| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 308535290
Identifier: 308535290
GI number: 308535290
Start: 2493617
End: 2494147
Strand: Direct
Name: 308535290
Synonym: NA
Alternate gene names: NA
Gene position: 2493617-2494147 (Clockwise)
Preceding gene: 197118523
Following gene: 197118525
Centisome position: 54.03
GC content: 54.43
Gene sequence:
>531_bases ATGGCTTCTAATCTATCTACGATCAAGAAAGCTGGACTTGGTCGCCCTCCCCTTGCGCCTCAATCAATGACCGTTGACAT TGATCGGGCGCTTTCGCAGTTGAACACAGCGTTCAACCCGTTGCACCAAGACTTTGCCTTAGACTTTCACGTCCAGGGCG CCAAAAACGGCTATGTTTACCTGTCCATCGCTTTGCCCGAAGAAATGACCCGCTTCTTTGTCCAACTGCTGGAGTCGATG CACGGCTTTTTCCGTTGCATGGACATCAAGGCCCGAGCCGCTGTCGCAGTCAGGAAAGCTGCCGATCCCTTCGCGATCAT GGAGGCCGAGGAGCGGCACGAGGCGTTTAAGGAAAAGGTCTGTTCCGTGTTCGATGCTTTTAGGGGTCAGGGGATGGAGT CAAAACAGGCGATCAGCCGAACGAACGAGGCCCTTAAGGCCGAAAATTGCCCTTGGGCCACCTACGAGACTATCGTGGGT ATCCTGAGAAGCTCAGGACGCTTCAGGAAGCTGAGGCGTTCAAGGGACTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
NA
Sequences:
>Translated_176_residues MASNLSTIKKAGLGRPPLAPQSMTVDIDRALSQLNTAFNPLHQDFALDFHVQGAKNGYVYLSIALPEEMTRFFVQLLESM HGFFRCMDIKARAAVAVRKAADPFAIMEAEERHEAFKEKVCSVFDAFRGQGMESKQAISRTNEALKAENCPWATYETIVG ILRSSGRFRKLRRSRD >Mature_175_residues ASNLSTIKKAGLGRPPLAPQSMTVDIDRALSQLNTAFNPLHQDFALDFHVQGAKNGYVYLSIALPEEMTRFFVQLLESMH GFFRCMDIKARAAVAVRKAADPFAIMEAEERHEAFKEKVCSVFDAFRGQGMESKQAISRTNEALKAENCPWATYETIVGI LRSSGRFRKLRRSRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19804; Mature: 19673
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNLSTIKKAGLGRPPLAPQSMTVDIDRALSQLNTAFNPLHQDFALDFHVQGAKNGYVY CCCCHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEE LSIALPEEMTRFFVQLLESMHGFFRCMDIKARAAVAVRKAADPFAIMEAEERHEAFKEKV EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH CSVFDAFRGQGMESKQAISRTNEALKAENCPWATYETIVGILRSSGRFRKLRRSRD HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure ASNLSTIKKAGLGRPPLAPQSMTVDIDRALSQLNTAFNPLHQDFALDFHVQGAKNGYVY CCCHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEE LSIALPEEMTRFFVQLLESMHGFFRCMDIKARAAVAVRKAADPFAIMEAEERHEAFKEKV EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH CSVFDAFRGQGMESKQAISRTNEALKAENCPWATYETIVGILRSSGRFRKLRRSRD HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA