Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197118539

Identifier: 197118539

GI number: 197118539

Start: 2512281

End: 2513171

Strand: Reverse

Name: 197118539

Synonym: Gbem_2158

Alternate gene names: NA

Gene position: 2513171-2512281 (Counterclockwise)

Preceding gene: 197118540

Following gene: 197118538

Centisome position: 54.45

GC content: 60.38

Gene sequence:

>891_bases
ATGACCAGATTGAAAACCTTCCGGATCATGTTTGTTGTTCTGATGCAGGCACTTTGCCTGCTGACTCCGGGAGGGGTGCG
TGCCGAAGGCCCATTGGTCTCGACCGGCGTCGGTTTCGAGTTCGCCTCAGGTTCGTACGGTCTCGGCACCAAGACCGATT
CCATCTACGTCCCCTTCACGCTGGCGGTCTATCCCTCTGAGCGGCTCGGGTTCCTGCTGGAGATCCCGTACGTCTACCAG
AGCAGTTCAGCCGTCAACACCGGCATCCTCCTGGGGCCAGGGGGAGGGCAGATGACCGGGATGCGCAAGGAGGCGGCCGC
AATGCCCGGAGCGGGTGGCACCATGTCCGGAACCGGCAGTGGCAGCGGGGGAGGGACCTCCTCCGGCAGCACCGTGTCGA
AGAAGTCCCGCCAAGGGGTAGGGGACCTGACCCTCAAGGGGGGGTACGTCCTCGTGCCGGAAGGGGAGTTTGTTCCAAGG
GTGCGCCCCTACCTCTTCGTCAAGTTCCCGACCGCCGACCGTGAGCAGATGCTGGGGACCGGGGAATTCGACGAGGGGTT
CGCAGTGGAATTCTCCAAGCAGTACGGCAACTGGTACTCCTTCGCGGAAGGAGGCTACACCTTTCAAGGCACCTCTGCCG
TCTTGCCGCTCAAGGATTACTTCAGCTTTAACGCCGGAACAGGTTATCAACTGGGAGAAAGGTTTCTCCCCATGATGCTC
ATCAAAGCGGCCGGTGCTCCCATAGAGGGAGCCAGCGACCTGCTGGAGCTGAGACTTAAATTGAAAATGCTGGTCGGGGC
CAAAAGCGGGATCGACGGGTATATCGCCAAGGGCATTACCCGGAGTTCCCCTGACTATGGCGTCGGGCTGGCCATCTACC
ATGATTTCTAA

Upstream 100 bases:

>100_bases
AGGGGCGGGATAGGATTCCAAGGCGGCGGGTTCATGCGCGGCGGAGGAATGATGGGTGGCGGCGGCATGATGAGGCGCTG
ATCGCGGCCCAGGAGTGCGA

Downstream 100 bases:

>100_bases
GACAAACAAGAGAAGGGGGCACCATATGAAAAAACAGATCGCGGCAGCAACGATTATCGCAGCAGCCTTGCTGGCCGGGT
GCGGCGGAGGCGGAGGGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTRLKTFRIMFVVLMQALCLLTPGGVRAEGPLVSTGVGFEFASGSYGLGTKTDSIYVPFTLAVYPSERLGFLLEIPYVYQ
SSSAVNTGILLGPGGGQMTGMRKEAAAMPGAGGTMSGTGSGSGGGTSSGSTVSKKSRQGVGDLTLKGGYVLVPEGEFVPR
VRPYLFVKFPTADREQMLGTGEFDEGFAVEFSKQYGNWYSFAEGGYTFQGTSAVLPLKDYFSFNAGTGYQLGERFLPMML
IKAAGAPIEGASDLLELRLKLKMLVGAKSGIDGYIAKGITRSSPDYGVGLAIYHDF

Sequences:

>Translated_296_residues
MTRLKTFRIMFVVLMQALCLLTPGGVRAEGPLVSTGVGFEFASGSYGLGTKTDSIYVPFTLAVYPSERLGFLLEIPYVYQ
SSSAVNTGILLGPGGGQMTGMRKEAAAMPGAGGTMSGTGSGSGGGTSSGSTVSKKSRQGVGDLTLKGGYVLVPEGEFVPR
VRPYLFVKFPTADREQMLGTGEFDEGFAVEFSKQYGNWYSFAEGGYTFQGTSAVLPLKDYFSFNAGTGYQLGERFLPMML
IKAAGAPIEGASDLLELRLKLKMLVGAKSGIDGYIAKGITRSSPDYGVGLAIYHDF
>Mature_295_residues
TRLKTFRIMFVVLMQALCLLTPGGVRAEGPLVSTGVGFEFASGSYGLGTKTDSIYVPFTLAVYPSERLGFLLEIPYVYQS
SSAVNTGILLGPGGGQMTGMRKEAAAMPGAGGTMSGTGSGSGGGTSSGSTVSKKSRQGVGDLTLKGGYVLVPEGEFVPRV
RPYLFVKFPTADREQMLGTGEFDEGFAVEFSKQYGNWYSFAEGGYTFQGTSAVLPLKDYFSFNAGTGYQLGERFLPMMLI
KAAGAPIEGASDLLELRLKLKMLVGAKSGIDGYIAKGITRSSPDYGVGLAIYHDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31302; Mature: 31171

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLKTFRIMFVVLMQALCLLTPGGVRAEGPLVSTGVGFEFASGSYGLGTKTDSIYVPFT
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCEEEEEEE
LAVYPSERLGFLLEIPYVYQSSSAVNTGILLGPGGGQMTGMRKEAAAMPGAGGTMSGTGS
EEECCCCCCCEEEEECEEEECCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCC
GSGGGTSSGSTVSKKSRQGVGDLTLKGGYVLVPEGEFVPRVRPYLFVKFPTADREQMLGT
CCCCCCCCCCCCCHHHHCCCCCEEEECCEEEEECCCCCCCCCCEEEEECCCCCHHHHCCC
GEFDEGFAVEFSKQYGNWYSFAEGGYTFQGTSAVLPLKDYFSFNAGTGYQLGERFLPMML
CCCCCCEEEEEEHHCCCEEEECCCCEEEECCCEEEEHHHHHCCCCCCCHHHHHHHHHHHH
IKAAGAPIEGASDLLELRLKLKMLVGAKSGIDGYIAKGITRSSPDYGVGLAIYHDF
HHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCHHHHCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
TRLKTFRIMFVVLMQALCLLTPGGVRAEGPLVSTGVGFEFASGSYGLGTKTDSIYVPFT
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCEEEEEEE
LAVYPSERLGFLLEIPYVYQSSSAVNTGILLGPGGGQMTGMRKEAAAMPGAGGTMSGTGS
EEECCCCCCCEEEEECEEEECCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCC
GSGGGTSSGSTVSKKSRQGVGDLTLKGGYVLVPEGEFVPRVRPYLFVKFPTADREQMLGT
CCCCCCCCCCCCCHHHHCCCCCEEEECCEEEEECCCCCCCCCCEEEEECCCCCHHHHCCC
GEFDEGFAVEFSKQYGNWYSFAEGGYTFQGTSAVLPLKDYFSFNAGTGYQLGERFLPMML
CCCCCCEEEEEEHHCCCEEEECCCCEEEECCCEEEEHHHHHCCCCCCCHHHHHHHHHHHH
IKAAGAPIEGASDLLELRLKLKMLVGAKSGIDGYIAKGITRSSPDYGVGLAIYHDF
HHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCHHHHCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA