Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118449

Identifier: 197118449

GI number: 197118449

Start: 2385105

End: 2386427

Strand: Direct

Name: 197118449

Synonym: Gbem_2067

Alternate gene names: NA

Gene position: 2385105-2386427 (Clockwise)

Preceding gene: 197118448

Following gene: 197118450

Centisome position: 51.68

GC content: 65.53

Gene sequence:

>1323_bases
ATGTGCCAGCGTCTTTCGCTACGGGGAGCTCTCCTCGGCTCCCTCATGCTTTGCCTTTTGCTATTCCAACCGCAGCAGTC
TCTGGCCGCGCCGCTACTCTCGTTGATCCCAGCCGGAAGCGGCTCATTCGTACTTCAGGGGACCGGCTTCAGCAACGTCG
CAGGCATCGACCTCACCATCACCTACGACAGCTCCAGGCTTTCGAACCCGCGCCTGACCCAGGGGCCGCTAGCCAGGGGT
GCAGTCACAGCGCTCAACCGCAACGACGCCGGCACCCTGTTGGTTTCGATCATCGGCGCCCCTGCCATCAACGGCAACGG
CCCGGTCGCCACGGTACTCTTCGATCAGCAGGGGGGGGGCACCGGGCAAATCAGCGCCAGGGGGAGCATCATCGACACGC
TTGGGTCGAAACAGGCGGTTCTGATTTTTGCCGGAAGCAGCACAGACACGGTGCAGCCACCCGCTACACCCGCCCCGAGC
GCTCCGGCGTCCCCTGCTTCCAATCACGATCAGCCCGGGGTCGGCGAAAACGACGGAGTTGCCGATCCCGGCACGACTCC
GGCGCGAACCGGCGCAAGGATTCTCGGCGGGAGCGTCTCGCTTCCCGCAGCCGAAGCACCTGCCTTATCGGGAGGAGGAG
TAAACCCCAGCGGCGCGATCCAGGATAGGGATGCGCCGCTCGCGCCGGCCGAGATCCAGCAGACGCCGACTGTCGGCCGG
CCCCCGGTTGAAAAAGCTACGGCGGATCCCGCCCAGCCGGACAACGCGCCGGCGGCAGATCCTGCTCCCGCTGCGCCCAT
AGAGGCGGCGAGCGTGCTGGAGCGCTTCCGCACCTACACGGGGCAAAGGAGCGCCGCCGGCTTCATCTCGCTCTTCGCCC
CGGGGATGAACCAGTGCTTTCGCCAGGAACCGGCGGTCGGGATCAGCACCCCGGGTTCCATCCTTGCCCTGACCATCCCC
CGCAGCGGCGACAAGGCGCCCAACTTCGCCTTCCAGGGGTGCCAGGCGGTCTCTTTCCGGGCCGGGGAGGATGGCTGGGT
CCTGGAGGTGAAACCTGATGTCGGTGCCGAGAGCGCACTGGTGGTAATGCTCTTTGACGGTATTCGGCAATGCCCTCTCG
CGTTGGCGCCAGCCGCGGACGTGGACCTCGACGGCTCAGGGAAGGTCACCGAGGCCGACTTCGAGGCCTACCTGAAACCG
GTCAAAGGGGAGGCGGCGATAAAGAGGCGCGACCTGAACGGGGACGGGCGCCTCGATTACCGCGACGATTACATCTTCAC
CGCCAATTACCTAGCCGCCATGAGCAAAGTCGGCAAAAAATAG

Upstream 100 bases:

>100_bases
ACAAAGCAACCCCAGCCGGGGAGGGGGAAGCCCCTCCCCGGACTGCTGCCGCCGGGCTCATCTCGCGGCAGCACGGCAAT
TTCTTTCCTGCGAGGTCCTC

Downstream 100 bases:

>100_bases
ATCCTTCGCCAAAGGGGACAGGCTACTTTTTTTGGAAAAAAGTAGCCTGTCCCCCTTCTCCTCGCCTCTCCCCTTGTTCC
CAGGCTCCAGCTTGGGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MCQRLSLRGALLGSLMLCLLLFQPQQSLAAPLLSLIPAGSGSFVLQGTGFSNVAGIDLTITYDSSRLSNPRLTQGPLARG
AVTALNRNDAGTLLVSIIGAPAINGNGPVATVLFDQQGGGTGQISARGSIIDTLGSKQAVLIFAGSSTDTVQPPATPAPS
APASPASNHDQPGVGENDGVADPGTTPARTGARILGGSVSLPAAEAPALSGGGVNPSGAIQDRDAPLAPAEIQQTPTVGR
PPVEKATADPAQPDNAPAADPAPAAPIEAASVLERFRTYTGQRSAAGFISLFAPGMNQCFRQEPAVGISTPGSILALTIP
RSGDKAPNFAFQGCQAVSFRAGEDGWVLEVKPDVGAESALVVMLFDGIRQCPLALAPAADVDLDGSGKVTEADFEAYLKP
VKGEAAIKRRDLNGDGRLDYRDDYIFTANYLAAMSKVGKK

Sequences:

>Translated_440_residues
MCQRLSLRGALLGSLMLCLLLFQPQQSLAAPLLSLIPAGSGSFVLQGTGFSNVAGIDLTITYDSSRLSNPRLTQGPLARG
AVTALNRNDAGTLLVSIIGAPAINGNGPVATVLFDQQGGGTGQISARGSIIDTLGSKQAVLIFAGSSTDTVQPPATPAPS
APASPASNHDQPGVGENDGVADPGTTPARTGARILGGSVSLPAAEAPALSGGGVNPSGAIQDRDAPLAPAEIQQTPTVGR
PPVEKATADPAQPDNAPAADPAPAAPIEAASVLERFRTYTGQRSAAGFISLFAPGMNQCFRQEPAVGISTPGSILALTIP
RSGDKAPNFAFQGCQAVSFRAGEDGWVLEVKPDVGAESALVVMLFDGIRQCPLALAPAADVDLDGSGKVTEADFEAYLKP
VKGEAAIKRRDLNGDGRLDYRDDYIFTANYLAAMSKVGKK
>Mature_440_residues
MCQRLSLRGALLGSLMLCLLLFQPQQSLAAPLLSLIPAGSGSFVLQGTGFSNVAGIDLTITYDSSRLSNPRLTQGPLARG
AVTALNRNDAGTLLVSIIGAPAINGNGPVATVLFDQQGGGTGQISARGSIIDTLGSKQAVLIFAGSSTDTVQPPATPAPS
APASPASNHDQPGVGENDGVADPGTTPARTGARILGGSVSLPAAEAPALSGGGVNPSGAIQDRDAPLAPAEIQQTPTVGR
PPVEKATADPAQPDNAPAADPAPAAPIEAASVLERFRTYTGQRSAAGFISLFAPGMNQCFRQEPAVGISTPGSILALTIP
RSGDKAPNFAFQGCQAVSFRAGEDGWVLEVKPDVGAESALVVMLFDGIRQCPLALAPAADVDLDGSGKVTEADFEAYLKP
VKGEAAIKRRDLNGDGRLDYRDDYIFTANYLAAMSKVGKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44887; Mature: 44887

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQRLSLRGALLGSLMLCLLLFQPQQSLAAPLLSLIPAGSGSFVLQGTGFSNVAGIDLTI
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEE
TYDSSRLSNPRLTQGPLARGAVTALNRNDAGTLLVSIIGAPAINGNGPVATVLFDQQGGG
EECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCC
TGQISARGSIIDTLGSKQAVLIFAGSSTDTVQPPATPAPSAPASPASNHDQPGVGENDGV
CEEEEECCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADPGTTPARTGARILGGSVSLPAAEAPALSGGGVNPSGAIQDRDAPLAPAEIQQTPTVGR
CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
PPVEKATADPAQPDNAPAADPAPAAPIEAASVLERFRTYTGQRSAAGFISLFAPGMNQCF
CCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEECCCCHHHHH
RQEPAVGISTPGSILALTIPRSGDKAPNFAFQGCQAVSFRAGEDGWVLEVKPDVGAESAL
HCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCEEEEEECCCCCEEEEECCCCCCCCEE
VVMLFDGIRQCPLALAPAADVDLDGSGKVTEADFEAYLKPVKGEAAIKRRDLNGDGRLDY
EEEEHHHHHHCCEEECCCCCCCCCCCCCEEHHHHHHHHCCCCCCHHEEECCCCCCCCEEE
RDDYIFTANYLAAMSKVGKK
CCCEEEEHHHHHHHHHHCCC
>Mature Secondary Structure
MCQRLSLRGALLGSLMLCLLLFQPQQSLAAPLLSLIPAGSGSFVLQGTGFSNVAGIDLTI
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEE
TYDSSRLSNPRLTQGPLARGAVTALNRNDAGTLLVSIIGAPAINGNGPVATVLFDQQGGG
EECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCC
TGQISARGSIIDTLGSKQAVLIFAGSSTDTVQPPATPAPSAPASPASNHDQPGVGENDGV
CEEEEECCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADPGTTPARTGARILGGSVSLPAAEAPALSGGGVNPSGAIQDRDAPLAPAEIQQTPTVGR
CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
PPVEKATADPAQPDNAPAADPAPAAPIEAASVLERFRTYTGQRSAAGFISLFAPGMNQCF
CCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEECCCCHHHHH
RQEPAVGISTPGSILALTIPRSGDKAPNFAFQGCQAVSFRAGEDGWVLEVKPDVGAESAL
HCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCEEEEEECCCCCEEEEECCCCCCCCEE
VVMLFDGIRQCPLALAPAADVDLDGSGKVTEADFEAYLKPVKGEAAIKRRDLNGDGRLDY
EEEEHHHHHHCCEEECCCCCCCCCCCCCEEHHHHHHHHCCCCCCHHEEECCCCCCCCEEE
RDDYIFTANYLAAMSKVGKK
CCCEEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA