Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197118540

Identifier: 197118540

GI number: 197118540

Start: 2513191

End: 2513733

Strand: Reverse

Name: 197118540

Synonym: Gbem_2159

Alternate gene names: NA

Gene position: 2513733-2513191 (Counterclockwise)

Preceding gene: 197118541

Following gene: 197118539

Centisome position: 54.47

GC content: 60.04

Gene sequence:

>543_bases
ATGAAACGTTTTTCCCTCATCCTCATATGCGCAGTGCTGTTGAACTGCCAGCTTCTGGGCCAGGCAAACGCCGGTTTTTT
CGGCTTCGGCTCAGAAGTCAAGGGGAAGAGCGGCCTCGATTTCAGCCGTGGGTACGATCTGAACACGGTCGGGACGTTCT
CCGGGCGGGTGACTGAGTCGCCGCGGCTTGCTGAAAACGGGCAGTATCTCATCGAGATCGAGAGCGGATCGGAGACGGTG
AACCTAAGCGTCGGGCCGGAGAACTTCTGGGAGAAAAAGGGCATCCCGGTGAAAGTCGACGACGAGATCACCGCCAAGGG
TTCGCGTGCCCAGGGGCAAGACGGGAAAACCTATCTCCTCACGCAGAAGCTGGTAAACCGCAGTAACGGAAAACAGGTGG
AAATACGAAACGATCGCGGCGAGCCGGCATGGTCCGGACGCAGCGCCGGTGCAGCCCAGATGAGGGGCGGGATAGGATTC
CAAGGCGGCGGGTTCATGCGCGGCGGAGGAATGATGGGTGGCGGCGGCATGATGAGGCGCTGA

Upstream 100 bases:

>100_bases
GGGTTGCATCACATCTGGTAATGGTTGCGGTCAGGCGAGGGGCAGGACGGCGCGGGTCCTGCTAGCGGTATCGCGTCTGA
CCCATGCGGAGTCAATGGTA

Downstream 100 bases:

>100_bases
TCGCGGCCCAGGAGTGCGAATGACCAGATTGAAAACCTTCCGGATCATGTTTGTTGTTCTGATGCAGGCACTTTGCCTGC
TGACTCCGGGAGGGGTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKRFSLILICAVLLNCQLLGQANAGFFGFGSEVKGKSGLDFSRGYDLNTVGTFSGRVTESPRLAENGQYLIEIESGSETV
NLSVGPENFWEKKGIPVKVDDEITAKGSRAQGQDGKTYLLTQKLVNRSNGKQVEIRNDRGEPAWSGRSAGAAQMRGGIGF
QGGGFMRGGGMMGGGGMMRR

Sequences:

>Translated_180_residues
MKRFSLILICAVLLNCQLLGQANAGFFGFGSEVKGKSGLDFSRGYDLNTVGTFSGRVTESPRLAENGQYLIEIESGSETV
NLSVGPENFWEKKGIPVKVDDEITAKGSRAQGQDGKTYLLTQKLVNRSNGKQVEIRNDRGEPAWSGRSAGAAQMRGGIGF
QGGGFMRGGGMMGGGGMMRR
>Mature_180_residues
MKRFSLILICAVLLNCQLLGQANAGFFGFGSEVKGKSGLDFSRGYDLNTVGTFSGRVTESPRLAENGQYLIEIESGSETV
NLSVGPENFWEKKGIPVKVDDEITAKGSRAQGQDGKTYLLTQKLVNRSNGKQVEIRNDRGEPAWSGRSAGAAQMRGGIGF
QGGGFMRGGGMMGGGGMMRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19235; Mature: 19235

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFSLILICAVLLNCQLLGQANAGFFGFGSEVKGKSGLDFSRGYDLNTVGTFSGRVTES
CCCHHHHHHHHHHHCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
PRLAENGQYLIEIESGSETVNLSVGPENFWEKKGIPVKVDDEITAKGSRAQGQDGKTYLL
CCCCCCCCEEEEECCCCCEEEEEECCHHHHHCCCCCEEECCCEECCCCCCCCCCCCEEEE
TQKLVNRSNGKQVEIRNDRGEPAWSGRSAGAAQMRGGIGFQGGGFMRGGGMMGGGGMMRR
EHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCEECCCCCCCC
>Mature Secondary Structure
MKRFSLILICAVLLNCQLLGQANAGFFGFGSEVKGKSGLDFSRGYDLNTVGTFSGRVTES
CCCHHHHHHHHHHHCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
PRLAENGQYLIEIESGSETVNLSVGPENFWEKKGIPVKVDDEITAKGSRAQGQDGKTYLL
CCCCCCCCEEEEECCCCCEEEEEECCHHHHHCCCCCEEECCCEECCCCCCCCCCCCEEEE
TQKLVNRSNGKQVEIRNDRGEPAWSGRSAGAAQMRGGIGFQGGGFMRGGGMMGGGGMMRR
EHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA