| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118589
Identifier: 197118589
GI number: 197118589
Start: 2568381
End: 2569508
Strand: Reverse
Name: 197118589
Synonym: Gbem_2208
Alternate gene names: NA
Gene position: 2569508-2568381 (Counterclockwise)
Preceding gene: 197118590
Following gene: 197118587
Centisome position: 55.68
GC content: 63.12
Gene sequence:
>1128_bases ATGCGCCGCCTCTATTACCTCATGGCCGCCTTGGTGATCCTCCTGTCTGCTTTGGGATACTTTTATGCCAGGAAAGGGAA GGAACCCGAGGCGGAGAAAACCTACAGCCTTAACGAGGCCTTGGGTGGGAGTGCGGCGGAAGGGTTCAATAGGGCCGAGA GGGCTAGGCGCTTCAGTTTCCCCGCGGATCACGGGCCGCACGAGGGATTCAGAAACGAGTGGTGGTACTTCACCGGGAAC CTGACCGGAGCCTCCGGGCGCCGCTTCGGCTACCAGCTCACCTTCTTCAGATCGGCCCTCACCCCGCATCCGGTAAAGAG GGAGTCTGCCTGGGGGACCAACGAGGTCTTCATGGCGCACTTCGCAGTGACCGACGTGGAGGGGAAGCGGTTCCGCTTCG GCGAGCGTTTCACCCGCGCCGCCCTTGGGCTCGCGGGTGCTGGAGGGCGCCCCCTTGCCGTGCGCCTGGAAGATTGGTCC GTCCTGGAGACGGGGGCAAAGCCTTGGAGCGCCAAACTGACCGCGGCCGATGGCGCCATGGCCATCGACCTGGACCTCAC GAGCCTGAAGCCGGTGATACTAAACGGGGAAGGGGGGCTCAGCCGAAAGAGCGGAGCTTCGGGAAACGCCTCCTATTACT ACAGCATCCCCAGGCTTAGCACCTCCGGTACCATCCGGATCGGCGAGGACTCCTTCAAGGTCTCTGGCATCTCCTGGCTC GATCGTGAATGGAGCACAAGCGCCCTGGACAAGGACCAGGCCGGCTGGGACTGGTTCGCGCTGCACCTTTCCGACGGCCG CGACATCATGTACTACCAGTTGCGCAGGCGCGACGGCAGCCGCGATCCATTCTCCGCAGGCACCCTGGTAGGTACCGGCG GCAGTTACCGGCATCTAAAACGCGAGGAGGTCCGACTTGAGCCGTTGCGGCGCTGGACCAGCCCGAAGAGTGGCGCCAGC TATCCCTCCGGCTGGCGCCTGAAGATACCGTCGCAAGGGATAGACATCGAGGTAGCGCCGCTTTTGGCCGACCAGGAATT GGCTGCAGGTTTCCGCTATTGGGAAGGGGCGGTGGAGGTGCGAGGGAGCACAGGCGGTTCGGGATATTTGGAGATGACGG GGTATTAG
Upstream 100 bases:
>100_bases TTGCTTCTTTCCGTGTCAGCGGCGCTTCTGGCCGGCATCTACCCGTCGCTCAGGATCGCCCGCAACTCTCCCGCGCTGGC CCTGAAGGAGGAGGATTAGC
Downstream 100 bases:
>100_bases TACGGTAGCTGCGCAGGGCTTGGGGAGGGGCTTGCTGGATCTTTTGGCGGGCCGGAAAAACAAAAAAGCGGTTAGCTTTC GCTAACCGCTTTGTGATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydroxyneurosporene Synthase; Attachment Protein; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MRRLYYLMAALVILLSALGYFYARKGKEPEAEKTYSLNEALGGSAAEGFNRAERARRFSFPADHGPHEGFRNEWWYFTGN LTGASGRRFGYQLTFFRSALTPHPVKRESAWGTNEVFMAHFAVTDVEGKRFRFGERFTRAALGLAGAGGRPLAVRLEDWS VLETGAKPWSAKLTAADGAMAIDLDLTSLKPVILNGEGGLSRKSGASGNASYYYSIPRLSTSGTIRIGEDSFKVSGISWL DREWSTSALDKDQAGWDWFALHLSDGRDIMYYQLRRRDGSRDPFSAGTLVGTGGSYRHLKREEVRLEPLRRWTSPKSGAS YPSGWRLKIPSQGIDIEVAPLLADQELAAGFRYWEGAVEVRGSTGGSGYLEMTGY
Sequences:
>Translated_375_residues MRRLYYLMAALVILLSALGYFYARKGKEPEAEKTYSLNEALGGSAAEGFNRAERARRFSFPADHGPHEGFRNEWWYFTGN LTGASGRRFGYQLTFFRSALTPHPVKRESAWGTNEVFMAHFAVTDVEGKRFRFGERFTRAALGLAGAGGRPLAVRLEDWS VLETGAKPWSAKLTAADGAMAIDLDLTSLKPVILNGEGGLSRKSGASGNASYYYSIPRLSTSGTIRIGEDSFKVSGISWL DREWSTSALDKDQAGWDWFALHLSDGRDIMYYQLRRRDGSRDPFSAGTLVGTGGSYRHLKREEVRLEPLRRWTSPKSGAS YPSGWRLKIPSQGIDIEVAPLLADQELAAGFRYWEGAVEVRGSTGGSGYLEMTGY >Mature_375_residues MRRLYYLMAALVILLSALGYFYARKGKEPEAEKTYSLNEALGGSAAEGFNRAERARRFSFPADHGPHEGFRNEWWYFTGN LTGASGRRFGYQLTFFRSALTPHPVKRESAWGTNEVFMAHFAVTDVEGKRFRFGERFTRAALGLAGAGGRPLAVRLEDWS VLETGAKPWSAKLTAADGAMAIDLDLTSLKPVILNGEGGLSRKSGASGNASYYYSIPRLSTSGTIRIGEDSFKVSGISWL DREWSTSALDKDQAGWDWFALHLSDGRDIMYYQLRRRDGSRDPFSAGTLVGTGGSYRHLKREEVRLEPLRRWTSPKSGAS YPSGWRLKIPSQGIDIEVAPLLADQELAAGFRYWEGAVEVRGSTGGSGYLEMTGY
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41581; Mature: 41581
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLYYLMAALVILLSALGYFYARKGKEPEAEKTYSLNEALGGSAAEGFNRAERARRFSF CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEHHHHCCCCHHHHHHHHHHHHHCCC PADHGPHEGFRNEWWYFTGNLTGASGRRFGYQLTFFRSALTPHPVKRESAWGTNEVFMAH CCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCEEEEE FAVTDVEGKRFRFGERFTRAALGLAGAGGRPLAVRLEDWSVLETGAKPWSAKLTAADGAM EEEEECCCCCEEHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCCCEEEEECCCCE AIDLDLTSLKPVILNGEGGLSRKSGASGNASYYYSIPRLSTSGTIRIGEDSFKVSGISWL EEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCEEECCCEEE DREWSTSALDKDQAGWDWFALHLSDGRDIMYYQLRRRDGSRDPFSAGTLVGTGGSYRHLK CCCCCCHHCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCHHHH REEVRLEPLRRWTSPKSGASYPSGWRLKIPSQGIDIEVAPLLADQELAAGFRYWEGAVEV HHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEECEECCHHHHHHHHEECCEEEE RGSTGGSGYLEMTGY ECCCCCCCEEEECCC >Mature Secondary Structure MRRLYYLMAALVILLSALGYFYARKGKEPEAEKTYSLNEALGGSAAEGFNRAERARRFSF CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEHHHHCCCCHHHHHHHHHHHHHCCC PADHGPHEGFRNEWWYFTGNLTGASGRRFGYQLTFFRSALTPHPVKRESAWGTNEVFMAH CCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCEEEEE FAVTDVEGKRFRFGERFTRAALGLAGAGGRPLAVRLEDWSVLETGAKPWSAKLTAADGAM EEEEECCCCCEEHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCCCEEEEECCCCE AIDLDLTSLKPVILNGEGGLSRKSGASGNASYYYSIPRLSTSGTIRIGEDSFKVSGISWL EEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCEEECCCEEE DREWSTSALDKDQAGWDWFALHLSDGRDIMYYQLRRRDGSRDPFSAGTLVGTGGSYRHLK CCCCCCHHCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCHHHH REEVRLEPLRRWTSPKSGASYPSGWRLKIPSQGIDIEVAPLLADQELAAGFRYWEGAVEV HHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEECEECCHHHHHHHHEECCEEEE RGSTGGSGYLEMTGY ECCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA