| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is 197118613
Identifier: 197118613
GI number: 197118613
Start: 2596980
End: 2597504
Strand: Direct
Name: 197118613
Synonym: Gbem_2232
Alternate gene names: NA
Gene position: 2596980-2597504 (Clockwise)
Preceding gene: 197118612
Following gene: 197118614
Centisome position: 56.27
GC content: 58.29
Gene sequence:
>525_bases ATGGTGCAGTCAACGGCGGACCTGAAACGACTCAAGGGGGTCGGAATAACCCTCGAAAAACGTCTCTTTGACGCAGGTTT CGACAGCTTTTCCAAGATAGCCGAGGCAGGCGAGGAAGGACTGAAGAAGGTTCGGGGCATGAGCCCGCGTACTATGAGCT CAATCGTGGTGCAATCACGGCAGCTTGCCGGGACGGAGCGGCACCAGGAGACCGAACCTGCGGACGCCATGCATCAGCGG GTTGCCGAGGTACGGGGCAAGGTGGAGACCCTGGCGGAGAAAACCCGGGACCGCTTCGGCGAGGAGATGAGCGACAAGTG CGGCAGAAAACTCAGCTCCGATCTGAACCGGATCGAGATGGCGCTGCTCCAGATGCACGATTTCGGCAAGAAACGAGGCA AACGCGCAGACAAGGCGCTGTTAAAGGCGGAGAAAAGAGTCACAGGGCTGGAGGACGCAACTCTCAAGAAAGTCCGCAAG GGGTTTAAGAGAGCAAAGAAGGCGGTACTGAAAGCCCTCCGCTGA
Upstream 100 bases:
>100_bases CATCACCTCCCGCAGCAAGGCGCTGGACCGCCTGCAAAACGACGGGCGATGAGCTGCTTCATTCAAACCACAACCGATTG AACGACAAGGAGCGTGCGCG
Downstream 100 bases:
>100_bases TACTGTGTCTGCAGTTCTTCACTGCATTGCCAGAGGAGCTCTCTCTTGGTACAATCCCTGCCATCCTGTCATCTAAGAGA CCCAATAGCATCTGGTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MVQSTADLKRLKGVGITLEKRLFDAGFDSFSKIAEAGEEGLKKVRGMSPRTMSSIVVQSRQLAGTERHQETEPADAMHQR VAEVRGKVETLAEKTRDRFGEEMSDKCGRKLSSDLNRIEMALLQMHDFGKKRGKRADKALLKAEKRVTGLEDATLKKVRK GFKRAKKAVLKALR
Sequences:
>Translated_174_residues MVQSTADLKRLKGVGITLEKRLFDAGFDSFSKIAEAGEEGLKKVRGMSPRTMSSIVVQSRQLAGTERHQETEPADAMHQR VAEVRGKVETLAEKTRDRFGEEMSDKCGRKLSSDLNRIEMALLQMHDFGKKRGKRADKALLKAEKRVTGLEDATLKKVRK GFKRAKKAVLKALR >Mature_174_residues MVQSTADLKRLKGVGITLEKRLFDAGFDSFSKIAEAGEEGLKKVRGMSPRTMSSIVVQSRQLAGTERHQETEPADAMHQR VAEVRGKVETLAEKTRDRFGEEMSDKCGRKLSSDLNRIEMALLQMHDFGKKRGKRADKALLKAEKRVTGLEDATLKKVRK GFKRAKKAVLKALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19513; Mature: 19513
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQSTADLKRLKGVGITLEKRLFDAGFDSFSKIAEAGEEGLKKVRGMSPRTMSSIVVQSR CCCCHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH QLAGTERHQETEPADAMHQRVAEVRGKVETLAEKTRDRFGEEMSDKCGRKLSSDLNRIEM HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLQMHDFGKKRGKRADKALLKAEKRVTGLEDATLKKVRKGFKRAKKAVLKALR HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVQSTADLKRLKGVGITLEKRLFDAGFDSFSKIAEAGEEGLKKVRGMSPRTMSSIVVQSR CCCCHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH QLAGTERHQETEPADAMHQRVAEVRGKVETLAEKTRDRFGEEMSDKCGRKLSSDLNRIEM HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLQMHDFGKKRGKRADKALLKAEKRVTGLEDATLKKVRKGFKRAKKAVLKALR HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA