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The map label for this gene is ydiK [C]

Identifier: 197118593

GI number: 197118593

Start: 2573714

End: 2574781

Strand: Reverse

Name: ydiK [C]

Synonym: Gbem_2212

Alternate gene names: 197118593

Gene position: 2574781-2573714 (Counterclockwise)

Preceding gene: 197118594

Following gene: 197118592

Centisome position: 55.79

GC content: 63.01

Gene sequence:

>1068_bases
ATGGATAAAAAAACCTATTTCAGCATTCTCGCCGCTTTTTTGACCATAGCTGCCATAGCTCTCATCGTCCTACTCGCCGT
CCCCATACTTAAGCCCCTCGCCTGGGCGCTCATCATCGGCATCGCCACCATGCCCCACTACAACAGGATCCTCAAGCGCT
TTCCCGAGCGTGCCGGCCGTGCGTCGGGACTTATGGTGCTGGCGGTGAGCTTGTGCCTGGTGCTTCCCGCGACCTGGCTG
GTGGTGACGGCCGCCGTCAGCGCCCCCGACTGGTACCGCCAGGTCGAGCAACTAGTTCAAGATTTCAGCAAGACAGGAAG
CGGAGCGCTGAGCCAGTTGCCGTTCTACGACCGGATCATGGGCCTGGTGCAGAAGTTCGGCATCGATCTGGCCGGGATCG
GTCAAAAAGCCGCCTCCAGCGCTTCGACCATCGTCCTCAACACCGCCACCGACATGGTCCGCAACCTTTTCGATCTCATC
TTCACCCTGCTGGTCGCCCTGTTCCTGCTTTTCTTCGTTTACCGCGACGGAGAACGGGCAGTCTCGGTCTGCATCGCAAA
GCTCGCCCCGGACCAGCGCAGGGCGCAGCACTTAGCGGCCCAGATCCGTTCCATCACCACGGCCGTCACCGTCGGCACCC
TGCTTACCTGCGCCACCCAGGGGGTCCTCGCTGGTCTCGGCTACTGGGTCGCCGGCGTTCCCGCGCCTATCTTTTGCGGC
GCTCTCACCGCCATCGCCGCTTTGGTGCCGGTGGTCGGCACAGGCGTCGTCTGGGTCCCGCTGGTCGCGCTTATTGCAGT
GCAAGGTTCCTACCTTAACGCCGTCCTTCTTGCGCTATGGTGCATCCTCTTCGTGGGTGTAGCCGATAACGCCATCCGGC
CGCTCGCCGTCGGCGCCTCCAGCGACGTCTCGGTCCTCGCCGTCGTCGCCGGGGCCATCTGCGGCGTGGTGATCATGGGG
GTCCTCGGGCTGATCGTGGGGCCGTTGATCTTCGCGGTCCTGTTCAGCATCTGGGACGATGTCGTTGCCGAACCGGGATC
GATCGAATACGGCGGCGAAGCCCCCTGA

Upstream 100 bases:

>100_bases
CGCGCCGCCTGCCGCTTACCAGCTGTCCAACCGGGCCACTTCCCGTGCACTCCGCGGCAATCCTGATATCCTATGCCAGT
CCAACTACAGGGGGAGACCA

Downstream 100 bases:

>100_bases
CGCCCGGAGGTATTGTCATATGAAACGCGAACGCATAGGAGAGTTACTCTGCGCCAGAATCGCCGCCGGCGTCCTTGCGC
TGGCACTGGTTTTATCCGCC

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MDKKTYFSILAAFLTIAAIALIVLLAVPILKPLAWALIIGIATMPHYNRILKRFPERAGRASGLMVLAVSLCLVLPATWL
VVTAAVSAPDWYRQVEQLVQDFSKTGSGALSQLPFYDRIMGLVQKFGIDLAGIGQKAASSASTIVLNTATDMVRNLFDLI
FTLLVALFLLFFVYRDGERAVSVCIAKLAPDQRRAQHLAAQIRSITTAVTVGTLLTCATQGVLAGLGYWVAGVPAPIFCG
ALTAIAALVPVVGTGVVWVPLVALIAVQGSYLNAVLLALWCILFVGVADNAIRPLAVGASSDVSVLAVVAGAICGVVIMG
VLGLIVGPLIFAVLFSIWDDVVAEPGSIEYGGEAP

Sequences:

>Translated_355_residues
MDKKTYFSILAAFLTIAAIALIVLLAVPILKPLAWALIIGIATMPHYNRILKRFPERAGRASGLMVLAVSLCLVLPATWL
VVTAAVSAPDWYRQVEQLVQDFSKTGSGALSQLPFYDRIMGLVQKFGIDLAGIGQKAASSASTIVLNTATDMVRNLFDLI
FTLLVALFLLFFVYRDGERAVSVCIAKLAPDQRRAQHLAAQIRSITTAVTVGTLLTCATQGVLAGLGYWVAGVPAPIFCG
ALTAIAALVPVVGTGVVWVPLVALIAVQGSYLNAVLLALWCILFVGVADNAIRPLAVGASSDVSVLAVVAGAICGVVIMG
VLGLIVGPLIFAVLFSIWDDVVAEPGSIEYGGEAP
>Mature_355_residues
MDKKTYFSILAAFLTIAAIALIVLLAVPILKPLAWALIIGIATMPHYNRILKRFPERAGRASGLMVLAVSLCLVLPATWL
VVTAAVSAPDWYRQVEQLVQDFSKTGSGALSQLPFYDRIMGLVQKFGIDLAGIGQKAASSASTIVLNTATDMVRNLFDLI
FTLLVALFLLFFVYRDGERAVSVCIAKLAPDQRRAQHLAAQIRSITTAVTVGTLLTCATQGVLAGLGYWVAGVPAPIFCG
ALTAIAALVPVVGTGVVWVPLVALIAVQGSYLNAVLLALWCILFVGVADNAIRPLAVGASSDVSVLAVVAGAICGVVIMG
VLGLIVGPLIFAVLFSIWDDVVAEPGSIEYGGEAP

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=335, Percent_Identity=26.865671641791, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 37288; Mature: 37288

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKTYFSILAAFLTIAAIALIVLLAVPILKPLAWALIIGIATMPHYNRILKRFPERAGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
ASGLMVLAVSLCLVLPATWLVVTAAVSAPDWYRQVEQLVQDFSKTGSGALSQLPFYDRIM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHH
GLVQKFGIDLAGIGQKAASSASTIVLNTATDMVRNLFDLIFTLLVALFLLFFVYRDGERA
HHHHHHCCCHHHCCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VSVCIAKLAPDQRRAQHLAAQIRSITTAVTVGTLLTCATQGVLAGLGYWVAGVPAPIFCG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ALTAIAALVPVVGTGVVWVPLVALIAVQGSYLNAVLLALWCILFVGVADNAIRPLAVGAS
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SDVSVLAVVAGAICGVVIMGVLGLIVGPLIFAVLFSIWDDVVAEPGSIEYGGEAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDKKTYFSILAAFLTIAAIALIVLLAVPILKPLAWALIIGIATMPHYNRILKRFPERAGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
ASGLMVLAVSLCLVLPATWLVVTAAVSAPDWYRQVEQLVQDFSKTGSGALSQLPFYDRIM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHH
GLVQKFGIDLAGIGQKAASSASTIVLNTATDMVRNLFDLIFTLLVALFLLFFVYRDGERA
HHHHHHCCCHHHCCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VSVCIAKLAPDQRRAQHLAAQIRSITTAVTVGTLLTCATQGVLAGLGYWVAGVPAPIFCG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ALTAIAALVPVVGTGVVWVPLVALIAVQGSYLNAVLLALWCILFVGVADNAIRPLAVGAS
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SDVSVLAVVAGAICGVVIMGVLGLIVGPLIFAVLFSIWDDVVAEPGSIEYGGEAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]