Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118525

Identifier: 197118525

GI number: 197118525

Start: 2495176

End: 2496108

Strand: Direct

Name: 197118525

Synonym: Gbem_2143

Alternate gene names: NA

Gene position: 2495176-2496108 (Clockwise)

Preceding gene: 308535290

Following gene: 197118527

Centisome position: 54.06

GC content: 51.77

Gene sequence:

>933_bases
ATGAGAAGAATTAAAGCAACCTTTGTCTCTGCCGCTATTCTCACTCTAACACTGGCTGGATGTGGCGGTGGTGGTGGCTC
CAGTACACCGACAGTATCGGGAGTTGCGGCCACAGGCATGCCTATGAGCGGGACTGTATTCCTAAAGGATTCCGCCAACA
GTGAGACGAACACGACAATAAATCCGCAAACCGGCAGCTTTTCGTTCAACGTCAGCGGCAAAACCCCTCCGTTCATGCTG
CGGGCTGGTGCATTGTACTCTATGAGTGCAGGGGCTGGGACTGCCAACATAAACCCCGCGACAACGCTCATGGTCGCCAA
TATGGGAAGCTTCACTAATATGTCGTCCCTAAACAGCTTCTACAGATCGCCCAATTCAACGACCATGGTTTCGATGATGG
CTAGTGAGCCTGCATCGTATCAGCAATTCCAGCAGAAAATGGTACCGCTCCTGAACCAGTACGGTGCGACGAACATGGAT
CCCATGACGGGATCTTTCACCATCGGGCAAGGTTTAGACAAGATGTTCGATGACGTGAAAATGACCATAGATAATAATGG
AAACGTCAGCATGATGTACGCCAATGGCACCGCAGTATTCACTGGCCCCATGGGTAATATGGCAGCCGGCACCATGATGT
CTGGAAATATAGTTATGCCTGGTACCGCGCCCACATCAAGCGCGATAGCTGTATCACCGTCAACGATCAGACTGCAGGTG
GGTGGTGCGCAACAGTTCACAGCAAGTGTTCCAGTTACTTGGTCGGTCATCACCGCCAACGGCGGCAGCATCTCTTCCAC
AGGGCTTTACACGGCCCCAAGTTCGGCGGGGATTTTCATGGTCAAGGCAACAAGCATCGCGGACCCGACTAAGTCCACCA
TGGTAATGATCCAGGTCGGAAATACAGGAATGGTTATGATGAAGATGTCATGA

Upstream 100 bases:

>100_bases
TTCCGGCATATTAATCCTGGAGGGCCTTGATCCACCCACTCAACTGGATATACTAACCTTTGCTAAAAACTTCCGAAAAT
TTCACAAAGGAGATCACATC

Downstream 100 bases:

>100_bases
TCGGGTTGTGAAGGGAAGGCAACGGTGTGTGCACTGTACAACTTATGGCGCACACACCGTTTTTAGGTTAATTGGTCAAG
ACGCCGATGCAATTGCGAAA

Product: lipoprotein

Products: NA

Alternate protein names: Lipoprotein Cytochrome C; Fibronectin Type III Domain-Containing Protein; Fibronectin Type III Domain Protein; Lipoprotein

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MRRIKATFVSAAILTLTLAGCGGGGGSSTPTVSGVAATGMPMSGTVFLKDSANSETNTTINPQTGSFSFNVSGKTPPFML
RAGALYSMSAGAGTANINPATTLMVANMGSFTNMSSLNSFYRSPNSTTMVSMMASEPASYQQFQQKMVPLLNQYGATNMD
PMTGSFTIGQGLDKMFDDVKMTIDNNGNVSMMYANGTAVFTGPMGNMAAGTMMSGNIVMPGTAPTSSAIAVSPSTIRLQV
GGAQQFTASVPVTWSVITANGGSISSTGLYTAPSSAGIFMVKATSIADPTKSTMVMIQVGNTGMVMMKMS

Sequences:

>Translated_310_residues
MRRIKATFVSAAILTLTLAGCGGGGGSSTPTVSGVAATGMPMSGTVFLKDSANSETNTTINPQTGSFSFNVSGKTPPFML
RAGALYSMSAGAGTANINPATTLMVANMGSFTNMSSLNSFYRSPNSTTMVSMMASEPASYQQFQQKMVPLLNQYGATNMD
PMTGSFTIGQGLDKMFDDVKMTIDNNGNVSMMYANGTAVFTGPMGNMAAGTMMSGNIVMPGTAPTSSAIAVSPSTIRLQV
GGAQQFTASVPVTWSVITANGGSISSTGLYTAPSSAGIFMVKATSIADPTKSTMVMIQVGNTGMVMMKMS
>Mature_310_residues
MRRIKATFVSAAILTLTLAGCGGGGGSSTPTVSGVAATGMPMSGTVFLKDSANSETNTTINPQTGSFSFNVSGKTPPFML
RAGALYSMSAGAGTANINPATTLMVANMGSFTNMSSLNSFYRSPNSTTMVSMMASEPASYQQFQQKMVPLLNQYGATNMD
PMTGSFTIGQGLDKMFDDVKMTIDNNGNVSMMYANGTAVFTGPMGNMAAGTMMSGNIVMPGTAPTSSAIAVSPSTIRLQV
GGAQQFTASVPVTWSVITANGGSISSTGLYTAPSSAGIFMVKATSIADPTKSTMVMIQVGNTGMVMMKMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31807; Mature: 31807

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
9.7 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
9.7 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIKATFVSAAILTLTLAGCGGGGGSSTPTVSGVAATGMPMSGTVFLKDSANSETNTTI
CCCCHHHHHHHEEEEEEEECCCCCCCCCCCEECCEEECCCCCCCEEEEECCCCCCCCCEE
NPQTGSFSFNVSGKTPPFMLRAGALYSMSAGAGTANINPATTLMVANMGSFTNMSSLNSF
CCCCCCEEEEECCCCCCEEEECCCEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH
YRSPNSTTMVSMMASEPASYQQFQQKMVPLLNQYGATNMDPMTGSFTIGQGLDKMFDDVK
HCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHCCHHHHHCCEE
MTIDNNGNVSMMYANGTAVFTGPMGNMAAGTMMSGNIVMPGTAPTSSAIAVSPSTIRLQV
EEEECCCCEEEEEECCEEEEECCCCCCCCCEEEECCEEECCCCCCCCEEEECCCEEEEEE
GGAQQFTASVPVTWSVITANGGSISSTGLYTAPSSAGIFMVKATSIADPTKSTMVMIQVG
CCCCEEEEECCEEEEEEEECCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCEEEEEEEC
NTGMVMMKMS
CCCEEEEEEC
>Mature Secondary Structure
MRRIKATFVSAAILTLTLAGCGGGGGSSTPTVSGVAATGMPMSGTVFLKDSANSETNTTI
CCCCHHHHHHHEEEEEEEECCCCCCCCCCCEECCEEECCCCCCCEEEEECCCCCCCCCEE
NPQTGSFSFNVSGKTPPFMLRAGALYSMSAGAGTANINPATTLMVANMGSFTNMSSLNSF
CCCCCCEEEEECCCCCCEEEECCCEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH
YRSPNSTTMVSMMASEPASYQQFQQKMVPLLNQYGATNMDPMTGSFTIGQGLDKMFDDVK
HCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHCCHHHHHCCEE
MTIDNNGNVSMMYANGTAVFTGPMGNMAAGTMMSGNIVMPGTAPTSSAIAVSPSTIRLQV
EEEECCCCEEEEEECCEEEEECCCCCCCCCEEEECCEEECCCCCCCCEEEECCCEEEEEE
GGAQQFTASVPVTWSVITANGGSISSTGLYTAPSSAGIFMVKATSIADPTKSTMVMIQVG
CCCCEEEEECCEEEEEEEECCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCEEEEEEEC
NTGMVMMKMS
CCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA