| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118592
Identifier: 197118592
GI number: 197118592
Start: 2572765
End: 2573694
Strand: Reverse
Name: 197118592
Synonym: Gbem_2211
Alternate gene names: NA
Gene position: 2573694-2572765 (Counterclockwise)
Preceding gene: 197118593
Following gene: 197118591
Centisome position: 55.77
GC content: 60.75
Gene sequence:
>930_bases ATGAAACGCGAACGCATAGGAGAGTTACTCTGCGCCAGAATCGCCGCCGGCGTCCTTGCGCTGGCACTGGTTTTATCCGC CGCCTCCGGTTGGGGAGCTGAACCGGGGAGCGACGCGGAACGAGCCCTACTGGCCAAATACTCCTCCATAAAGGACAAGC TGGAGAAAAACCAGTTCGGCGCTCCCATCTACCTCGAATCCACCGACTCCGAAGGGAAGGTGCGCGTCGACATGTACGGG GTGGTCCCGCATCCCTTCGAGACGGCACGGGAGGCGTTGCAGTCCCCGGCAAGCTGGTGCGACATCACCTCTCTGCATCT CAACATCAAGGCCTGCACCTTCAAGGCCAGTACCAACCCGCAGCAGGTCACCCTGTACAGCGGCCGGAAATACTACCAGC CCCCCTCAGACGCCTACCCGCTCAAGTTCGCCTTCACGCTCGTCTCGCAGACGCCCCGTCTCCTTGAGGTGAGGCTGGAG GCGGAGGAAGGGCCGTTCAGGACCAAGGACCACCGCATTGTGCTGCAGGCCGTTCCTCTCGGCGGCGCGACGACGCTGCT TCATTTCAGCTACACCTACAGCCAGGGCACCGTCGCGCGCTTGGCGATGAACGGGTATTTTTCTACCCTGGCGCGCGGCA AGGTCGGGTTCAGCGAGGTCACCGATAAGGGAGGTGAGCAGCATCTCGTCGAGGGGGCGAGGGGGGCCGTGGAACGGAAC ACCATGCGCTACTACCTCGCCCTGGAGACCTATCTCGACACCCTAAAGTACCCCGAGAACCAGCGCTTCGAGCAGCGCAT CAACCGCTGGTATGACCTGACGGCGAAGTACCCCAAGCAACTGAAAGAAAACGACAAGAGCAGCTACCTTGCCGCCAAGA GGATGGAACATAACCGGCAGGTGGAGCTGCAAAAAAAACTGGGTAATTGA
Upstream 100 bases:
>100_bases ATCTTCGCGGTCCTGTTCAGCATCTGGGACGATGTCGTTGCCGAACCGGGATCGATCGAATACGGCGGCGAAGCCCCCTG ACGCCCGGAGGTATTGTCAT
Downstream 100 bases:
>100_bases AGGATTTTTCGTGGCCGATCCGATCATCGAGCTGACCGGGATATGCAAATCGTTCCAGGAGGGGGAGCGGGAGCGGGTGG TTTTCCGTAACGCCTCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; NAD/FAD-Utilizing
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKRERIGELLCARIAAGVLALALVLSAASGWGAEPGSDAERALLAKYSSIKDKLEKNQFGAPIYLESTDSEGKVRVDMYG VVPHPFETAREALQSPASWCDITSLHLNIKACTFKASTNPQQVTLYSGRKYYQPPSDAYPLKFAFTLVSQTPRLLEVRLE AEEGPFRTKDHRIVLQAVPLGGATTLLHFSYTYSQGTVARLAMNGYFSTLARGKVGFSEVTDKGGEQHLVEGARGAVERN TMRYYLALETYLDTLKYPENQRFEQRINRWYDLTAKYPKQLKENDKSSYLAAKRMEHNRQVELQKKLGN
Sequences:
>Translated_309_residues MKRERIGELLCARIAAGVLALALVLSAASGWGAEPGSDAERALLAKYSSIKDKLEKNQFGAPIYLESTDSEGKVRVDMYG VVPHPFETAREALQSPASWCDITSLHLNIKACTFKASTNPQQVTLYSGRKYYQPPSDAYPLKFAFTLVSQTPRLLEVRLE AEEGPFRTKDHRIVLQAVPLGGATTLLHFSYTYSQGTVARLAMNGYFSTLARGKVGFSEVTDKGGEQHLVEGARGAVERN TMRYYLALETYLDTLKYPENQRFEQRINRWYDLTAKYPKQLKENDKSSYLAAKRMEHNRQVELQKKLGN >Mature_309_residues MKRERIGELLCARIAAGVLALALVLSAASGWGAEPGSDAERALLAKYSSIKDKLEKNQFGAPIYLESTDSEGKVRVDMYG VVPHPFETAREALQSPASWCDITSLHLNIKACTFKASTNPQQVTLYSGRKYYQPPSDAYPLKFAFTLVSQTPRLLEVRLE AEEGPFRTKDHRIVLQAVPLGGATTLLHFSYTYSQGTVARLAMNGYFSTLARGKVGFSEVTDKGGEQHLVEGARGAVERN TMRYYLALETYLDTLKYPENQRFEQRINRWYDLTAKYPKQLKENDKSSYLAAKRMEHNRQVELQKKLGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34728; Mature: 34728
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRERIGELLCARIAAGVLALALVLSAASGWGAEPGSDAERALLAKYSSIKDKLEKNQFG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC APIYLESTDSEGKVRVDMYGVVPHPFETAREALQSPASWCDITSLHLNIKACTFKASTNP CCEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHCCCHHCEEEEEEEEEEEEEEECCCCC QQVTLYSGRKYYQPPSDAYPLKFAFTLVSQTPRLLEVRLEAEEGPFRTKDHRIVLQAVPL CEEEEECCCEECCCCCCCCCHHHEEEHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECC GGATTLLHFSYTYSQGTVARLAMNGYFSTLARGKVGFSEVTDKGGEQHLVEGARGAVERN CCCEEEEEEEEEECCCCEEHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHCCCHHHC TMRYYLALETYLDTLKYPENQRFEQRINRWYDLTAKYPKQLKENDKSSYLAAKRMEHNRQ CEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCH VELQKKLGN HHHHHHCCC >Mature Secondary Structure MKRERIGELLCARIAAGVLALALVLSAASGWGAEPGSDAERALLAKYSSIKDKLEKNQFG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC APIYLESTDSEGKVRVDMYGVVPHPFETAREALQSPASWCDITSLHLNIKACTFKASTNP CCEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHCCCHHCEEEEEEEEEEEEEEECCCCC QQVTLYSGRKYYQPPSDAYPLKFAFTLVSQTPRLLEVRLEAEEGPFRTKDHRIVLQAVPL CEEEEECCCEECCCCCCCCCHHHEEEHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECC GGATTLLHFSYTYSQGTVARLAMNGYFSTLARGKVGFSEVTDKGGEQHLVEGARGAVERN CCCEEEEEEEEEECCCCEEHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHCCCHHHC TMRYYLALETYLDTLKYPENQRFEQRINRWYDLTAKYPKQLKENDKSSYLAAKRMEHNRQ CEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCH VELQKKLGN HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA