKHAEQLLLMLQLDRMFTSEEQDA FAGMA
Sequences:
>Translated_165_residues MSTAIVPVKAGESKSELIQLVSFNLGAEEYAVEVLKVREIIRMTPITHIPNTPPSVEGIINLRGKVIPIISLRNRFGMSS TEDDQHTRIMVMDIDGKLMGFIVDGVSEVIRISNAEIQPPPSIAAGGIDQDFICGVIKHAEQLLLMLQLDRMFTSEEQDA FAGMA >Mature_164_residues STAIVPVKAGESKSELIQLVSFNLGAEEYAVEVLKVREIIRMTPITHIPNTPPSVEGIINLRGKVIPIISLRNRFGMSST EDDQHTRIMVMDIDGKLMGFIVDGVSEVIRISNAEIQPPPSIAAGGIDQDFICGVIKHAEQLLLMLQLDRMFTSEEQDAF AGMA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=139, Percent_Identity=31.6546762589928, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 18076; Mature: 17945
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAIVPVKAGESKSELIQLVSFNLGAEEYAVEVLKVREIIRMTPITHIPNTPPSVEGII CCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHE NLRGKVIPIISLRNRFGMSSTEDDQHTRIMVMDIDGKLMGFIVDGVSEVIRISNAEIQPP ECCCCEEEEEEEHHHCCCCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCC PSIAAGGIDQDFICGVIKHAEQLLLMLQLDRMFTSEEQDAFAGMA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure STAIVPVKAGESKSELIQLVSFNLGAEEYAVEVLKVREIIRMTPITHIPNTPPSVEGII CCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHE NLRGKVIPIISLRNRFGMSSTEDDQHTRIMVMDIDGKLMGFIVDGVSEVIRISNAEIQPP ECCCCEEEEEEEHHHCCCCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCC PSIAAGGIDQDFICGVIKHAEQLLLMLQLDRMFTSEEQDAFAGMA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7623670; 11481430 [H]