| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is hipO [H]
Identifier: 197118530
GI number: 197118530
Start: 2500418
End: 2501686
Strand: Direct
Name: hipO [H]
Synonym: Gbem_2148
Alternate gene names: 197118530
Gene position: 2500418-2501686 (Clockwise)
Preceding gene: 197118529
Following gene: 197118531
Centisome position: 54.18
GC content: 62.49
Gene sequence:
>1269_bases ATGAACACGAAGACAGCAACTGCCTCGGAGCAAGTCCTGAAAAATCTCGACCGGCTGAACCCCGACCTTGAAACCCTGTA CAAAGACCTGCATGCCCACCCCGAGTTGTCGATGCAAGAGACCCGAACCGCTGCGCTAGCTGCGGACTGGCTTCGCAGAG CAGGTTATGAGGTGACGACCGGCGTAGGAAAGACGGGGGTGGTAGGACTGCTCCGCAACGGAGAAGGGCCGACGGTCATG CTGCGCGCCGACATGGATGCGTTACCCATTGAAGAGGCGACAGGTCTTTCCTACGCGAGTCAAGTGACCGCGACGGATGC GGAAGGGAAGGTCGTGCCGGTCGGACATATGTGCGGCCATGACATGCATGTGGCCTGGCTCGCCGGCGCCGCTGCCTTGT TCGCTCAGGAGTCGGATTCCTGGCAAGGGACGCTGATGGTGGTCTTCCAGCCCGGCGAGGAGACGGCACAGGGCGCCCAG GCCATGATCGACGATAATTTTCTTGCGCGTTTTCCCCGACCAGTTGTCGTACTTGCGCAGCACGTAATGCTCGGAGCGAC CGGCGACATCGCCGGAAGCGCCGGCCCCATCACCTCGGCGGCGGACAGCCTTCAAATCAGGCTGTTCGGTCGTGGTGCAC ACGGATCGATGCCGCAAGCCAGCGTCGATCCCGTTGTCATGGCGGCGGCGACGGTCCTTAGGCTTCAGACTGTCGTTTCG CGCGAGGTGGCCGCGACCGAGGCTGCGGTCGTCACGATCGGCGTTTTGCAAGCCGGCACGAAAGAGAACATAATCCCGGA CGAGGCGATAATAAAGCTGAATGTTCGGACCTTCGATGCCGGCGTTCGTAAGCGCGTGCTGGCGGCGATCGAACGCATCG TCAACGCCGAGGCCGCAGCATCGGGTACCCCCCGGAAACCGGAGATCACGCCGTTAGACCGCTATCCCCTCAACGTGAAT GACGAGGCGGCGAGCCAACGGATCGCCGACGCGTTCCGCGCCCATTTCTCCCCGGCACGCGTGCACCATACCGGACCGGC GCCAGCCAGCGAGGACTTCGGCTGTTTCGGCACGGCCTGGCAGGTTCCGTCGGTCTTCTGGTTCGTTGGCGGCACCGAAA GGGAAACCTATGCAAAGGCCAAAGCGGCTGGAACGCTCAATGAGCTGCCGGTCAACCATAGCCCACAATTTGCCCCCGTG ATCCATCCCACGTTGGAAACCGGTGTCGAGGCACTGGTCGTCGCGGCGCTCGTTTGGCTGGCGCCATAG
Upstream 100 bases:
>100_bases GCAGCGAAGGATCCGAGTAGCAGGAGAACAGACGTGCATTCTCCGCGGGGCTTCTCCGACACTTTGACGTTCGATCTACC ATTATGTGAGGGCGACAGTT
Downstream 100 bases:
>100_bases GGCAAGCCGGTGTTTCGGTGCGGTGAGGGGACCCGCTGCAGCAGGATTTCGAGGAGACGGCAAATGCCAAGTTCGCACAG CTTGGGTTTTGAAATACAAG
Product: metal-dependent amidase/aminoacylase/carboxypeptidase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MNTKTATASEQVLKNLDRLNPDLETLYKDLHAHPELSMQETRTAALAADWLRRAGYEVTTGVGKTGVVGLLRNGEGPTVM LRADMDALPIEEATGLSYASQVTATDAEGKVVPVGHMCGHDMHVAWLAGAAALFAQESDSWQGTLMVVFQPGEETAQGAQ AMIDDNFLARFPRPVVVLAQHVMLGATGDIAGSAGPITSAADSLQIRLFGRGAHGSMPQASVDPVVMAAATVLRLQTVVS REVAATEAAVVTIGVLQAGTKENIIPDEAIIKLNVRTFDAGVRKRVLAAIERIVNAEAAASGTPRKPEITPLDRYPLNVN DEAASQRIADAFRAHFSPARVHHTGPAPASEDFGCFGTAWQVPSVFWFVGGTERETYAKAKAAGTLNELPVNHSPQFAPV IHPTLETGVEALVVAALVWLAP
Sequences:
>Translated_422_residues MNTKTATASEQVLKNLDRLNPDLETLYKDLHAHPELSMQETRTAALAADWLRRAGYEVTTGVGKTGVVGLLRNGEGPTVM LRADMDALPIEEATGLSYASQVTATDAEGKVVPVGHMCGHDMHVAWLAGAAALFAQESDSWQGTLMVVFQPGEETAQGAQ AMIDDNFLARFPRPVVVLAQHVMLGATGDIAGSAGPITSAADSLQIRLFGRGAHGSMPQASVDPVVMAAATVLRLQTVVS REVAATEAAVVTIGVLQAGTKENIIPDEAIIKLNVRTFDAGVRKRVLAAIERIVNAEAAASGTPRKPEITPLDRYPLNVN DEAASQRIADAFRAHFSPARVHHTGPAPASEDFGCFGTAWQVPSVFWFVGGTERETYAKAKAAGTLNELPVNHSPQFAPV IHPTLETGVEALVVAALVWLAP >Mature_422_residues MNTKTATASEQVLKNLDRLNPDLETLYKDLHAHPELSMQETRTAALAADWLRRAGYEVTTGVGKTGVVGLLRNGEGPTVM LRADMDALPIEEATGLSYASQVTATDAEGKVVPVGHMCGHDMHVAWLAGAAALFAQESDSWQGTLMVVFQPGEETAQGAQ AMIDDNFLARFPRPVVVLAQHVMLGATGDIAGSAGPITSAADSLQIRLFGRGAHGSMPQASVDPVVMAAATVLRLQTVVS REVAATEAAVVTIGVLQAGTKENIIPDEAIIKLNVRTFDAGVRKRVLAAIERIVNAEAAASGTPRKPEITPLDRYPLNVN DEAASQRIADAFRAHFSPARVHHTGPAPASEDFGCFGTAWQVPSVFWFVGGTERETYAKAKAAGTLNELPVNHSPQFAPV IHPTLETGVEALVVAALVWLAP
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=337, Percent_Identity=24.9258160237389, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 44710; Mature: 44710
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKTATASEQVLKNLDRLNPDLETLYKDLHAHPELSMQETRTAALAADWLRRAGYEVTT CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEC GVGKTGVVGLLRNGEGPTVMLRADMDALPIEEATGLSYASQVTATDAEGKVVPVGHMCGH CCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHCCCCHHHHEEECCCCCCEEEEHHHCCC DMHVAWLAGAAALFAQESDSWQGTLMVVFQPGEETAQGAQAMIDDNFLARFPRPVVVLAQ CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHCCCHHHHHHH HVMLGATGDIAGSAGPITSAADSLQIRLFGRGAHGSMPQASVDPVVMAAATVLRLQTVVS HHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH REVAATEAAVVTIGVLQAGTKENIIPDEAIIKLNVRTFDAGVRKRVLAAIERIVNAEAAA HHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHC SGTPRKPEITPLDRYPLNVNDEAASQRIADAFRAHFSPARVHHTGPAPASEDFGCFGTAW CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCC QVPSVFWFVGGTERETYAKAKAAGTLNELPVNHSPQFAPVIHPTLETGVEALVVAALVWL CCCEEEEEECCCCHHHHHHHHHCCCHHHCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHH AP CC >Mature Secondary Structure MNTKTATASEQVLKNLDRLNPDLETLYKDLHAHPELSMQETRTAALAADWLRRAGYEVTT CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEC GVGKTGVVGLLRNGEGPTVMLRADMDALPIEEATGLSYASQVTATDAEGKVVPVGHMCGH CCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHCCCCHHHHEEECCCCCCEEEEHHHCCC DMHVAWLAGAAALFAQESDSWQGTLMVVFQPGEETAQGAQAMIDDNFLARFPRPVVVLAQ CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHCCCHHHHHHH HVMLGATGDIAGSAGPITSAADSLQIRLFGRGAHGSMPQASVDPVVMAAATVLRLQTVVS HHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH REVAATEAAVVTIGVLQAGTKENIIPDEAIIKLNVRTFDAGVRKRVLAAIERIVNAEAAA HHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHC SGTPRKPEITPLDRYPLNVNDEAASQRIADAFRAHFSPARVHHTGPAPASEDFGCFGTAW CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCC QVPSVFWFVGGTERETYAKAKAAGTLNELPVNHSPQFAPVIHPTLETGVEALVVAALVWL CCCEEEEEECCCCHHHHHHHHHCCCHHHCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHH AP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]