| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118587
Identifier: 197118587
GI number: 197118587
Start: 2565592
End: 2565858
Strand: Reverse
Name: 197118587
Synonym: Gbem_2206
Alternate gene names: NA
Gene position: 2565858-2565592 (Counterclockwise)
Preceding gene: 197118589
Following gene: 197118586
Centisome position: 55.6
GC content: 53.93
Gene sequence:
>267_bases ATGAAGAAACTCATGGCTGTGTCACTTCTCTCGACTGTTCTGCTTGCTGCCTGCCAACCTGCCAACATCACCGCCGTAAA ATGGGACACCGGGGAAAAGGGAGCCAATGTCCAGACCAGGTGCGAGCGCGTCGATATGAGGGATCACTCGGAAATGCAGA GCGCGTTTGCCAAGTACGATGGCTGGAAACTGATCTACATCTCCGAGTACACGACCGGCAACAAAAGCGGTACCGACGGG GCAGTCTGCTTCGAGAAGGTGAAATAA
Upstream 100 bases:
>100_bases TGGACCTTTTTTTTATTTCTGTTGTATTTATGAACTCCGTATTATTGACACATCCTTACTGATAAGGTAATTTGCCCTAT CACACATTTCTGGAGGTACG
Downstream 100 bases:
>100_bases TATAGCTGGCTGACCCGCACACCGAAAGTCTCCCTCACCCCGACCCTCTCCCATAGGGAGAGGGAGAATGGACCCCTGCT CCGGGGGAGGGGAAGTGTGG
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MKKLMAVSLLSTVLLAACQPANITAVKWDTGEKGANVQTRCERVDMRDHSEMQSAFAKYDGWKLIYISEYTTGNKSGTDG AVCFEKVK
Sequences:
>Translated_88_residues MKKLMAVSLLSTVLLAACQPANITAVKWDTGEKGANVQTRCERVDMRDHSEMQSAFAKYDGWKLIYISEYTTGNKSGTDG AVCFEKVK >Mature_88_residues MKKLMAVSLLSTVLLAACQPANITAVKWDTGEKGANVQTRCERVDMRDHSEMQSAFAKYDGWKLIYISEYTTGNKSGTDG AVCFEKVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9737; Mature: 9737
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLMAVSLLSTVLLAACQPANITAVKWDTGEKGANVQTRCERVDMRDHSEMQSAFAKYD CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCC GWKLIYISEYTTGNKSGTDGAVCFEKVK CEEEEEEEEECCCCCCCCCCCEEEEECC >Mature Secondary Structure MKKLMAVSLLSTVLLAACQPANITAVKWDTGEKGANVQTRCERVDMRDHSEMQSAFAKYD CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCC GWKLIYISEYTTGNKSGTDGAVCFEKVK CEEEEEEEEECCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA